Mytilus californianus (California mussel): 127709182
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Entry
127709182 CDS
T08804
Name
(RefSeq) DNA topoisomerase 3-alpha-like isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03440
Homologous recombination
mcaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127709182
03460 Fanconi anemia pathway
127709182
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127709182
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127709182
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
127709182
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Topoisomerases
127709182
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
127709182
FA (Fanconi anemia) pathway
127709182
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Zn_ribbon_recom
YhfH
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
127709182
NCBI-ProteinID:
XP_052070509
LinkDB
All DBs
Position
Unknown
AA seq
1066 aa
AA seq
DB search
MYALKIIQRHFSSEVNGKSMVRILNVAEKNDAAKSIANVLSRGSSRKREGFSKFNKIYEF
EYNILNMNNCTMSMTSLSGHLLEMDFIGQYRKWYSCSPVTLFDVPVEKHCHPNMVDIKRT
LEREIRGCQHLIIWTDCDREGENIGFEAIQVCKAVKPNIPVYRAKFSEITPQAIARACSN
LIRPDKNVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPDVLADQLISYGSCQFPTMGFV
VERYKQVQAFIPEPFWKLKVSHSHEDGDCEFTWKRNRLFDHLACLVLYTHCIENPVAKVV
DVKSKTKSKWRPTALDTVEMEKLASRKLRINAKETMKIAEKLYTQGFISYPRTETNMFPK
ELDLQKLVEDQTRDNNWGDFARRVLENGPNPRNGNKTDQAHPPIHPTKYTDNLQGNEKRV
YEFVVRHFLACVSQDAQGFETTVEIDIANEKFTAQGLMITAKNYLEVYIYDKWNAKVIPV
YNKGDTFQPNSIEMVASETSPPSLLTEADLIALMDKHGIGTDATHADHIETIKSRMYVGV
KPDGKFVPGQLGMGLVEGYDSMGYQMSKPNLRAELEADLKRICEGRKNKDEVLQQQVAKY
KEVFVEACRQAIKLDTALSTYLGEAQNLPVEDVLNIMASLPVKKCPNCGQDMTLKTKKDG
KGHYIGCMGYPACKSAIWLPDFVLEATVDESVCQRCLPNEIKNIKFKFKRGSVPPMVPTE
YTGCIGGCDEMLNEALNLSANRPVRPSSVSTQRPSNNTSLNTSIPDSGYGSSGPSRSYST
QSSSNQTQNSYQRNTNQRQPFQQNNSPFQRGQRQNRNDSSYVPNSFSSPSMNNPRGSENQ
NRGDNSRVPLLPVQPFNRSAAGGQSDGSNSVVCNCGEDGVLLTVRKEGPNTGRQFYKCGG
SKCSFFLWADEAGGSRNDTSGSSSGYGGRGGNSYRGNDSGFSSTQRSYPNTTNTSEVPCC
KCGNPGKSLTVQKDGPNKGRQFYGCSKPRGEGCNFFQWADENSGTSGNWGSGGGGGNDGW
GGGSNRGGGGKKRGASSTSNEPGAKRARKCGLCGVEGHTKKTCPHK
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgtatgccctaaaaataattcaacgccatttcagttctgaagtaaatggaaaaagtatg
gttagaatcttaaatgttgctgagaaaaatgatgctgcaaaatcaattgcaaatgttctg
tcaagaggaagttccaggaagcgagaaggattttcaaaattcaacaaaatatatgaattt
gaatacaacattctgaatatgaacaactgtacaatgtcaatgacaagtttatcaggacat
ttgttggaaatggatttcataggccaatacagaaaatggtatagctgcagtcctgttact
ttatttgatgtaccagtagaaaaacattgtcatccaaacatggtcgacataaagagaaca
ttagaacgtgaaataagaggttgccagcatttaattatatggacagattgtgacagagaa
ggagaaaacattggttttgaagcaatccaagtctgtaaagcagttaagcctaatattcca
gtttacagagcaaaattttcagaaataacaccacaagcaatagcaagagcatgtagtaat
ttaattcgaccagataaaaatgttagtgatgcagttgatgttagacaagagcttgacttg
