Mytilus californianus (California mussel): 127712229
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Entry
127712229 CDS
T08804
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03030
DNA replication
mcaf03410
Base excision repair
mcaf03420
Nucleotide excision repair
mcaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127712229
03410 Base excision repair
127712229
03420 Nucleotide excision repair
127712229
03430 Mismatch repair
127712229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127712229
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127712229
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127712229
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
127712229
DNA Replication Termination Factors
ELG1-RFC complex
127712229
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
127712229
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
127712229
Check point factors
HRAD17(Rad24)-RFC complex
127712229
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
AAA_14
Viral_helicase1
Rad17
AAA_11
AAA_24
AAA_assoc_2
AAA_18
Mg_chelatase
nSTAND3
DNAX_ATPase_lid
AAA_19
RuvB_N
MipZ
AAA_25
AAA_5
AAA_28
AAA_30
bpMoxR
RNA_helicase
SLFN-g3_helicase
ABC_tran
AAA_23
MeaB
MCM
AAA_3
ATPase_2
NTPase_1
FtsK_SpoIIIE
MDD_C
DUF815
CbiA
Motif
Other DBs
NCBI-GeneID:
127712229
NCBI-ProteinID:
XP_052074519
LinkDB
All DBs
Position
Unknown
AA seq
344 aa
AA seq
DB search
MSETQEMEIEESVPQKPTPKTTYEMPWVEKYRPVKLHSIVGNDETISRLEVFAREGNVPN
IIIAGPPGTGKTTSILCLARALLGTSFRDAVLELNASNERGIDVVRNKIKMFAQQKVTLP
KGRHKIVILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYS
KLTDQQVLKRLLEVCEEEKVSYTDDGLEAIVFTAQGDMRQALNNLQSTFQGFGHVNSENV
FKVCDEPHPVLIKDMLQHCVNGNIDEAYKTMAHLWRLGYSPEDIITIVFRVCKNHSMPEF
LKLEFIKEIGYTHMRIAEGVNSLLQMAAMLARLCKKSGTPSPLS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacacaagaaatggagatagaagagtcggttccccagaaacctactccaaaa
actacatatgaaatgccttgggttgaaaaatacagaccagtcaaattacacagcattgtt
ggtaatgatgaaaccattagcagactagaagtatttgctagagagggaaatgtcccaaac
ataataatagcgggtcctcctggaactggaaaaacaacaagtattctttgtttagccaga
gctcttttgggaacctcattcagagatgcagtacttgaactaaatgcatctaatgaaaga
ggaattgatgtggtgagaaacaaaataaaaatgtttgcccaacagaaagtaacattgcct
aaaggtcgacacaaaatagttattctggatgaggcagacagtatgacagatggtgcccag
caagctttaagaagaacgatggaaatttactcaaaaacaaccagatttgccttagcttgc
aatgcttcagataaaataatagaacctattcagtccagatgtgcagttctcagatattcc
aaactgacagaccaacaggtactaaagagattattagaagtgtgtgaagaagaaaaggtc
agctatactgatgatggattggaagctattgtgtttacagcacagggtgatatgagacag
gcattaaacaatttgcaatcaacatttcaagggtttggtcatgtaaatagtgaaaatgtt
ttcaaggtttgtgatgaaccccatcctgttcttatcaaagacatgttacaacattgtgtc
aatggtaatatagatgaagcgtacaaaacaatggcacatttatggagacttggctattct
cctgaagatatcatcaccattgtattcagagtctgcaagaatcacagtatgccagaattt
ctcaaattagaatttataaaggaaataggttatacacatatgaggattgctgaaggagta
aattcattattacaaatggctgccatgctagctagactgtgtaaaaaatcaggaacgcca
tcacctttaagttga
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integrated database retrieval system
