Mytilus californianus (California mussel): 127709326
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Entry
127709326 CDS
T08804
Name
(RefSeq) DNA excision repair protein ERCC-6-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
127709326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127709326
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127709326
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
127709326
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
127709326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
ResIII
Motif
Other DBs
NCBI-GeneID:
127709326
NCBI-ProteinID:
XP_052070750
LinkDB
All DBs
Position
Unknown
AA seq
1538 aa
AA seq
DB search
MNILISKMEKKIISGHLNEPSAMETDQHQDSTEKEKAKSFHVNRDLIPVAHLDDQAFDEL
KNLGLDVFNQEDFEEGVMAQVGEVLAKEEEDRNKKVLEKDLRAVEFDIKNVEKELKQVTT
VLSSLNTGVTSAFVQKRLLTVKKQKENKSNQLMSLKAKEKSLKKKLGLNIQESEEEEEGE
ITDNSPDLNKVLGLSKAPSDETEQERMIRTGEMTPFGTIVPADRSPDKKTNTREERKMEA
IMKAFEKMDKNQRRKRESLISKLPRRDSSEIEEDSKKIFPDTKGRRKARSDEEGSLSPSK
SPRALVKSKSDGAMDKRLCKMEDLLDDEVCDDEGDEYKPDFKEQSESEDSGLDNTEKKKK
LKKRIPIKPRRPPKYIDSDDEKVDKEEGGKQKLSREKSLRTTDDGDDYSFDKRIRDFNKA
ERKKQDLRAAGELSESEEDEEMEGGFKVPGRIWSKLFKYQKVGVKWLWELHCQQAGGIIG
DEMGLGKTIQAIGFLAGLRQSKIRDKHFLFRGLGPTIIVTPTTVMHQWVKEFHKWWPLFR
VAILHSSGSYTCKEAELIRTIVKENGVLVTSYSTLVIHQELIISYNWHYIILDEGHKIRN
PDAQATLAVKQIKSPHRIILSGSPIQNNLKELWSLFDFIFPGKLGTLPDFMAHFAVPIVQ
GGYSNASQQQVQTAYKCACVLRDTINPYMIRRMKADLKINLPSKNEQVLFCRLTQEQRET
YMEYLQSRECQSILSGKYQIFSGLITLRKICNHPDICTGGPKLYIGETPGNDESLEYGYY
KRSGKMIVVEALLRLWKKQGHKVLLFSQSTVMLDILERFVAKPKYSYLRMDGSTPISTRQ
PLVNQFNKDDSIFLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDTQARERTWRIGQTR
QVTVYRLVTTGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKANDLYELFDLNVDCKEGT
ETGALFAGTGSEVSKADVRRRVKQHKLNRFDLMKERQKAQKESESKETAKDEDDMDDVKK
NFNEDEVNRMKEIAKRLSQQIMTGMFKKPNETTDQNSIGEEKSEENSNGSVLIKENLDDI
KNNVVDCGEECSESKQTIDLSPKHSGIVCDDEQPSTSKTSLSVGSKTTSMLKEMLIAGKQ
SDLQTHSFSTSERQHKHSSSSVGHHKSHRGRTHSHSNAEGKHKVSHGEHKHSESHGQHKH
SQSHGKHKHSLSNSPHKHRHSSHKESKHSSENGKDRHRKDKKRRRKDAKCEGERIPNLVK
SDTYTPAADEEEEIDREKEHAAQDDYVLQKLFKKNGIQGALKHDVIMDPSKHDYMIVEAE
ADRVATEAVKALKRSRSQCLGAMSGVPNWTGQHGTMAKKPRFGQKKNTQLLETVVQTTSS
DVQKMKKIEKGEFSGEKSLFDGTKAGSVVINTDTGSSAPEVMTSDELLTRMRRRNVVSGN
TTATTSTGAENDEVNQQDDDSSTPIVDDDSFKLITEIRNFIMFECHSMCKAMTQEILDEF
GPRLPPAETAKFKSMLKSICDFEKVDGIGYWKLKNSFR
NT seq
4617 nt
NT seq
+upstream
nt +downstream
nt
