Mytilus californianus (California mussel): 127712157
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Entry
127712157 CDS
T08804
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04142
Lysosome
mcaf04144
Endocytosis
mcaf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127712157
04142 Lysosome
127712157
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127712157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcaf04131
]
127712157
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcaf04147
]
127712157
Membrane trafficking [BR:
mcaf04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
127712157
Exosome [BR:
mcaf04147
]
Exosomal proteins
Proteins found in most exosomes
127712157
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
HEAT_Nup120
TPR_COPA_B
TPR_Vps41
TPR_PEP5_VPS11
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
127712157
NCBI-ProteinID:
XP_052074388
LinkDB
All DBs
Position
Unknown
AA seq
1681 aa
AA seq
DB search
MTQQLPIRFQEHLQLQNVGINAANIGFSTLTMESDKFICIREKVGETAQVVIIDMNDSSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKSHTMTEEVVFWKWITVNTVA
LVTDVACYHWGMEGDSQPQKMFDRHTNLAGCQIINYRTDAKQQWLLLIGISAQTGQEAAQ
NRVVGAMQLYSTERKVSQPIEGHAAAFSTFKVDNNPNPSTLFMFAVRGAQGGKLHVIEVG
QPPQGNQPFAKKAVDVFFPPEAQNDFPVAMQVSPKHGVSFLITKYGYIHLYDIETGTCIY
MNRISGDTIFVTAPHEATSGIIGVNRKGQVLSVSVEEDNIVQYITNTLNNPDLALKVATR
ANLQGGEDLFVRKFNALFQSGNYAEAAKAAASAPKGILRTPQTIQRFQQVPAQPGQTSPL
LQYFGILLDKGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKPTDPTL
ALSVYLRANVPMKVIQCFAETGQFQKIVLYAKKVNFTPDFISLLRNIMRINPEQGLAFAQ
MLVEDDEPLADLNQIVDVFMEFNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMSAPQ
VADAILGNQMFTHYDKAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNY
FGSLSVEDSLECLKAMLQANIRQNLQVCVQIASKYHEQLTTNGLIEIFESFKSYEGLFYF
LGSIVNFSQDADVHFKYIQAACKTGQIKEVERICRESQCYEPERVKNFLKEAKLTDQLPL
IIVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPARLPVVIGGLLDVDCGEDVIKQLIM
VVKGQFSTDELVEEVEKRNRMKLLLPWLEMRVHEGVNETATHNALAKIYIDSNNNPERFL
RENQFYDSKIVGKYCEKRDPHLACVAYERGQCDMELIQVCNENSLFKSQARYLVKRRDMD
LWAQVLVEDNEFRRQLIDQVVQTALSETQDPDDISVTVKAFMTADLPNELIELLEKIVLD
NSVFSDHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAINNELFEEAFAIFKK
FDVNTSAVQVLIDHVNNLDRAYEFAERCNDPAVWSLLGRAQLDANMVKEAIDSFIKADDP
TNYMDVVNVASKNNSWEDLVKFLQMARKKARETFIETELIYAYAKTNRLADLEEFISGPN
HANITQVADRCFDDKMFEAAKLLYNNVSNYARLAITLVHLKEYQAAVDGARKANSTRTWK
EVCFACVDNEEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELISLLEAALGLERAHM
GMFTELAILYSKFKPEKMREHLELFWSRVNIPKVLRAAEQAHLWSELVFLYDKYEEYDNA
VITMMSHPTIAWKESQFKDIITKVANIELYYKAIQFYLDFKPLLLNELLLVLTPRLDHTR
AVIFFTKVNQIPLVKPYLRSVQKNNNKAINEALNNLLIEEEDYQGLRTSIDAYQNFDNIA
LAQRLEKHELIEFRRIAAYLYKGNNRWKQSVDLCKKDKLFKDAMCYAGESKDIAIAEDLI
