Mytilus californianus (California mussel): 127712643
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Entry
127712643 CDS
T08804
Name
(RefSeq) transcription elongation factor SPT6-like isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127712643
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127712643
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
127712643
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127712643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
Tex_YqgF
SH2
HHH_9
Tex_N
OB_RRP5_4th
YmaF
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
127712643
NCBI-ProteinID:
XP_052075156
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MDFLEEEAEEESSLSSDGGKVVESGEEDSDAVEGRKKKKVKKKKKQRIIDDDDSDEEEDE
EEDEAQIQEEMKDFIKDDVEEEAEEESGDEGGKRKHEDSDIDDRLEDEDYDLIEENLGIK
VKRKPKHKRIRVLSEDEDSDRGEEEGDKGREAVAEQLGFDSDVGEGEEPSQPAETDYQNL
VESEEEEDEMAGFIVDEDGEPIHGQRKKKKHIIHSDSALQEAQEIFGVDFDPGEFEDFGP
EEEEDFEDEYADEDDEDMEGKRKKDRRKKRSKMGIYDVYEPTELERGFFTDKDQEIRSAD
IPERFQLRQIPVKPTEEGELEEEAEWIYKQAFVTTTVTQQGFMEQDNHGRNHSTVNKIRE
AINFMRNQQFEVPFIAFYRKEYVEPDLHINDLWKVWHWDEKWTQLRSRKENLIVLFEKMQ
NYQFDMNSDPDQVLASNVRPLTDEDVDRVRQVQTLEELRDVYQHFLLYYGTDLPKMRNAE
KRKAKEASESQEGEDQEKKDDDIHDSMKQASRKNGYTICTRNKLDDIAMKFGLTPEQFGE
NIRDNYQRNEVEQFPIEPLELAKDFISNQFPTEEDVMLGARHMVAMQIAHDPLVRQSVRQ
TYFERAKIKVTPSRKGIKEIDEEKPTYSMKYLKNKPIRDLKDDQFLKLTQAEDDGLLTIE
MYIDEQGEGRQTYFEEIRQLYYRDEFSHLVQQWNSQRSQALERALTKILYPQMEKELRSK
MLAESKEGIVKACCRKLYNWLKVAPYQADQQLYEDNDYDEKDGIRVLGIGFSTDHDRDLD
TASFGALIDGEGQVTDFIKLVSLIKSRRAWRTVDREGKANDLKRLKEFIADKKPHVVAVT
AESRDALSIIEDIKKIIDDLCQEQAIAPINVELVDNEVAMIYENSNKGKSDFREYPVVLR
HAVSIARRLQDPLIEFAQLCNPDEDILCLKYHPMQDCVTKDELQNALTLEFVNRVNEVGV
DVNRALDYPHTSLLLQFVCGLGPRKGSNLLRILKQTNQKLENRTQLVTHCHIGPKVFINC
AGFIKIDTLKFSDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDDTAEGANPAGALEE
ILESPERLKDLDLDAFAEELERQGYGDKHITLYDTRAELNHRYKDLRTPYRSPLNEEIFN
MITKETPETFYVGKLVLARVAGIAYRRPRGEQLDQANPVRDEETGLWQCPFCNRNDFPEL
SEVWSHFDAGSCPGSAVGVKCRLDNSVNGFVHTKNISDKNVKNPADRVQIGMTIHCRITK
IDIDRFQVDLTCKSSDLMDKENQWRPQKDLYYDADHETADKTKEETKKKQQARQSYVKRV
IAHPSFHNIGYKECEKILANMDQGEAIIRPSSKGADHLTVSWKIADDIIQHIDIKEEGKE
NAFSLGSSLWIGGEEFEDLDEILARFIQPMAAYARDILNFKYYRMAENGKRELLDKVLHE
EKKKAPSKIPYFCSLSKQYPGKFLVSYMPRTKPRHEYATLSSEGIRYRNQMFHSLNSMMR
WFKEHFRDPIPGTPASRTPGMASSTYATPSINLQGVDAATIQRAAAGLPNNIYNTLAQVA
GATPRVGTPRVARMTPGATPQQFPPVAGFSGGFGLGATPMMTPMMTPSHHITTPAGHPTP
SYNPTPRQPHTPAWPGHTPRATPRTPSHPPSQRAMGPTAGTDWAKAAEMWAKGRPSKSTP
RASPAVHRNSPMPTGDSTPLFDER
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggacttcctggaggaagaggcagaggaagagtctagtttgtcatctgatggagggaaa
gttgtagaatcaggggaagaagactcagatgctgtagagggaaggaagaagaaaaaggtg
