Mytilus californianus (California mussel): 127715627
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Entry
127715627 CDS
T08804
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03440
Homologous recombination
mcaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127715627
03450 Non-homologous end-joining
127715627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127715627
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127715627
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127715627
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127715627
BRCA1-C complex
127715627
NHEJ (non-homologous end-joining)
MRX complex
127715627
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SbcC_Walker_B
SMC_N
AAA_21
AAA_15
AAA_29
ABC_tran
AAA_16
AAA_13
ATG17_like
Motif
Other DBs
NCBI-GeneID:
127715627
NCBI-ProteinID:
XP_052077691
LinkDB
All DBs
Position
Unknown
AA seq
1313 aa
AA seq
DB search
MSSIDKMSVQGIRSFGPDDKEKQIIQFFTPLTLILGPNGTGKTTVIEALKYITTGVMPPG
ATRGGAFVHDPKFANEREVKAQIRLQFHDVSGQMTIVQRSMTATQKLKQVTLKTLDGVIT
RRNAAGEKKSISSKCAEIDKEMITALGVSKPVLENVIFCHQEEANWPLSEGKQLKDKFDD
IFASTRYVKALETIRKLKMSQDSTVKEYRIETTYLKQHKDKASQLEGDLNEVQSKLMASK
ESVNSIVSKLDPIENKLSQIGAKSDDIYRLQNNITKHTSEKKEMERTVEELQKNIENEFQ
GSVEELKRVLAEFQNKVQEREDTLSQFKQQSRELERECEQLNKKKSDLLLQVGKLEQEAQ
VHDNNITKRNILIEQFADKYQFEGFSGCEITDEKYRSFIESVRNKLETMVTEGKNLKMDF
EEKEKKVQIKIDELKENKTKLEQSEHIKKNMMKDNNAKVKQINQKLSQVDASAGKLEQLT
RELKRAEHDLKSTEGTVDIPKLKQEIDQLAKDKLELDAKISQLSSEMNRLHLQSSAQAQI
DVLKKDKASKEENIRRLKAKQEDTISYLLGHMPTTNIRTQIDDYIGKQTESVKTLRHEVH
QSKNQLSTKEAEKKMISETLRKKEEDLKNLEEKIFSVCGSQNFDDGLLTFKEKMSQTQDT
RGSLLGAEHFFKKYATDLEKDDPCCPLCHREFDTDQEVKELVIELKNKLRMVPAKLQKAE
KDLDEFRKKYDSMMQLKPLKENISTLTNKEIPELKSKLKKLNEDIGTLRTTIEEKEDDLQ
TKEGDEDMAKQVQPDVVQIDRYHGEVIELDKKITAQQSTLSGGGSDRTLQDVIDEKEDHQ
MKVDTITKNLDRKRQKINDHSEELARLKSQINTLKEEKLQIDSDLQQRYKLEEDKATLLS
ESDQIQREIQEASEQIRPLQNQIEKKISEKEIITAEKEDKIEQAKSHVDMLKNDASKVKN
VNQEIKSYINQGKAETLGEIRKKKEQVETKTEKKETEKKEVNQNITKIQNDLATQQTRER
ELLDNLQLRKKTKEIDDVQQKIAELKEQLGDIDVTHLDRERKRLQTQQEELMKEKHHAEG
RQRGFEDQIRNIKTELKSDMYKGAPQKFRDKMIVLRTTELAITDLEKYYKALDTAIMRYH
SLKMEEINKIIRELWRNTYRGNDIETIEIRSDEDEGGIMKTRRNYNYRVVMIKGDTALDM
RGRCSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAFALVEIIKGRI
HQKNFQLVIITHDEDFVELLGRSEYVDEFFKVRKDQSGYSQLVRARVGELHSR
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccattgataagatgagtgtccagggtataaggagttttggacctgatgacaaa
gaaaaacaaattatacagttctttactcctttgactctaattttgggtcctaatggtact
gggaaaactactgtaatagaagcactgaagtacataacaacaggtgtcatgcccccagga
