KEGG   Mytilus californianus (California mussel): 127709657
Entry
127709657         CDS       T08804                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mcaf  Mytilus californianus (California mussel)
Pathway
mcaf03030  DNA replication
mcaf03410  Base excision repair
mcaf03420  Nucleotide excision repair
mcaf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127709657
   03410 Base excision repair
    127709657
   03420 Nucleotide excision repair
    127709657
   03430 Mismatch repair
    127709657
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mcaf03032]
    127709657
   03400 DNA repair and recombination proteins [BR:mcaf03400]
    127709657
Enzymes [BR:mcaf01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     127709657
    6.5.1.6  DNA ligase (ATP or NAD+)
     127709657
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     127709657
DNA replication proteins [BR:mcaf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    127709657
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     127709657
DNA repair and recombination proteins [BR:mcaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     127709657
   NER (nucleotide excision repair)
    Other NER factors
     127709657
   MMR (mismatch excision repair)
    Other MMR factors
     127709657
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 127709657
NCBI-ProteinID: XP_052071231
LinkDB
Position
Unknown
AA seq 1033 aa
MQKSITSFFTSPKPKNPEPICNSDSKKTEKSSVKKIKSPLKPKNTSPGKDADSPVKIRAK
RKSKARVIESDDEDECENNMDTSETSEAITKDQKEDKSECTEKKEDKSESTEKKEDKSES
TKDKTIEDKKVNKKETPLKSKPESVDSGVSSQSSQEGPSTPISSPFGLPVRRTARKSMGA
TPKRKTLDYKEEKSSSKKRRKTEDEEEKTEKEESTTKTNDTKETVTDQEEEEMEVDAKEP
DMSEDTKNTESDKQDDKKEKEEEESDKQESYGPKVKKEKKTPKGKKEKQTSNNKGKATPK
EKKSKKEEKSPEVKKEIKEEKTDEKTETKATKPVHSFFAPKKSTKSETEEDKAVGKSSVT
PSKDTKTELKKESGSDKKTDDYNPAKSRYHPIDDACWKHGEKIPYLALARTFEAIEAVSA
RLKIMEMLCNFFRSVIVLTPEDLLCSVYLCLNKLAPAYEGIELGIGETVLMRAIAQATGR
SVDKIKLDVQEKGDLGIVAESSRSNQRTMFAPPKLTIRDVFKKLTEIGQMSGNSAQAKKI
EKIKGMFVACRHSEARYLIRSLGGKLRIGLAEQSVLTALGNAVYLTPPGQDYPPEILDAG
KGQGSESLKKNMEEAALVIKTVYSECPNYGAIIPVLLKEGIQELPKHCKLTPGVPLKPML
AHPTKGVSEVLKRFENAEFACEYKYDGERAQIHILEDGKVHIYSRNSENNTTKYPDIIAR
IPKVKNDSVKSCVLDSEAVAWDAEKKQIQPFQVLSHRKRKDADASDIKVQVCVYAFDLLY
LNGESLVTQPFRRRRELLHQSFEEIEGEFVYAKSKILSDTEEIAEFLDESVKGNCEGLMV
KTLDKNATYEIAKRSHNWLKLKKDYLEGVGDTLDVVVIGGYIGTGKRTGRYGGFLLACYD
EENEEFQSICKIGTGFTDEDLEQHSTFFKEHLIDKPKTYYRYDNSHLPDHWFDAVQVWEI
KCADLSISPTHKAASGLVDPEKGISLRFPRFLRIRDDKKTDEATSASQVAEMYKGQQQIQ
NQTKDGGDEEDFY
NT seq 3102 nt   +upstreamnt  +downstreamnt
atgcaaaaatctataacatctttctttacctcgccaaaacccaaaaatccagaaccaatc
tgtaactctgacagcaaaaagaccgaaaagagttcagttaaaaaaattaagtcaccactg
aaaccaaaaaatacctcgccaggaaaagatgcagattcacccgtgaaaatacgtgctaaa
agaaagagtaaagccagagttattgagagtgatgatgaagatgagtgtgaaaacaatatg
gataccagtgaaacttctgaggctatcactaaagaccagaaagaggacaaatcagaatgt
acagaaaagaaagaggataaatcagagagtacagaaaagaaagaggataaatcagaaagc