AWFLEEQYHECFAACLFQCYDLLRPDVILELAWRHNIMDFAMPYMIQVVREYISKVDKLE
QSEAVRTEEEQKAEERPIVLGEQQLMLTAGPAAMMPPQAPSPVPGYGGQYGVPPNPYGYG
M
NT seq
5046 nt
NT seq
+upstream
nt +downstream
nt
atgacacaacagctgcccatcagattccaggagcatttgcagctccaaaatgttggaatc
aatgctgcaaatattgggttcagtacccttaccatggagtctgacaaatttatttgtatt
cgagagaaagtgggagaaactgcccaagttgtcatcattgatatgaatgattcttctaat
cctataagaagacccatctcagcagactctgccatcatgaaccctgctagcaaagttatt
gcactcaaagctggaaagaccttacagatttttaacatcgaaatgaagagtaaaatgaag
tcccacaccatgacagaggaagttgttttctggaaatggattactgtaaatacagttgcc
ttggtaacagatgtagcttgttatcattggggcatggaaggtgactcccaaccacagaag
atgtttgatcgccacactaacttagctgggtgtcagatcattaactacaggacagatgct
aaacaacaatggctgctgttgattggtatatcagcacagacggggcaggaggcagcacaa
aatagagtagtaggagccatgcagttgtattctacagagagaaaagtcagtcagccaata
gaaggacatgctgctgcattttccacctttaaagtagacaataacccaaatccatcaacc
ctctttatgtttgctgtacgtggagctcagggaggcaagctacatgtaatcgaagttgga
caaccaccacagggtaaccagccatttgctaagaaagcagtagatgtattctttccacca
gaagcacaaaatgactttcctgtagcaatgcaggtcagtccaaaacatggagtatctttc
ttgattacaaagtatggttacattcatctgtatgacattgagactggaacatgtatttat
atgaacagaatcagtggtgacacaatctttgtaacagcaccacatgaagcaacatctgga
ataattggtgtcaacagaaaaggacaggttttatcagtgagtgtagaagaggacaacatt
gtacagtacatcactaacaccttaaacaacccagacttggcactcaaagtagcaaccagg
gccaacctgcaaggtggagaagatctatttgtcaggaagtttaatgctttgttccaaagt
ggaaattatgctgaagcagcaaaggcagctgctagtgctcccaagggtatattaagaaca
ccacagacaatacagagattccagcaggtacctgctcagccaggtcaaacctcaccattg
ttgcagtatttcggtattctgttagacaagggccagttaaacaagtatgagtccctagaa
ttatgtagacctgtgctgcaacaaggcagaaaacagctgttagagaaatggctcaaagag
gacaagcttgagtgtagtgaagaacttggggatctggtaaaacctacagacccaactcta
gctttatctgtttacctaagagctaatgttccaatgaaagtcattcagtgttttgctgag
acaggacaattccagaagattgtattatatgccaaaaaagtcaacttcacgccagatttt
atctcattgttaagaaacataatgagaattaacccagaacagggtttagcttttgcacag
atgttagttgaagatgacgaaccattagctgatctaaatcagattgtggatgtgtttatg
gagtttaacttgatacaacagtgtacatcattcttacttgatgcattaaagaacaacaga
ccatcagaaggtcctctacagactagacttctagaaatgaatttaatgtcagcaccccag
gtagcagatgccatcttagggaaccagatgtttacacactatgataaagcacacattgca
cagctctgtgaaaaagctggacttcttcagagagctttagaacactacacagatttgtat
gacatcaagagagcagttgtccacacacatttgttgaacccagagtggctggttaactac
ttcggatcactgtcagtagaagattcattagaatgtcttaaagccatgttgcaggccaac
atcagacaaaatctacaagtctgtgtgcagatagcatccaaataccatgaacaattaact
acaaatggactcattgaaatatttgaatcatttaagagttatgaaggtttgttttacttc
ctgggatccattgtcaacttcagccaggatgctgatgtacattttaaatacatccaggcc
gcatgtaaaactggtcagatcaaagaagtagagagaatttgtagagaaagtcaatgttat
gaaccagaaagggtcaagaatttcctgaaggaggccaagttaactgaccagctgccattg
atcattgtgtgtgataggtttgactttgtccacgacttggtgttgtatttatacagaaac
agtctacaaaaatatattgaaatatatgtacagaaggtgaacccagctaggttaccagta