aaaaagaagaaaaaacaaagaattatagacgatgatgattctgatgaagaggaagatgaa
gaggaggatgaagctcagattcaagaagaaatgaaagattttattaaagacgatgtagag
gaagaagctgaagaagaaagtggagatgaaggagggaagaggaaacatgaggattcagat
atagatgatcgactagaagatgaagattatgatcttatcgaggaaaatcttggtatcaaa
gttaaaagaaagcctaaacataaacgtattcgagttttgtcagaagatgaagacagtgac
agaggtgaagaagaaggcgacaaaggcagggaagctgtcgctgaacaacttgggtttgat
tctgatgttggtgaaggggaggagccatctcagcctgctgagaccgattatcaaaacttg
gttgagtcggaggaagaagaagatgaaatggctggatttattgttgacgaggatggtgag
cctattcatggccagagaaagaagaaaaaacacatcattcattctgattctgctctgcaa
gaagcacaagagatttttggcgtggacttcgacccaggtgaatttgaagactttggacct
gaagaagaggaagattttgaagatgagtatgctgatgaagatgatgaagacatggaagga
aaaagaaagaaagatagaagaaagaaaagatcaaaaatgggtatatatgatgtttatgaa
cccactgagctggagagaggatttttcacagataaagatcaggagataagaagtgctgat
atccctgaacgatttcagttacgacagattccagtcaaacctacagaggaaggagaactg
gaagaggaggcagagtggatatataaacaggcatttgtaacaactacagtcacacaacag
ggttttatggaacaagacaaccatggtagaaatcacagtacagtcaataaaatcagagaa
gctattaacttcatgagaaatcaacagtttgaggtaccattcattgccttctacagaaaa
gagtatgttgaaccagacttacatatcaatgatttatggaaagtttggcactgggatgaa
aagtggacccagttaagatcaagaaaagaaaatctgattgttttatttgagaagatgcag
aattatcagtttgatatgaactctgaccctgaccaggtcttagcatccaatgtgaggcct
ctaacagatgaagatgttgatagagtgaggcaggttcagactttggaagagttaagagat
gtgtaccagcacttcctgttatattacggtacagatctacctaaaatgaggaatgcagag
aagagaaaagccaaagaagcatcagaaagccaggaaggagaagatcaagagaaaaaagat
gatgacattcacgattccatgaagcaagcttcaaggaagaatggttacacaatctgtacc
agaaataaattagatgatatagctatgaagtttggtctgacaccagaacagtttggagaa
aacatccgagataattatcaaagaaacgaggtggaacaatttccaatagaacctttagaa
ttagcaaaggattttatcagcaatcagtttcctacagaagaagatgtgatgttaggtgcc
agacatatggttgccatgcagattgcccatgatcctctagtcagacaaagtgtgagacag
acttattttgaacgagccaagataaaagttacgccatcaaggaaaggcattaaggaaatt
gatgaagaaaaaccaacgtatagcatgaaatacttaaagaataaaccaatcagagatctg
aaagatgatcagttcctgaagctgacacaggctgaagatgatggtttattaacaatagaa
atgtacatagatgaacaaggtgaaggtcgacagacatactttgaagaaattagacaactt
tactatagggatgaattcagtcacttggtacagcaatggaactcccagagaagtcaggct
cttgaaagagctttaacaaagatcttatatcctcagatggagaaagaactcagatctaaa
atgttggcagaatctaaagaaggcattgtaaaggcctgttgtagaaagttatacaattgg
ttgaaggttgccccgtaccaagctgatcaacagttatatgaagataatgactatgacgaa
aaagatggcatccgtgtgctaggcataggtttctctactgaccatgatagagatcttgac
actgcttcttttggtgctttaattgatggagaaggacaagtcacagatttcataaaactt
gttagtttgataaagagccgacgtgcctggagaacagttgatagggaaggaaaagcaaat
gatttgaaaaggctgaaagaatttattgcagataagaaaccacatgttgtagcagtcact
gcagaatcaagggatgccttgtctataatagaagatataaagaaaatcatcgatgatttg
tgtcaggaacaggctatagctcccatcaatgtagaactggttgataatgaagtggctatg
