Mytilus californianus (California mussel): 127713093
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Entry
127713093 CDS
T08804
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03030
DNA replication
mcaf03420
Nucleotide excision repair
mcaf03430
Mismatch repair
mcaf03440
Homologous recombination
mcaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127713093
03420 Nucleotide excision repair
127713093
03430 Mismatch repair
127713093
03440 Homologous recombination
127713093
03460 Fanconi anemia pathway
127713093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcaf03000
]
127713093
03032 DNA replication proteins [BR:
mcaf03032
]
127713093
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127713093
Transcription factors [BR:
mcaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127713093
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
127713093
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
127713093
MMR (mismatch excision repair)
127713093
DSBR (double strand breaks repair)
HR (homologous recombination)
127713093
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
CompInhib_SCIN
Motif
Other DBs
NCBI-GeneID:
127713093
NCBI-ProteinID:
XP_052075679
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MAPDLTSGAIEAIVGGNTFDRPVLQIISSKKITAAGSSADRYRLLLSDGLHSYSHAMLAT
QLNNLMESGEMDNLAVVQVDKYLCNTIQGDRRVLILLDLNVIAKGSDVGVRLGNPQQFKP
GEVRNENAAQPNGQPVAQVQSPVKKEQPSNTSNGPTSAYNSRPPQNTGSNFRQGNNPPAS
NYSIKAAPGTPGTPGSTRVHSIASLTPYQNRWRIRARVTQKSGIRTWSNSRGEGRLFSVN
FLDESGEIRATGFNEAIDKYYDMLEVNKVYFVSRGTLKTANKQYSNVNNDYEMTFNNDTT
VEVCTDDVDLPTVKFEFTKINELESKAPGNNIDLIGVVRSCGDVGTVIGKASQKEITKRE
VQLCDQSGMVVNLTLWGNEAQTFDGSGCPVLAVKGAKLSDYGGRSASVLASSQMLINPDI
KEAHILRGWYDRDGQSSEFQTYRSEGGGAGGGGSSTNWKCFSEIKADNSIGQGDKADYFT
SKGTVIFLRKENSMYKACPKEACNKKLIDQGNGMFRCEKCNHEVPNFKWRMILSANLADF
SDNQWVTCFQESAELILGKPADELGDLKDTNEAAYDQAFQDAMFKSYIFRLRAKIETYND
ESRLKTVCVNATPVDWAEQSRRLIEEIEKLQAS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggctccagatctaacatcgggtgctattgaggctatagttggtggaaacacatttgat
agacctgtcttgcagattattagctcaaagaagataacagcagcaggatccagtgcagat
agatacagactccttctatcagatggactacacagttattcacatgccatgttggccaca
caactgaacaacttaatggagtcgggggagatggacaatttagcagtggtacaagttgac
aaatatttatgtaatacaatccagggagacagacgtgttttgatactcctagatcttaat
gttatagccaaaggtagtgatgtaggagtgaggctgggaaaccctcagcagtttaaacct
ggggaagtgagaaacgaaaatgcagcacaaccaaatggacagcctgtagcacaagtacag
tcccctgttaaaaaagaacagccatcaaatacatcaaatggaccgacttcagcctacaat
agtagacctccacaaaacacaggttctaacttcagacaaggtaataatccaccagccagt
aattattcaataaaggcagcccctggaacaccaggtacaccaggcagtacaagagtccat
tctattgccagtctgacgccatatcaaaacagatggcggatcagggctcgagtaacacaa
aaatctggtatcagaacatggagtaattctcgaggagagggcagactgtttagtgttaat
ttcttggatgaatctggagaaatcagagctacagggtttaatgaggctattgataaatac
tatgacatgttggaagttaacaaggtttattttgtcagcagaggaacgttgaaaacagca
aacaaacaatatagtaatgtaaataatgattatgaaatgacatttaataatgatacaaca
gtagaagtgtgcactgatgatgttgatttaccaactgtcaaatttgaatttacaaaaatt
aacgaattggaaagtaaagcacctggcaataatatagatctgattggagtcgttagatct
tgtggggatgttggtacagtgattggtaaggctagtcagaaggagattaccaaaagagag
gtccagttgtgtgaccagtctggcatggtcgttaatctgacattgtggggaaatgaggcc
caaacgtttgatggctctggttgtccagtattggcagtaaaaggagcaaagctgtcagat
tacggaggtcgttcagcatcagttttggcatcaagtcaaatgttaataaacccagacatc
aaagaagctcatatattacgaggatggtatgaccgtgatggacagtcatcagagttccag
acttaccgtagtgaaggtggtggagcaggtggtggaggttcttctaccaactggaaatgt
ttcagtgaaattaaggctgacaacagtattggtcagggagataaggctgattatttcacc
agtaaaggaactgttatattcttacgtaaagagaactctatgtataaggcttgtccaaaa
gaggcttgtaataagaaactcattgaccaaggaaatggtatgtttagatgtgaaaaatgt
aatcatgaagtgccaaactttaaatggagaatgattttatctgcaaatctggcagacttc
tctgacaaccagtgggtaacttgtttccaggagtcagctgaacttatactaggaaaacca
gctgatgagttaggagaccttaaagatacaaatgaggcagcatatgaccaggcatttcaa
gacgcaatgttcaaatcgtatatcttccgattgcgagcaaaaattgaaacgtataatgat
gaaagcagactaaagacagtatgtgttaacgctacacctgtagactgggcagaacaaagc
agaagattgatagaagaaattgagaagttacaggcatcatga
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