gttattggaggtctgttggatgttgactgtggagaagatgtcatcaaacagttaattatg
gtcgtcaaaggacagttctctactgatgaactggttgaagaagtggaaaagagaaataga
atgaagttacttctgccttggcttgagatgagagtacatgaaggagtcaatgaaacagca
acccacaatgctttagccaagatatatatagacagtaataataacccagaaagattccta
agggaaaatcagttttatgacagtaaaatcgtaggtaaatactgtgaaaagagggatcca
catttagcctgtgtagcttatgagagaggacagtgtgatatggaacttatacaggtgtgt
aatgaaaattcactgttcaagagccaagcccgatacttggtcaagagacgagatatggat
ttgtgggcacaagttttagtagaggataatgagttcagaagacagttgatagatcaggtt
gttcaaacagctttgtcagaaacacaagacccagatgatatatccgtgactgtcaaagcc
ttcatgacagcagacttaccaaatgaattgatagaattgttagagaaaattgtcctggat
aactctgtcttcagtgatcatagaaatctacaaaacttgttgatcctgacagccattaaa
gctgaccgtacccgtgttatggaatacatcaacagactagataattacgatgctcctgat
atagctaatatagctataaataatgaactgtttgaggaagctttcgctatctttaaaaag
tttgatgtcaatacatctgctgtgcaggtgttgattgaccatgtaaacaacttggacaga
gcctacgagtttgcagagagatgtaacgatccagcagtatggagtttacttggacgtgca
cagttagatgctaacatggtgaaggaagctatagattcctttatcaaagctgatgatcca
actaattacatggacgtagttaacgtagccagtaaaaataatagctgggaagatttagtc
aagttcttacagatggctcgtaaaaaagcaagagaaacattcatagaaacagaattgata
tatgcctatgcaaagacaaaccgattggcagatttagaagaattcatatctggtcctaat
catgccaatatcacacaggtagcagacagatgttttgatgacaagatgtttgaggctgct
aagcttctatacaataatgtatctaactatgctagactggctataaccctagtccacctt
aaagaatatcaagctgcagttgatggagctagaaaagctaatagtacaagaacttggaaa
gaagtatgttttgcttgtgtagacaatgaagaattccgtttggcccagatgtgtggtctt
cacattgtagtacatgctgacgagttagaagaattaatcaattattatcaagatagagga
tattttgaagaacttatatctctattagaggctgcattaggtttagaaagagcccatatg
ggtatgtttacagaattagcaattttatactcaaaattcaagcctgagaaaatgagagaa
catttagaattattctggtctagagtcaacattccaaaggtattacgagcagccgaacaa
gcccatctgtggtcagaattagtatttttgtatgataagtacgaggaatatgataatgca
gtgataacaatgatgagccatccaaccattgcctggaaagaaagccagttcaaagatatc
ataacaaaagtagcaaacattgaactttattacaaggcaattcaattctacttagacttt
aaacctttattattgaatgaattattactggtgttgacgccaagacttgatcatacacga
gcagtcattttcttcactaaagtcaaccagatacctcttgtcaagccttaccttcgatca
gtccaaaagaacaacaacaaagctataaatgaggctctgaacaacttattaattgaagag
gaggattaccagggcctgagaacatctatcgatgcataccagaactttgacaacatagca
ttagcccagagattagaaaaacatgagttaatagaattcagaagaatagctgcgtacttg
tacaaaggtaacaacagatggaagcagtcagttgacctttgtaaaaaggataaattattt
aaggatgcaatgtgttatgctggagaatctaaagacattgctattgctgaagacctgata
gcctggttcttagaagagcaatatcatgagtgttttgctgcatgtttgttccaatgttat
gatttattacgaccagatgtgatacttgagttggcatggagacacaatattatggatttt
gccatgccatacatgattcaggttgtgagagagtatatatcaaaggttgacaagttagaa
caatcagaagctgtcaggacagaagaagaacaaaaggcagaagaaagaccaattgttctt
ggtgaacaacagctgatgttaacagcagggccagctgcaatgatgccaccccaggctcca
tcacctgtaccaggctatggtggccaatatggtgtaccacctaacccatatggctatggc
atgtaa
DBGET
integrated database retrieval system
