Mytilus californianus (California mussel): 127711134
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Entry
127711134 CDS
T08804
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127711134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127711134
03041 Spliceosome [BR:
mcaf03041
]
127711134
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127711134
Spliceosome [BR:
mcaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127711134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WDR55
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_SCAP
Ge1_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
127711134
NCBI-ProteinID:
XP_052073045
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MDRDLAARRQLHTTIFDHCYSPCGKYIAAANNYGQIAVFSLSAALAPEASEATWKPVFIF
EASEDGAIFTLASTDTLLISGGNGPIKAWKWSDILSKSPRVVWSLNIPKKGPFSQPEINS
IVLNTEEDKSEVFAGCGDNNIYVWDLESGEQKITLSGHDNYVHSLAVKNGNTCASASEDG
TVKIWDTRSPSDAVHSIEPYKNELCARPKFGKWLGCVAMDTTDDWLVCGGGPSLSLWHLR
SLTATTMFDTPGACQQCVMFHDDSIISAGSKGYINHWSVNGEQRMEVPCTPSSVFSLSYN
SASNNCKVLSATGNSSKLDIFTNFGYKAFSFTFSQI
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggatagagatttagcagcacgtagacaactacacacaacaatatttgatcattgttac
tcaccatgtggaaagtacattgcagctgctaataactatggacagattgctgtttttagt
ttgtcagcagctttagcaccagaagcttctgaagctacatggaaacccgtctttatattt
gaagcctcagaagatggagctatatttacattagcatcaacagatactttattgataagt
ggaggaaatggtccaataaaagcttggaaatggtctgatattttaagtaagtccccaaga
gtggtgtggtccttaaatattccaaaaaaaggaccattttcacagcctgagattaactcc
atagtccttaatacagaggaagataaatctgaagtgtttgctggatgtggtgacaataac
atttatgtgtgggaccttgaatctggtgaacaaaagataacattaagtggacatgacaat
tatgtacacagtttagcagtgaagaatggaaacacatgtgcctcggcatcagaggatggt
acagtcaaaatatgggatacaaggagcccaagtgatgctgtgcatagtatagaaccatat
aaaaatgagttgtgtgcaagacctaagtttggtaaatggttgggatgtgttgccatggat
accacagatgattggctggtatgtggagggggaccaagtctgtctttatggcatctaaga
tcattgacagctacaactatgtttgatacaccgggagcctgtcagcagtgtgttatgttc
catgatgattcaattatttcagcaggctcaaaaggttacataaatcactggtctgtaaat
ggtgaacagaggatggaagttccctgtacaccctcatctgtgttcagtctatcttataat
tctgcatcgaataattgcaaggtgctgagtgcaacagggaacagttctaagttggacata
tttacaaactttggttacaaagcattctcatttacattctcacaaatttaa
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