atgaatatactgatttccaaaatggaaaagaaaataatttctggacacttaaatgagcca
tcagccatggagacagatcagcatcaagattcaacagagaaagagaaagctaaaagcttt
catgtcaacagagatttaatacctgttgcacatttagatgaccaagcatttgatgaactt
aaaaatttaggactagatgtatttaaccaagaggattttgaagaaggtgttatggcacaa
gtaggagaggtgttggcaaaagaagaggaagacagaaacaagaaagttttagagaaggat
cttagggctgttgaatttgacataaagaatgttgaaaaagagttgaaacaggtaacaaca
gttttatcttccttgaatactggtgtcacatctgcttttgtacagaaaagattgttaact
gtaaagaaacagaaggaaaataagtcaaaccaattgatgtctttgaaagcaaaagagaaa
tctttgaagaagaagcttggacttaacattcaggagtctgaggaagaggaggaaggggaa
ataactgataacagtcctgacttaaataaagtgctaggactttcaaaggctccttcagat
gaaactgaacaagaaagaatgatcagaacaggggagatgactccatttggtacaattgtt
cctgcagacagatcaccagataagaaaaccaatactagagaggaaaggaaaatggaagcc
atcatgaaggcatttgaaaagatggacaaaaatcagagaaggaagagagaatcactaatt
agtaaattaccaaggagagacagttctgagattgaagaggacagtaaaaaaatatttcct
gatacgaaaggaaggaggaaagcacgcagtgatgaagaaggatctttgtctccatccaag
tctcccagagcattagttaagagtaagtcagatggagcaatggataaaagactatgtaaa
atggaagacctcctagatgatgaagtctgtgatgatgaaggggatgaatacaagccagat
ttcaaagaacagtcagagagtgaagacagtggtcttgataatacagaaaaaaagaaaaag
ttgaagaagaggataccaataaaaccaagaagacctccaaagtacatagattctgacgat
gaaaaagttgacaaagaagaaggaggaaaacagaaactgagccgagaaaaatcgttgagg
accacagatgatggcgatgattattcttttgacaagaggattcgggattttaacaaggct
gagaggaagaaacaagacctgagagcagcaggagaattatctgaatcagaggaggatgag
gagatggaaggagggtttaaagtccctggaagaatctggtctaaactattcaaataccag
aaagttggagtaaagtggttatgggagttacattgtcaacaagctggtggaattattgga
gatgaaatgggactgggaaaaactatacaagcaataggatttctagctggtctacgtcaa
agtaaaatcagggacaaacattttttgtttagaggactaggtcctaccattatagtcact
ccaactacagtcatgcaccagtgggtcaaagaattccataaatggtggccattgtttaga
gtagctatactacattcctcaggatcttacacttgtaaagaggcagaactaattaggact
attgtgaaagagaacggtgtactggttacatcctacagtactttggtaattcaccaggag
ttaatcatatcatataactggcattatatcattctggatgagggacataagatcaggaat
ccggatgcacaggctacactggctgtaaaacagattaaatcaccccacagaataatcctc
tctggatcccctatccagaataatcttaaagagttatggtccctgttcgattttatcttt
cctggaaaacttggtactttgcctgatttcatggcccactttgctgtccctattgttcaa
ggtggatattcaaatgcttcacaacagcaggttcaaactgcttataaatgtgcctgtgta
ctgagagatactattaatccttacatgatcaggagaatgaaagctgacctcaagattaat
ctgcccagtaaaaatgaacaggtgctattctgtagattgacacaggaacagagagagaca
tatatggaatatttacagtcaagggaatgtcagtctatattgtcaggaaaatatcagatc
ttttctggtttaatcacactacgtaaaatatgtaaccatccagacatatgtactggagga
ccaaagttatacattggagagactccagggaatgatgaatcattagaatatggatactac
