Mytilus californianus (California mussel): 127710220
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Entry
127710220 CDS
T08804
Name
(RefSeq) splicing factor 1-like isoform X1
KO
K13095
splicing factor 1
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127710220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127710220
Spliceosome [BR:
mcaf03041
]
Complex A
Other components
Complex A specific factors
127710220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
KH_12
zf-CCHC
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
127710220
NCBI-ProteinID:
XP_052071940
LinkDB
All DBs
Position
Unknown
AA seq
628 aa
AA seq
DB search
MFQSTKRSYDYGNNFTSAGQQSWGSGSSGSPGPGQTEGSDKKKKRKSRWAQDSEMEKTVI
PGLPTVIPTGLSSDQEKQYLMQLQIEEISRRLRTGDLGIPPNPESRSPSPEPIYNNEGKR
LNTREYRTRKKLEEERHKLVQDAMNSNPDYKPPADYKPPIIRVSDKVMIPQDEHPEINFV
GLLIGPRGNTLKNLEKDTGAKIIIRGKGSVKEGKIGRKDGQPLPGEDEPLHAYVTANNPE
NVNKAVEKIKEIISQGIEVPEGQNDLRRQQLRELALLNGTLRENDGLAKLKQLQQASTII
TNNILCTVCGGAGHLSQDCKSKRPGDTLKNFSMPAHQNSMADRAKMDSEYMSLMAELGEG
PTSSPKPLLPSNQHNHPPTQQFRLPITQPPPNPMSLNPPWQPHQQRNIPPPQVVNITNLG
GQQPNQPPNSYNVQPVPPPSSVPSSMVPAPVPPPSSVMSSQAGPMMRHWQQPVSSAPQSK
WQQPLLSAPQSKWHQRTWSEPQNMQPRPALMSAPPPPPPSSHPQQSQPWMQQPPVQGVPP
PPPVTSSTGQLPWQPAPPPPPSNMSPWQQHPPHHGHQQPMQNQLPPPPPPPSSQQGYNHM
APPPPPPGGYNMGGVNQLLAQPPPPPPN
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagtcaaccaaaagatcgtatgattacggaaataattttacctcagctggacaa
cagtcatgggggtcgggatcctcaggttcacctggtccaggacagacagaaggaagtgat
aaaaagaagaaaagaaagagtcgctgggcacaggattcagagatggagaagacagttata
cctgggttaccaacagtcattcctacagggctttcatcagatcaagaaaaacagtacttg
atgcaactacaaattgaggagattagtcgtagactgagaacgggagatcttggcatacca
cccaacccagaatccagatctccctcaccagaaccgatttacaacaatgaaggcaagcgt
ctcaatacaagagaatacagaactaggaagaagttggaggaagaaagacacaaactggtg
caagacgccatgaatagtaaccctgattataaacctccagcagattacaaacctcccatt
atacgagtcagtgacaaagtaatgatcccacaggatgaacatccagaaattaattttgta
ggacttctcattggtccaaggggaaatactcttaaaaatttagaaaaagatactggtgca
aagataattatccgagggaaaggttcagtcaaggaagggaagataggaaggaaggatgga
caaccattaccaggagaagatgaaccactgcatgcttatgtcacagcaaataatcctgaa
aatgtcaacaaagctgtagaaaagataaaagaaataataagccagggcatagaagttcct
gaaggacaaaatgatttaagacgacaacagctgagagaactggctttactgaatggtaca
ctgagggaaaatgatggattagcgaaactaaagcagctacagcaagcctccactatcatc
acaaataatattctgtgtacagtgtgtggtggagcaggacatttgtctcaggactgtaaa
tctaaaagaccaggagataccctgaagaatttcagtatgccggcacaccagaattcaatg
gctgatagagctaaaatggacagtgagtacatgtcgttgatggcggagttaggagaggga
ccaacatcatcacctaaaccactattaccttcaaatcagcataatcatccgccaactcag
cagtttaggttgccaataacacaacctcctcctaacccaatgtctttgaatcccccatgg
cagcctcatcaacaaaggaacattcctcccccacaagtggtcaatataaccaaccttggc
ggtcagcagcccaatcaaccccccaacagctacaacgtacagcctgtaccgcccccatca
tctgtaccatcatcgatggtacctgctccagtgccaccaccaagctcagtgatgtcatca
caagctggtccaatgatgaggcactggcaacagccggtatcttcagcaccacagagtaag
tggcaacagccattattgtcagcaccacaaagtaagtggcatcagaggacatggtcagaa
ccacaaaacatgcagcctcgtcctgcattgatgtcggctcctccccctcctcctccaagc
agtcatcctcagcaatcacagccatggatgcaacagccaccagtacaaggagttcctcct
ccgcctccagtgacatcatcaacaggacagttaccgtggcaaccagctccaccaccacca
ccatcaaacatgtctccatggcaacagcatccgccacaccacggacatcaacagccaatg
cagaatcagcttcctcctccaccaccccctcccagtagtcagcaaggatacaatcacatg
gccccacccccaccaccaccaggaggatataatatgggtggagtcaatcagctgttagcc
cagccaccaccaccaccaccaaactga
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