Mytilus californianus (California mussel): 127710883
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Entry
127710883 CDS
T08804
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127710883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127710883
03110 Chaperones and folding catalysts [BR:
mcaf03110
]
127710883
04121 Ubiquitin system [BR:
mcaf04121
]
127710883
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
127710883
Spliceosome [BR:
mcaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127710883
Complex C
U4/U6.U5 tri-SnRNP related factors
127710883
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
127710883
Chaperones and folding catalysts [BR:
mcaf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
127710883
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
U-box type E3
127710883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
DUF4887
Motif
Other DBs
NCBI-GeneID:
127710883
NCBI-ProteinID:
XP_052072804
LinkDB
All DBs
Position
Unknown
AA seq
517 aa
AA seq
DB search
MGKKQHQKDKLYLTSTEWRTEFGGYKGQLQKSAEFRRLPFYCCSLSFQPFQDPLCTKDGV
IFDIMNIVPFLKKYGVNPVNGEKMTAKDLIHLNFHKNKDDRFHCPVTFQVFNQNSSIVAI
KTTGNVFSKTAVAKLNLKTGHLKDLLTDQPFQKTDIITIQDPTDVEKCNFANFYHFKHNL
KVTNEDKSESKSKIRSASTMTQSVLDELEKTYKAPEKEEASMAKADKFNAAHYSTGQVAA
SFTSTAINPVTEHETALIDEDILRYERVKKKGYIKLDTNYGPLNIELYCDMVPKTCENFL
KHCKNGYYKGSKFHRSIRNFVLQGGDPTGTGLGGESIWGGTFKDEFKPNLQHTGRGVLSM
ANSGPNTNKSQFFITFRSAHHLDGKHSVFGRVVGGIGSLDAVELIETDKKDRPKEDIIIE
DCTVFVDPYEEADEQLQKEREEDIQKAKEEKEKLEKERKKKVAAEGTPTVYKSGVGKYIN
LAASDTSLKRPGGDEPSETEKKKAKFVPGKLGDFSNW
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaaaacaacatcagaaagataagttgtatcttacatctactgaatggagaaca
gaatttggagggtacaaaggtcagcttcagaaatctgcagaatttagacgtttacctttt
tactgttgtagcttatcgttccaaccttttcaagatccactatgcaccaaagacggcgtc
attttcgatatcatgaacattgttccatttctaaaaaagtatggcgtgaatcctgtaaac
ggagaaaagatgacagctaaagatctgattcacttgaactttcataaaaacaaagatgat
agatttcactgtccagttacgtttcaagtctttaatcaaaactctagcatagtggctatt
aaaacaacggggaacgtgtttagcaaaaccgcagtggctaaactaaatctcaaaacaggt
cacttgaaagaccttttaactgatcagccatttcaaaagactgacatcattaccattcag
gaccccacagatgttgaaaaatgcaattttgccaatttttatcattttaaacataattta
aaggttacaaatgaagataaatctgaatcaaagtcaaagatcagatctgcaagcactatg
actcaatctgtccttgatgagcttgaaaaaacttacaaagctccagaaaaggaggaagca
tcaatggccaaagcagataaatttaatgcagctcattattctactggccaagttgcagca
tcatttacctcaacagcaataaatcctgtcacagaacatgaaactgcgcttattgatgaa
gacatactgcgttatgaaagagtgaaaaagaaaggatacatcaaacttgacactaattat
ggtccactgaacattgaactttattgtgatatggtcccaaaaacatgcgagaactttttg
aaacattgtaaaaatggttactacaaaggttcaaaatttcatcgctcaattagaaatttt
gtgctgcaaggaggagaccctactggtacaggcctaggaggggaatcaatatggggtgga
actttcaaagatgaatttaaaccaaatttacaacacaccggccgaggagttttaagtatg
gcaaactctggaccaaacacaaacaaatctcagttcttcatcacattcaggtcagctcat
catttagatggtaaacactcagtgtttggtagagttgttggtggaataggatcattagat
gcagtagaactcattgagactgacaagaaagatagaccaaaggaagacataatcattgaa
gattgtacagtttttgtagatccatatgaagaagcagatgaacaacttcaaaaggaaaga
gaagaagatatacagaaggcaaaagaagaaaaagaaaagctagaaaaagaaagaaagaag
aaggttgcagctgaaggtactcctacagtttacaagtcaggtgttgggaagtacattaac
ttggctgcaagtgatactagtttaaaaagaccaggaggcgatgagccatcagagactgaa
aaaaagaaagctaaatttgtaccaggaaaattaggggactttagtaactggtga
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