Mytilus californianus (California mussel): 127712730
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Entry
127712730 CDS
T08804
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03082
ATP-dependent chromatin remodeling
mcaf03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127712730
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127712730
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcaf01009
]
127712730
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127712730
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127712730
Protein phosphatases and associated proteins [BR:
mcaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127712730
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127712730
SWI/SNF complex
127712730
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127712730
PBAF complex
127712730
SWI/SNF complex
127712730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
127712730
NCBI-ProteinID:
XP_052075299
LinkDB
All DBs
Position
Unknown
AA seq
375 aa
AA seq
DB search
MASNMFGTKTFGEKPQKFQIEEGEEYYYVGSEVGNYLRMFRGSLYKRYPSLWRRLMTVEE
RKKVSTLGSGQPALATNITLLKGSEVDQIFEGNDEKFKTLSINSEPTFNTSGLKQKRGSN
WVPTVPSSSHHLDAVPCSTPINRNRLGKSKVRTFPTCFDDSDPAQIHDNSNQPEQLIPIR
LDMEIDGQKLRDCFTWNKNEGLVSPEQFAEILCDDLDLNPINFVPAISQAIRQQIDAYPT
DNLLDQQSDQRVILKLNIHVGNISLVDQFEWDMSEPDNSPEEFANKLCAELGLGGEFVTA
ISYSIRGQLSWHQRTYAFSEAPLPTVEVAIRNQNEADSWCPFLETLTDAEMEKKIRDQDR
NTRRMRRLANTAPAW
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaaatatgtttgggacaaagacatttggtgaaaaaccacaaaaatttcagata
gaggaaggcgaagaatattattatgtcggatcagaagttggaaactatttgcgtatgttc
cgtggatccctttataaacgctatccctcgttatggagaagattaatgacagtggaagag
agaaagaaagtctccaccttaggaagtggacagcctgcattggctacaaatataactctg
ttgaaggggtcagaagtagaccagatatttgaaggcaatgatgaaaaatttaaaaccttg
tcaatcaacagtgaacctacttttaatacaagtgggctgaaacagaaaaggggaagtaac
tgggtaccaacagtacctagtagttctcatcaccttgatgctgttccctgttctactcct
ataaatagaaacagacttggaaaatctaaagtacggacattccctacatgttttgacgac
tctgatcctgctcagatccacgataattctaaccaaccagaacagctgataccaattaga
ctcgacatggaaatagatggacagaaacttcgagattgcttcacttggaataaaaatgag
ggtttggtctcacctgaacagtttgctgagatcctatgtgatgatttagatctgaatcct
attaattttgtccccgctatatcacaagctatcagacaacagattgatgcctatcccaca
gataatttgttagatcaacaatctgaccagagagttatattaaagctaaatatacatgtt
ggtaatatatctctggtagatcagtttgaatgggatatgtctgaaccagataactcacca
gaagaatttgccaataaattatgtgctgaattaggtctaggtggtgaatttgttacagca
atctcatatagtataagaggacagttaagttggcatcaaagaacttatgctttcagtgaa
gcaccattaccaacagtagaagtagccattagaaaccaaaatgaggctgattcttggtgt
ccatttctagaaacattaactgatgctgagatggagaaaaagatcagagatcaagataga
aacacaaggagaatgagaagattagccaacacagcaccagcatggtag
DBGET
integrated database retrieval system