aaaagatctgggaagatgattgttgtagaggcattattgagactgtggaagaaacagggt
cataaagttctgcttttctcacaaagtactgttatgttagacatcttagaaagatttgta
gccaaaccaaaatacagttacctaagaatggatggttcaacgcctatatctaccagacag
ccacttgtaaaccagttcaacaaggatgactccatattcttattcttgctgacaaccaga
gttggtggccttggtgtaaacttgacaggcgctaacagagtcatcatctttgaccccgat
tggaaccccagtactgatactcaggcaagggagagaacttggaggataggtcagactaga
caggtgactgtctatagactggttactacagggaccatagaggagaaaatataccacaga
caaatcttcaaacagtttctaaccaatcgagtcttaaaagatcccaaacaaagaagattc
ttcaaagcaaatgacttgtatgagttgtttgatttgaatgttgattgtaaggaaggaacc
gagactggtgccctgtttgcaggtactggatcagaggtaagcaaagctgatgtaagaagg
agagttaaacaacacaaactcaacagatttgacctcatgaaagaaagacagaaagcacaa
aaagaaagtgaaagtaaagaaactgcaaaggatgaagatgatatggatgatgtgaagaaa
aatttcaatgaagatgaggtaaatagaatgaaagagatagctaagaggctcagtcaacaa
attatgactggaatgtttaaaaagcctaatgaaacgacagatcaaaatagtataggtgaa
gaaaaatctgaagaaaattcaaatgggtctgttttgattaaagaaaatctagacgatata
aagaacaatgttgttgattgtggggaggaatgtagtgaatctaaacaaactattgatctg
tcaccaaaacactcaggaattgtttgtgatgatgaacaaccaagtacttcaaaaacttct
ttatcagttggaagtaaaacaaccagcatgctaaaggaaatgttaatagctggtaaacaa
agtgatttgcaaacacattcattctccactagtgaaaggcaacataaacactcttcttcc
agtgttggtcatcataaatcccatagaggacgtacacatagtcattccaacgcagaaggt
aaacacaaggtgtctcatggagaacataaacatagtgagtctcatggacagcataaacat
agtcaatcccatggaaagcataagcatagtctctctaacagtcctcataaacacagacat
tcatctcataaggaaagtaaacattcctctgaaaatggaaaggacagacacaggaaagat
aagaagaggagacgaaaggatgcaaagtgtgaaggagagaggattcctaacctagttaaa
agtgacacttacacaccagcagctgatgaggaggaggaaatagatagagagaaagagcat
gctgcccaggatgattatgtccttcagaaactcttcaagaaaaatggtatacaaggtgct
ttgaaacatgatgtgattatggaccctagtaaacatgattatatgatagttgaggcagag
gctgatagggttgcaacggaggctgtcaaagctctaaaaaggtcaaggtcacagtgtcta
ggagcaatgtctggtgtaccaaactggacaggtcaacatggtactatggctaaaaaacca
agatttggacagaagaaaaatacccagttacttgaaactgttgtacaaactacatcatct
gatgtacaaaaaatgaagaagattgaaaagggtgaattttctggtgaaaagagtctcttt
gatggtaccaaagcaggaagtgttgtgattaatacagatactggatcctcagctcctgag
gttatgacttctgatgaacttttaacccgaatgagaaggagaaatgtagttagtggtaat
acaactgctactacttctactggtgctgaaaatgatgaagtaaaccaacaagacgatgat
tcatcgactccaatagtagatgatgattcattcaaacttataacagaaatcagaaatttt
ataatgtttgaatgtcattctatgtgtaaggcaatgactcaggaaattttagatgaattt
ggaccaagattacctcctgctgaaacagcaaaatttaaatctatgttgaaatctatttgt
gactttgaaaaagtggatggcattggatactggaaacttaaaaattcattcagatga
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integrated database retrieval system
