Mytilus californianus (California mussel): 127709697
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Entry
127709697 CDS
T08804
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127709697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127709697
Enzymes [BR:
mcaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127709697
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
HECT type E3
127709697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Motif
Other DBs
NCBI-GeneID:
127709697
NCBI-ProteinID:
XP_052071293
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MISAFCWGSADHGQLFTENDEPILSPKEVKLNIDQEVKDIVEINCSEGHTLLVTSNGSCY
ACGCNDYGQIGHYSTNKIGKVSSLNNQKVISVVAGSQHSLALTEAGEVFSWGDNSCGQLG
RGQVDENQARQPKVIKPLVTYHIIQICSGNNHSLALSNDGLVFSWGANNYGQLGTGSSSQ
HMDTPQPLLSIRGIPVSQIIAGGNHCFILSMSGGLFGWGRNSFGQLGVNDENDRNHPTQC
KSLRQQRTVFVSCGEDHTCTLTQDGGVFTFGCGSHGQLGHNNTNNEILPRRIMDMMGTVV
TQIACGRRHTLTYVPETGRIYSFGSGSCGQLGLGNTDKKTSPMLVPCPFMSSINSRSPRA
MEIDGTSHIVSRIFSGGNKCIVLANKINSQPASLKPIDFREDGMLRSILCLSDKLTEKVR
SLNAKDLIPHEVEVEMEKIFSASACLNASFLLLNHEHFTTSPKKHGLDMDQVRDTFGKLA
HISNVPTIQKITKCLESYLLPSLPQSPPDVEALRLYLILPEYHMFEEPKKFSTLIGPFAN
SILNLDKPGSKVLDYWWGSLKPRHFSRVLSLYKQTVIYLLQLPQSLIQTELFSRNIHIKF
SLEIMKKLNKVNELNGQIIPYNHFYIPELRDKVDIRADYVNWVQQSRLINSPPMHFCDYP
FVFDGPAKSMLLQTDAFMQMRTALEEAQRRNFQSLFLQNIDPVSPLLVLHVTRENIVKDT
IQQLEHKGSGDLKKPLKVVFIGEEAIDEGGLTKEFFLLLLREILDPKYGMFKFYEESRVD
WFNSNSFEEPKMFYLIGCLCGLAIYNSTIIVLNFPLALYKKLLKRSPDVEDLKELMPQLG
RGLEQMMDYEEDDFEDVFCQTFEISVESFGEVKNIELCKGGSKKPVTKSNRKEYLDLYIS
YIFNESIEKQYTAFSYGFLKVCDSKVLDLFHPLELQSMVIGNENYDFHILEKNTEYKGEY
HRYHPTIKIFWDVFHDLSIEQKKKFLLFLTGSDRIPILGMETIKVIIQPTQGGESYLPVA
HTCFNILDLPTYEDKQTLKDKLILAIEHTQGFGIV
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgatatcagcattttgttgggggagtgctgaccatggccaactatttacagaaaatgat
gaacccatcttgtcacctaaggaagtaaagctgaacattgatcaagaggtcaaagacatt
gtggaaatcaattgtagtgaaggccatactcttctagtaacttctaatgggtcatgttat
gcttgtggttgtaacgactatggtcaaattggacattatagtacaaacaaaattggaaaa
gtatcatctttgaataatcaaaaagtgatcagtgtagtagcaggatcacaacacagtttg
gcattaactgaagctggtgaagtattcagctggggtgataacagttgtggtcagttagga
agaggacaagtagatgaaaaccaggctagacaaccaaaagtaataaagccattggttaca
tatcatatcatacagatttgttctggcaacaatcattctctagccttaagtaatgatggt
cttgttttttcttggggagcaaataattatggccagttgggaacaggtagttcttcacaa
cacatggatacaccccaacccttgcttagtatacgagggataccagtatcacagattata
gctggaggaaaccattgtttcattttgtctatgtctggtgggttgtttggatggggaaga
aatagctttggacaacttggtgtgaatgatgagaatgatcgtaatcatccgacccagtgt
aaatctttacgacaacagagaacagtgtttgtttcctgtggggaagatcacacatgcaca
