Mytilus californianus (California mussel): 127711776
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Entry
127711776 CDS
T08804
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03013
Nucleocytoplasmic transport
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127711776
09122 Translation
03013 Nucleocytoplasmic transport
127711776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127711776
03041 Spliceosome [BR:
mcaf03041
]
127711776
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127711776
Spliceosome [BR:
mcaf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127711776
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
BLOC1_2
DUF8578
Motif
Other DBs
NCBI-GeneID:
127711776
NCBI-ProteinID:
XP_052073859
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MSSKDHHEVEVKRKRSLKKESSPTRGAGDVKRSKSSTNDVKLFYAEEEEVEHRDPKKDLN
LFKSTTDDVRKCFKDIRDSKDKPDKSTNDHIETKKRETALHFVLLKKLNRLSHIRCKKSR
DATNEAKQRIDQYHLQLQNLLYETMHLEKEITKCLEFKSKDEEIELVSVEEFYEAAPNDI
SKPETTKADQHQLRLARLDWELEQRKMLAQKLKESETSKDQLDKEIKTQQEYLENLQPKL
TSILQSTKPVQEYLGMPFDQIREQHQIAGHLPHPLYVLYMQTDAYRQACDKKLEVKIEGD
IEAAKSMKSTPELFADVEDSDSDQEEQEKKSSKRRRKTVDSGKVERKKKVLKKHPLSVVL
KIKTKDGTCLQLNFYYLVTLEIVTVVMQLKSGSESPPSCISGGDLLSPDLLLNEIYPGDN
GNTSPNAANQYELRRLGLGEFNQYIKETGKPYLWAQWLSGLQFLNNNKSSKVADSSVSSE
NMQQTIKRLRRRIKSRLSLLKQLASLERGIIPLAPEAMSLFPTKIVAKLTSWKRSTYEDF
CVLPYTEELVSNGLAKESDIFFTAAMDRGSAKMTAQIVMTPDYPAVAPLFLVSLQWQTER
SALNDINIQEMEEEVNVHYKEMIIHKSHDQILANQLQRLLMCFDVYLETETQNAEEGPKE
ISKEKVYARFARGPNRTKPYKFCAEVGIFSHR
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaaggatcaccacgaagtcgaagttaaaaggaaaagaagcttgaaaaaagag
tcttctccaaccagaggagcaggagacgtgaaaagatctaaatcatcaacaaatgatgtt
aaattgttttatgcagaggaagaggaggttgaacacagagatcctaaaaaagatctgaat
ttgtttaaatcaacaacagatgatgttagaaagtgttttaaagatatcagagattcaaaa
gataaaccagacaaatccaccaatgatcacatagagacaaagaaaagagaaacagcttta
cattttgtgttgctaaagaaattaaacagattatctcacattagatgtaagaaatcaaga
gatgctactaatgaggccaaacagagaatagaccagtaccatttacaactacaaaatcta
ttgtatgaaaccatgcatctagaaaaagaaatcactaaatgtctggagtttaagtcaaaa
gatgaagaaattgagcttgtatctgttgaagagttttatgaggcagcaccaaatgatatc
agtaaacctgaaaccacaaaagcagaccaacaccagctgagactggctagattggattgg
gaactggaacagagaaaaatgttggctcagaagctaaaggaatctgaaaccagtaaagac
caactagataaagaaataaaaacacagcaagaatatttagaaaacttgcaaccaaaactt
acatcaatattacagtccactaagccagttcaggagtacttaggtatgccatttgaccag
atcagagaacagcatcaaatagctggacaccttccccatcctctatatgtactttacatg
cagacagatgcctacagacaggcttgtgacaagaaattagaagtgaagatagaaggagac
attgaagcagctaaatctatgaagtctactccagaactatttgctgatgtggaggatagc
gacagtgaccaagaagaacaagaaaagaaatcatctaaaagaagaagaaaaacagtagat
tctggcaaggttgaaagaaaaaagaaagtcctgaaaaaacatccattgtctgttgtgctt
aaaataaagacaaaagatggtacatgtctacagttaaatttttactacttggtaacctta
gagatagttactgtggtgatgcaattaaaaagtggatctgaatctccaccatcctgtata
tctggaggtgaccttctttcacctgacctacttttgaatgagatatatcctggtgacaat
ggcaacacttcaccaaatgctgccaatcagtatgaattaaggagattaggtttaggagaa
tttaaccagtacattaaggagacaggaaagccatacctgtgggcacagtggttgtcaggg
ttacagtttcttaacaacaacaaaagttcaaaggttgcagattcgtctgtcagttcagaa
aacatgcagcagacgatcaaacgcttaagaagaagaatcaaatcaagattatcacttcta
aagcagctggcatcattagagagagggattattccccttgctccagaagccatgtcatta
tttccaacaaagatagtcgccaaactcacttcctggaagaggtctacctatgaggacttc
tgtgtgctaccttacacagaggaacttgtatcaaatggtctagccaaggagtcagatatc
ttctttactgcagccatggacagaggttcagccaagatgacggcacagattgtaatgacg
cccgattaccctgcagtggcaccactgttccttgttagtttacaatggcaaacagaaaga
tcagctttaaatgacatcaatatacaggaaatggaggaagaggtcaatgttcattacaaa
gagatgattattcacaagtcacatgaccaaattttagccaatcaattacaacgtctgctt
atgtgctttgatgtttatttggagacagaaacacaaaatgctgaagaaggacctaaggaa
atatcaaaagagaaagtttatgctagatttgcaagaggaccaaatagaaccaagccatac
aagttttgtgcagaagttggaatattctcacatcgttaa
DBGET
integrated database retrieval system
