Mytilus californianus (California mussel): 127709358
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Entry
127709358 CDS
T08804
Name
(RefSeq) DNA polymerase beta-like isoform X1
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127709358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127709358
Enzymes [BR:
mcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
127709358
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
127709358
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
127709358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
HHH_5
Cdd1
HHH
NTP_transf_2
HHH_2
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
127709358
NCBI-ProteinID:
XP_052070806
LinkDB
All DBs
Position
Unknown
AA seq
335 aa
AA seq
DB search
MSKRKHDDSENPNSEYSNFLMELANYEKNVNRQMHKYNAYRKAAAAIAKHPTQIKNGTEA
QKLEGVGAKIAKKLDEFIGTGKLEKLEKIRANSTNTAINELIKVTGIGPAAAQKFVQEGI
HSIADLRKNIDKLNHHQQIGLKHFEDFETRIPRKEMLELQDLALREIHKLDTEYNAEICG
SFRRGAETSGDIDILLTHPSFTSTSKKKTKCLHDVVKLFENIGFITDTLSHGDAKFMGVC
ILKKKTGGEEPKYRRIDIRLIPFDQYYCALLYFTGSDVFNKNMRAHALEKGFTLNEYTLR
PLGSTGTPGEPLPITSEEDIFDYLEYEYKKTCDRK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacggaaacatgacgacagtgaaaaccccaattcagaatatagcaatttctta
atggagcttgctaactatgaaaaaaatgtgaacagacagatgcacaaatacaatgcctat
cgcaaagctgcagctgctatagcaaaacaccctacacaaataaagaatggaacagaggct
caaaaattagaaggagttggagcaaagattgctaaaaagttagatgaatttataggaact
ggaaaattagaaaaattagagaagataagagcaaacagtacaaatactgcaataaatgaa
ttgatcaaagttacaggtattggcccagcagcagctcagaagtttgtacaagaaggaata
cattcaatagcagacttaagaaaaaatatagataaactaaatcatcatcagcagattggt
ttgaaacattttgaagattttgaaaccagaattccaagaaaagaaatgttagaacttcag
gatcttgcattacgagaaattcacaaactagacacagaatataatgctgaaatatgtgga
agttttagaagaggtgctgagaccagtggtgatatagacatactgctgacacatccatca
tttacatcaacttctaagaaaaagacgaaatgtcttcatgatgtagttaaactgtttgaa
aatataggcttcataacagatacattatcacacggggatgcaaaatttatgggtgtatgc
atactgaagaagaagactggtggcgaggagccaaaatacaggagaattgacattagattg
attccctttgaccagtattattgtgcattgttgtatttcactggcagtgatgttttcaac
aagaacatgagagcacatgctttagagaaaggttttacactgaatgaatatacacttagg
ccactaggtagtacaggaactccaggagaacctcttccaataacttcagaagaagatata
tttgactatttagaatatgaatacaaaaaaacatgtgacaggaaataa
DBGET
integrated database retrieval system