ttaacacaggatggaggagtatttacctttggttgtggtagtcatggtcagttagggcat
aataatacaaacaacgagatccttcctcgaagaattatggatatgatggggacagttgtt
acacagatagcttgtggcagacgtcatacactaacatatgtaccagagacggggagaatt
tactcatttggatctggctcttgtggacagttaggtttaggaaacacagataagaaaacc
agcccaatgcttgtgccttgtcctttcatgtcttccatcaatagcagatcaccaagagct
atggaaatagatggcacatctcatattgtcagcagaatcttctctggtggaaacaaatgt
attgtgctggcaaataaaattaattctcagccagcaagtctaaagcctatagattttcga
gaagatggaatgttgagaagtattctttgtttgtcagacaaacttactgaaaaagttaga
tcattaaatgcaaaagacttaattcctcatgaagtagaagtggaaatggagaagattttt
tcagcttctgcttgtttgaatgcttcatttctattactaaatcatgaacattttactacc
tcaccaaaaaaacatgggttggatatggatcaagttagagacacatttggaaaacttgct
catatttcaaatgtacctaccattcaaaagataacaaagtgtttagagtcttatttattg
ccgtccttaccacagtctccacctgatgtagaggctctaaggttgtatcttattttacca
gagtatcatatgttcgaggagcctaaaaaatttagtacacttataggaccttttgcaaac
agtatattaaatctggacaaaccaggatcaaaagtgttagattattggtggggaagttta
aaacccagacattttagcagagttttaagtttgtataaacagactgtgatatacctactt
cagttaccccagtcactgattcaaacagagctgttttccaggaatattcatattaaattt
tctctggagataatgaagaaactgaacaaagtgaatgaacttaatggtcaaattattcca
tataatcatttctacattcctgaactgagggacaaagtggacattagggctgattatgtt
aactgggtacaacagtcaagactgataaactctccacctatgcacttctgtgattaccca
tttgtgtttgatggacctgctaaatctatgctacttcaaacagatgcctttatgcaaatg
aggactgccttggaagaagctcaacgacgaaacttccagagtttgtttttacaaaatatt
gacccagttagccctttgctggtgctacatgtgactagagaaaatattgttaaagataca
atacaacagttagaacacaaaggcagcggggatctaaagaaacctctaaaggtggtgttt
ataggagaggaggcaatagatgaaggtggactcactaaggagtttttccttcttttattg
agagaaattttagatcctaaatatggaatgtttaaattttatgaagaatcaagagtcgat
tggtttaactcaaattcatttgaagaaccaaagatgttttatctgattgggtgtctttgt
ggattagcaatatacaactccaccattattgtgttgaactttcccttggcattatacaag
aaattactgaagaggtcaccagatgttgaagatttaaaagaacttatgccacaattagga
agaggtttagagcagatgatggattatgaggaagatgactttgaagatgttttctgtcaa
acatttgagatatctgtagaaagttttggtgaagtcaaaaatatagaattatgtaaaggt
ggatctaaaaaaccagttaccaaaagtaatagaaaagaatatttagatttgtacatcagt
tacatttttaatgaatcaatagaaaaacagtatactgcatttagttatggcttccttaaa
gtctgtgatagcaaagtcctggatttatttcatccattagaactacaatccatggttata
ggaaatgaaaactatgacttccatatattagaaaagaatacagaatataaaggggagtac
catagatatcacccaacaatcaaaattttctgggatgtcttccatgatctttcaatagaa
cagaagaaaaagtttttattatttttgacaggaagtgacagaattcctattttaggaatg
gaaacaattaaagtgataatacagccaactcaaggtggagaaagttatcttccagtggct
catacctgttttaacattttagatctcccgacctatgaggataaacagaccctgaaagac
aagttaatactggcaatagaacatacacaaggctttggcattgtgtaa
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