acaaaagataaaacaatagaggataaaaaagttaacaagaaagaaacccccttgaagtca
aagccagagtctgtagattcaggagtttcctcacagtcatcacaggaaggaccatcaaca
cctattagttcaccatttggtttacctgtcagaagaacagcaagaaaaagtatgggagct
acacccaaaagaaagacattagactacaaagaagaaaaatcatcaagtaaaaaaagacgg
aagacagaagatgaggaagaaaagactgaaaaagaagagagcacgactaaaacaaatgat
acaaaagagacagttacagaccaagaagaagaagaaatggaggtagacgcaaaagaacct
gatatgtcagaagacacgaagaatacagaatctgacaaacaagatgacaagaaggaaaaa
gaagaagaggagagtgacaaacaagaaagctatggtccaaaagtcaagaaagaaaagaaa
acacctaaagggaagaaagaaaaacaaactagtaataataaagggaaagcaacccctaaa
gaaaagaaatcaaagaaagaagaaaaatctcctgaagtcaaaaaagaaataaaagaagaa
aagactgacgagaaaactgaaacaaaagcaacaaaacctgtacacagtttctttgctccg
aaaaaaagcaccaagtctgaaacagaagaggataaagctgtgggcaaatcaagtgtgact
ccttccaaagataccaaaacagagttgaaaaaagagtcaggatctgataagaagacagac
gattataatcctgccaaatcacggtaccatccaattgatgatgcctgttggaaacatggg
gaaaaaataccatatcttgccttggctaggacctttgaagcaatagaagctgtctcagct
agattaaagattatggaaatgctttgtaattttttccgttctgtaattgtactcacccca
gaagatttattatgctctgtgtacctgtgtctcaacaagttggctccagcttatgaaggc
attgagcttggtattggagaaacagttctgatgagggctatagctcaggcaacaggtaga
agtgttgacaagataaagcttgatgtacaagagaaaggtgacctgggaattgtagcagag
tccagtagaagtaaccaacgaacaatgtttgctcctccaaagttgacaatacgagatgtg
ttcaaaaagttgacagaaatcgggcagatgtcaggcaattctgctcaagcaaagaaaatt
gaaaaaataaaaggaatgtttgtagcctgtagacattctgaagccagatatcttattcga
tcccttggagggaaactgagaataggtctagcagagcaaagtgtcctcacagcacttggt
aatgctgtataccttacaccccctgggcaagattatcctccagaaatattggatgctggg
aaaggtcagggttcagaatcattaaaaaagaacatggaggaagcagctctagtcattaaa
acagtttatagtgaatgtccaaactatggtgccataatcccagtattattaaaggaaggt
atacaggagttacccaaacattgtaaactaacaccaggtgttccactcaaacctatgctt
gcccatcctacaaagggtgttagtgaggtattgaaacgttttgaaaatgcagaattcgcc
tgtgaatataagtatgatggtgaaagagcacagatacatatattagaagatggaaaagta
catatatacagtagaaactctgagaacaataccactaaatacccagatataatagccaga
atacctaaagtcaagaacgattctgtcaaatcatgtgtacttgactctgaagctgtggcg
tgggatgcagagaaaaaacaaatacagcctttccaagtattaagtcacagaaaaaggaag
gatgctgatgcttcagatataaaggtccaggtctgtgtgtatgcatttgacttattatat
ttaaatggcgaatctctggtcacacagcctttcagaaggaggagagaactcttacatcag
tcatttgaagaaattgaaggagaatttgtgtatgctaagtctaaaattttatctgataca
gaagaaattgctgaattcttagatgagtctgttaaaggaaattgtgaaggcttaatggtg
aaaactttagacaaaaatgcaacttatgaaatagcaaaacgatctcataactggctgaag
ttgaagaaagactatttagagggagttggtgacacattggatgttgtggtgataggtggt
tacataggaacaggaaaacgaactgggagatacggtggattcttattagcttgttatgat
gaagaaaatgaagaatttcaaagtatatgtaaaattggcactggttttactgatgaggat
ttagaacaacattctaccttctttaaagaacatttgattgataaacctaaaacatactat
cgctatgacaactctcatctgccagatcattggttcgatgctgtacaagtatgggaaatc
aaatgtgcagatttatcaatttcaccaacacacaaggcagcatctggactggtggatcca
gagaagggaatttctttaagatttccacgttttcttcgcatccgtgatgacaaaaagacc
gatgaagctacctcagcctctcaggtggcagagatgtacaaaggccaacaacaaatacag
aaccaaacgaaggatggtggagacgaggaagatttctattga

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