Mytilus californianus (California mussel): 127710908
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Entry
127710908 CDS
T08804
Name
(RefSeq) structure-specific endonuclease subunit slx1-like
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127710908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127710908
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127710908
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLX1_C
GIY-YIG
FANCL_C
zf-HC5HC2H
zf-HC5HC2H_2
PHD_NSD
C1_2
Motif
Other DBs
NCBI-GeneID:
127710908
NCBI-ProteinID:
XP_052072831
LinkDB
All DBs
Position
Unknown
AA seq
291 aa
AA seq
DB search
MVQEIENFYGVYLLYNVNPKFKGRTYIGFTVNPNRRIQQHNKGRHAGGAWRTHGRGPWEM
VLIIHGFPNEISALRFEWAWQHPDKSRRLRHLPGKKKKETPFLFRFRIVSEMLRSGPWNR
LALTIRWLKQEYITDFAPDIKPPVHMPIAYGLVKVKKVGSDTGRSKKGDNSEKEAVDDDL
VNLSQCGNKYPRCSVCNKRIQAEDHTLKCVHPKCQMVSHTLCLANKFLSDKGTKNEVLPV
DGTCPKCKGAVLWGDLVRLKTGCYQNLEECGSSDDEENEDHWANELQTQIP
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaagaaattgaaaacttttatggagtttatttactttacaatgtaaatccaaag
ttcaaaggtcgtacatacataggattcacagtaaatccaaataggagaattcaacaacac
aataaaggtcgacatgcaggaggggcatggagaacacatggaaggggtccatgggaaatg
gttttgattatccatggttttccgaatgaaatatctgctcttagatttgaatgggcctgg
caacatcctgacaaatcaagaagactccgacatcttcctggaaaaaagaaaaaggaaacc
ccattcctttttcggttcagaatagtatcagaaatgttaagaagtggaccgtggaataga
cttgcactaacaatcagatggttaaaacaggaatatattacagattttgcacctgacatt
aaaccaccagttcatatgccaatagcttatggtttagtgaaggtgaaaaaggttggatct
gatacaggcaggagtaagaagggagacaattcagaaaaagaagcagtagatgatgattta
gttaatctttcacaatgtggtaacaagtatccaagatgtagtgtttgtaataaaagaata
caggcagaagatcatacattaaaatgtgttcatccaaaatgtcagatggtatcccataca
ttatgtttagccaataaatttctgtcagacaaaggaacaaagaatgaagttttaccagtt
gatggtacctgtcccaagtgtaagggtgctgtgttgtggggtgatttagtgagactcaag
acaggatgttatcagaatctggaagagtgtggaagctctgatgatgaagaaaatgaagat
cattgggccaatgaactacaaactcaaatcccatga
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