Mytilus californianus (California mussel): 127712088
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Entry
127712088 CDS
T08804
Name
(RefSeq) replication factor C subunit 5-like isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03030
DNA replication
mcaf03410
Base excision repair
mcaf03420
Nucleotide excision repair
mcaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127712088
03410 Base excision repair
127712088
03420 Nucleotide excision repair
127712088
03430 Mismatch repair
127712088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127712088
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127712088
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127712088
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127712088
DNA Replication Termination Factors
ELG1-RFC complex
127712088
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127712088
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127712088
Check point factors
HRAD17(Rad24)-RFC complex
127712088
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_assoc_2
RuvB_N
AAA_22
AAA_24
AAA_5
DUF815
AAA_14
DNAX_ATPase_lid
AAA_16
ResIII
DEAD
AAA_7
Mg_chelatase
PhoH
TIP49
AAA_30
HAM1_N
AAA_2
AAA_19
Gp44_lid
Delta_lysin
nSTAND_NTPase5
bpMoxR
AAA_28
Thiamine_BP
ATPase_2
DUF8067
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
127712088
NCBI-ProteinID:
XP_052074255
LinkDB
All DBs
Position
Unknown
AA seq
333 aa
AA seq
DB search
MTTKEEKATNPNLPWVEKYRPKQLDDLISHKDIISTIGKFVKEERLPHLLFYGPPGTGKT
STILAVAKQIYSPKEFNSMVLELNASDDRGIGIVRGQILSFASTRTIFKSGFKIVILDEA
DAMTRDAQNALRRVIEKFTENTRFCIICNYLSKIIPALQSRCTRFRFGPLGTDQMVPRLQ
HVVTEEGVTITDDGMKALVTLAEGDMRKALNIMQSTHMAYEEVNENNVYTCVGHPLRRDI
ENIVNWVLNENFTTAYRNISDLKTKKGLALQDILTEIHNYVHRIDLPIHVKIHLLEKMAD
VEYRLASGTSEKMQLSSLISAFQAARDLIVAEA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaaaagaagaaaaagctacaaatcctaatttaccatgggttgaaaaatataga
ccaaaacagttagatgacctaatatcacataaagatataatatcaacaattggcaaattt
gttaaagaagaacgattaccacatctgttgttctatggaccaccaggaacagggaagaca
agtactatattggctgtagctaaacagatctactcacctaaagaatttaattctatggtg
cttgagttgaatgcctcagatgaccgagggataggaatagttagaggacaaatacttagt
tttgcaagtacaagaacaatattcaaatctggctttaagattgttatactagatgaggca
gatgctatgaccagagatgcacagaatgccttgagaagagtgatagagaagttcacagag
aataccagattctgtataatatgcaattatttatcaaagatcataccagcattacagtca
aggtgtaccagatttagatttggaccattaggtacagatcaaatggtccctagacttcaa
catgtcgttacagaggagggggtaacaataacagatgatggtatgaaggctttagtcaca
ctggcagaaggtgatatgagaaaagcacttaatattatgcagagtacacatatggcttat
gaggaagtaaatgaaaacaatgtatatacgtgtgttggacatccgttacggagagatatt
gaaaatatagtcaactgggtcttaaacgaaaactttaccactgcttataggaatatatca
gatttaaagacaaaaaaaggattagcattacaagacattctcactgaaatacataattat
gttcatagaattgatttaccaatccatgttaagatccatttattagagaaaatggcagat
gttgaatacagattggcatcaggaacaagtgagaagatgcaacttagttcattgatatct
gcattccaggctgcaagagacttaatagtggcagaagcataa
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integrated database retrieval system