agaataggtgcttcttttacccgattccagactttacgtctacagaaaatctttcctgat
gtattagcagaccagttaattagttatggtagttgtcagtttcctactatgggctttgtt
gtagagagatataaacaagttcaggcttttataccagaaccattctggaaattaaaagtt
tctcatagccatgaagatggagattgtgaatttacatggaaaagaaatcgtctttttgac
catcttgcttgcctggtgctgtacacacattgcattgagaatccagttgctaaagtagta
gatgttaaatctaaaacaaaaagtaaatggaggccaacagctttagatacagtagaaatg
gaaaagttagcatcaaggaaattgaggattaatgccaaagaaacaatgaagattgcagag
aagttgtatacacagggatttataagttatcctcgtacagaaacaaatatgtttcctaaa
gaattagatttacagaaattagtagaggatcaaacaagggataataactggggagatttt
gcaagaagagttttagaaaatggtcctaatccaaggaatggtaataaaactgaccaggcc
catcccccaatacacccaacaaagtacacagataatttacagggaaatgaaaagagagta
tatgaatttgttgttcgacatttcttagcatgtgtttcccaggatgcacaggggtttgag
acaactgttgaaattgatatagctaatgaaaagtttacagcccaaggattaatgataaca
gccaagaattatctggaagtttatatttatgacaaatggaatgccaaggttattcctgtt
tataacaaaggagatacattccaaccaaactctattgagatggttgccagtgaaacaagt
cctccatctttactgacagaagctgaccttatagcattgatggataaacatggaatagga
acagatgcaacacatgctgatcatatagaaaccattaaaagtagaatgtatgtaggtgtg
aaaccagatgggaaatttgttccaggacagctaggaatgggactagttgaaggttatgat
tccatgggatatcagatgtccaaaccaaatttacgtgcagaactggaggctgatcttaaa
aggatttgtgaaggaaggaagaataaggatgaggttttacagcaacaagtagcaaaatac
aaagaagtgtttgtggaagcctgtagacaggccattaaattagatacagcattgtcaaca
tatttgggtgaagctcagaatttgcctgttgaagatgttctgaatattatggcctcttta
ccagtgaagaaatgtccaaattgtggtcaggatatgacattgaaaacaaagaaagatgga
aaaggacattacataggttgtatgggttatcctgcatgtaagagtgctatatggttacct
gactttgtactagaagcaacagtcgatgaatcagtttgtcaaaggtgtttaccaaatgaa
ataaagaatatcaagtttaagtttaaaagaggatcagttcctccaatggttccaacagag
tatactggttgtataggaggatgtgatgaaatgttaaatgaagcacttaacttatcagca
aatcgcccagtaagaccatcaagtgtttcaacacaaagacctagtaacaacacttcactg
aatacatctataccagatagtggatatggtagttcaggaccttcacgttcatattctacc
cagagttcatcaaatcaaacacaaaattcttatcaaagaaacaccaatcaaagacaacca
tttcagcagaataatagcccctttcaaagaggacaaagacaaaacagaaatgatagttct
tatgtgcctaatagtttcagtagcccctcaatgaataatccaagaggaagtgaaaatcag
aataggggagataactcacgagtgcctctattgccagtacaaccatttaatagaagtgct
gctggtggacagtctgatggttccaattctgttgtatgtaactgtggtgaagatggagtt
ttgttaacagtcagaaaagaaggtccaaatacaggaagacagttttataaatgtggtggt
tctaagtgttcattttttctttgggctgatgaggctgggggaagcagaaatgatacctct
ggctcaagtagtgggtatggaggaaggggaggtaactcatatagaggaaatgattcaggt
ttttcatcaacacaaagaagttatcctaatacaacgaatacaagtgaagttccttgttgt
aaatgtggcaaccctggcaaaagtttaacagttcagaaagatggaccaaataaagggaga
caattctatggctgttctaaacctagaggtgaaggatgtaacttttttcaatgggcagat
gaaaattcaggtaccagtggaaactgggggagtggaggagggggaggtaatgatggatgg
ggaggagggagtaacagaggaggagggggaaagaaacgaggagcaagttctacttcaaat
gaacctggtgcaaagagagctaggaaatgtgggctgtgtggtgtggaaggacacacaaag
aagacctgtccacacaaatag
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