Mytilus californianus (California mussel): 127710291
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Entry
127710291 CDS
T08804
Name
(RefSeq) E3 ubiquitin-protein ligase TRAF7-like isoform X1
KO
K10646
E3 ubiquitin-protein ligase TRAF7 [EC:
2.3.2.27
]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127710291
Enzymes [BR:
mcaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127710291
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
127710291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_SCAP
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
Beta-prop_EML_2
Beta-prop_WDR75_1st
zf-RING_UBOX
Beta-prop_SPT8
zf-TRAF
WD40_like
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Prok-RING_4
zf-RING_6
U-box
Beta-prop_Nup120_160
DUF1664
zf-RING_2
PKcGMP_CC
FPP
HMMR_N
zf_RING_Vps8
DUF4515
RING_XB3-XBAT31
Spc24
Fib_alpha
DUF641
Motif
Other DBs
NCBI-GeneID:
127710291
NCBI-ProteinID:
XP_052072042
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MDHVDFHAVPEVKDNVFVETTFGANKPVTTVKVVEPGSREVQIPSQVNSLTISSFNSLEL
KAPSTSTTSSLSVPTNSVSHTSHTRSLSNDSGEFTAWKFMSAEDKEDICVFVDEPNKKLF
CKLCNQVFRDPVIVSCGHTYCRQCVASHEDGVCPVDNSNMQVVVANIAVSEQIGEMFIHC
KYGCQLADDGQSYVVDSATCPVTLKISHRKEHEDMCDFMKVKCPNGAGCAPVLRKDIEDH
LRSCNNVRCPHHKHSCEFVGTSDELEDHLRSCKFEGMKEFLVRMDEKMTDMQFSLNQKDQ
EIQFLRSMLGKLAERLEALEKSSDMKIDLLEHNQNKIMTTIMDCQRDYAVIHDDLAHLNS
IVNGRNVTIGTYDPQQVIRCRGTFVGHQGPVWCLCMSGDLLFSGSSDKTVKVWDTGNNYK
CLKTLEAHTGIVLALCTYGNKLFSGSQDCKIIIWNIDTLEKVSEIEAHENPVCTLTAAKN
MIFSGSLKVIKIWDVHALKLKCELTGLNHWVRALVATQNHLYSGSYQTVKIWDLEKLECV
DILETSGGSVYSIAITPHHILCGTYENVIHVWEIDSKENAKTLKGHSGTVYALATLQSPT
GIKVFSASYDRSLRVWSMDNMICTQTLIRHQGSVACLATSRGRVFSGAVDNTVKVWQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atggaccatgttgatttccatgcggttcctgaagttaaagataatgtttttgtagagaca
acatttggtgctaataaacctgtaacaacagttaaagttgtagagccaggatccagagaa
gtacagataccatcccaagtaaacagtttaactatttcatcattcaattcattagaatta
aaggcaccaagtacatctactactagttccttatcagtaccaactaacagtgtatctcac
acatcacatacaaggtccttatcaaatgattccggtgaatttacagcttggaaattcatg
tctgccgaggataaagaggatatctgtgtttttgttgatgaacctaacaagaagttattt
tgtaaactatgtaatcaagtattcagagatccagtgatagtatcatgtgggcatacttac
tgcaggcagtgtgtggcatcacatgaggatggtgtttgtcctgtggacaactctaatatg
caggtagttgtggccaacatagcagtatcagaacagattggtgagatgtttattcactgt
aaatatggctgccaactagcagacgacggacaatcttatgttgttgattcggctacctgt
cctgttacgctcaaaattagccatagaaaagaacatgaagacatgtgtgatttcatgaaa
gtaaaatgtcctaatggtgctggttgtgcccctgttttaaggaaggatatagaagatcat
ctaagaagttgtaacaatgttagatgtcctcatcataaacacagttgtgaatttgttggt
acatcagatgagttagaagaccatctcagatcatgtaaatttgaaggaatgaaagaattt
cttgtcagaatggatgagaaaatgacagacatgcagttttctctcaaccagaaagatcag
gaaatacagttcttacgatcaatgttaggcaaattagctgaaaggttggaggcattagaa
aaatcttctgatatgaaaatcgatttactggaacataatcaaaataaaataatgacaact
atcatggattgtcagagagattacgctgttatacatgatgatttagcacatctcaatagt
attgtaaatggccgtaacgttaccattggaacttatgacccacaacaggtgatcagatgt
agaggtacctttgtaggacatcagggtccagtatggtgtctttgtatgtctggtgatttg
ttgtttagtgggtcttcagacaaaactgtcaaggtttgggatactggcaataattacaaa
tgtttgaagactctagaagctcacacaggaattgtcctggcattatgtacatatggcaac
aaattattcagtggctcacaggattgtaaaattataatttggaatattgatacactggaa
aaggtttctgaaattgaggctcatgaaaatcctgtttgtactctaactgctgccaaaaat
atgatcttcagtggatcactaaaagttataaagatatgggatgtacatgcattaaagtta
aagtgtgaactgaccggtttgaaccattgggtacgagcacttgtagctacacagaaccac
ttatacagtggatcataccagacagtcaagatatgggatttggagaaattagagtgtgtt
gatatcctagagacttctggtggaagtgtgtatagtatagcaattactcctcatcacata
ctgtgtggaacatatgaaaatgtcatacatgtgtgggaaatagatagcaaagaaaatgca
aagacattgaaaggccacagtggcacagtgtatgccttagccacattacaatctcctacg
ggtattaaagtcttcagtgcatcatatgacagatctttaagggtatggagtatggataat
atgatttgtacacagacactaatcagacatcaaggaagtgtggcatgcctagccacatcc
aggggcagggtattctcaggagctgtagacaatactgtcaaggtctggcagtaa
DBGET
integrated database retrieval system