atatatgagaatagcaataaaggaaagagtgatttcagagaatacccagtagtgttacga
catgctgtctccatagccagacgtttacaggaccctcttatagagtttgcacagctatgt
aaccctgatgaggatatattatgtctcaagtaccatccaatgcaggactgtgtaacaaag
gatgaactgcagaatgcattgaccctggagtttgtgaaccgtgtgaatgaagttggtgta
gatgtgaacagagctttagattatccacacacgtctctacttttacagtttgtgtgtgga
ctgggaccaagaaaagggagcaatctcctcaggatattaaaacaaacaaatcagaagcta
gagaacagaacacagctcgtcacacattgtcatataggaccaaaagtattcattaactgt
gctggatttatcaagatagatactctcaagttttcagattcgacagacagttacattgaa
gtgttagatggatctcgtgtacatcccgagacttatgaatgggcacgtaagatggctgtt
gatgctctagagtatgatgacacggctgaaggtgctaatcctgctggagcactggaagaa
attttagaaagtcctgaaagactcaaagatctggatttggatgcctttgctgaagaactg
gaaagacagggttatggtgataaacacattacactttatgacaccagggcagaattaaat
catcggtacaaagatctgagaacaccatatcgatccccattgaatgaagaaatatttaat
atgattacaaaagaaacaccagaaacattttatgttggtaaattagtgctagctagagtt
gcaggtattgcctacagaagacctcgcggtgaacagttagaccaggccaatccagtcagg
gacgaggagacagggttgtggcagtgtcctttctgtaacagaaatgatttcccagaactt
agtgaggtttggagtcattttgatgcaggaagctgtcctggctcagcagttggtgtgaag
tgtcgactagataattctgtcaatggttttgtacataccaaaaatatcagtgataaaaat
gtaaagaatcctgctgacagagtgcagatcggtatgacaattcactgtagaataactaag
atagatatagacaggttccaggtagatctgacatgtaaatcctctgatctgatggacaag
gaaaatcagtggaggccccagaaagatctatactatgatgctgatcatgaaacagctgat
aaaacaaaggaagaaacaaagaaaaagcagcaagctagacaatcatatgtgaagcgtgta
attgcacatccttccttccataatattggttataaagaatgtgagaaaatcttggcaaac
atggaccaaggggaggcaatcattagaccaagtagtaagggagcagatcatttgactgtt
tcatggaagatagcagacgatattatacagcatattgatattaaagaagaaggcaaagag
aatgcttttagtctgggatcgtcattatggataggaggagaggaatttgaagatttggat
gaaatattggcacgattcattcagccaatggcagcatatgcacgagatattttaaacttt
aaatactacagaatggcagagaacggtaaaagagaactgctagacaaagtattacatgaa
gagaaaaagaaggcaccctcaaagattccctacttttgcagtttgtctaagcaataccca
ggaaagtttctggtatcctacatgccaagaacaaaacccagacatgaatatgccacactc
tcatcagagggaatcagatataggaaccaaatgttccattcacttaattctatgatgaga
tggtttaaagaacatttcagggatccaattccaggtactcctgctagtagaactccaggc
atggcatcctcaacatatgctactcccagtattaatttacaaggtgtggatgctgccaca
atacagagagcagctgctgggttacctaataatatctacaacacacttgcccaggtggct
ggagccacaccacgagtgggcacccctagagttgctagaatgacacctggagctacacca
caacagttccctcctgtggctggattcagtggaggctttggtctcggagccacccccatg
atgaccccaatgatgacaccatctcatcacatcacaacgccagctggacaccctacccca
tcatacaaccccacccccagacagccacacacaccagcttggcctgggcacacaccaaga
gccacaccacgaacaccatcacatccaccatctcagagagccatgggacccacagcagga
acagattgggccaaagctgcagaaatgtgggctaaaggtagacccagtaagtcaactcct
agggctagcccagctgttcacagaaatagtccaatgcctactggagattcaacgccatta
tttgatgaacggtga
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integrated database retrieval system