gctaccagagggggagcttttgttcatgatcctaagtttgccaatgaaagagaagtaaag
gctcaaatcaggttacagttccatgatgtatcagggcaaatgaccatagtacagcgtagt
atgactgctactcaaaagttgaaacaagtaaccttaaagacgttagatggtgttataacc
agaagaaatgctgctggagagaagaaaagtatcagctctaaatgtgcagaaattgataaa
gagatgattacagcattaggtgtatctaagcctgtattagagaatgttattttctgtcat
caggaggaagcaaattggcctttaagtgaaggaaagcagttaaaagacaagtttgatgac
atatttgcctcaacaagatatgttaaagctctggaaacaatcagaaaactcaaaatgtca
caggattccactgtgaaggaatacaggatagaaacaacctatctaaagcagcacaaagac
aaggcttcacagcttgaaggtgatttgaatgaagtccaatcaaagttgatggcatccaaa
gaatcagtaaacagtatagtatctaagttggatccaatagaaaacaaattgagtcaaatt
ggtgccaagtcggatgatatctacagactacaaaataatataacaaagcatacaagtgaa
aaaaaagaaatggaaagaactgtagaggaattacaaaagaatatagaaaatgaatttcaa
ggttcagttgaagaattgaagagagttttagctgagttccagaacaaagttcaggagaga
gaagatactttatctcaatttaaacagcaaagcagggaactagaaagagaatgtgagcag
ttaaataaaaagaaaagtgacctgttacttcaagtagggaaattagaacaggaggctcag
gtacatgataacaatattacaaagagaaatatacttatagaacagtttgctgacaagtac
caatttgaaggttttagtggatgtgaaataacagatgaaaaatacagaagttttattgaa
agtgtaagaaacaaactagaaaccatggttactgaaggaaaaaatctaaagatggatttt
gaagaaaaggagaagaaagtccaaataaaaatagatgaactgaaagaaaataaaacaaag
ttggagcagagtgaacatataaaaaaaaatatgatgaaagacaataatgccaaagtgaaa
cagattaatcaaaagttgagccaagtagatgcttcagctggaaaactagaacaactgaca
agggaactcaagagagcagaacatgacttgaagtccacagaaggtacagtagacattccc
aaactgaaacaagagattgaccagctagctaaagataaactagaactggatgccaaaatc
agtcaacttagctctgaaatgaatcgattacatttacagtccagtgcccaggcacaaatt
gatgtactgaagaaagacaaggcatcaaaagaagagaatattaggagattgaaagccaaa
caagaagatacaattagttatttacttggacacatgcctaccactaatatcaggacacag
atagatgattatattgggaagcaaacagagagtgtgaagactttaagacatgaagtacat
caaagtaaaaatcaactgtctaccaaagaggcagagaaaaagatgatcagtgaaacactg
agaaagaaggaagaggacttgaaaaatttggaggagaagatcttcagtgtttgtggaagc
cagaactttgatgatggactactaacatttaaagaaaaaatgtcacagactcaagataca
agaggttctttgcttggagctgaacatttctttaagaagtatgccacagatttagagaag
gatgatccctgctgtcctttatgtcacagagagtttgacacagatcaggaagtcaaagaa
cttgtcattgaattgaaaaacaaattaaggatggttcctgccaaactacagaaagcagag
aaagatctagatgagttcagaaagaaatatgactcaatgatgcaacttaaacctttaaag
gaaaatatctcaacattgaccaataaagagattccagaacttaaatccaaattgaagaaa
cttaatgaagatatagggacattgaggaccaccattgaagagaaagaagatgaccttcag
acaaaggaaggtgatgaggatatggctaaacaggtccaaccagatgtagtgcagatagat
cgttaccatggggaggtaatagaactagacaagaagataacagcacagcagtcaacatta
tctggtggtggttcagacagaacattacaggatgttattgacgagaaagaagatcatcag
atgaaagttgataccattaccaagaacctggataggaaaagacaaaagataaatgatcat
tctgaggaattggcacgtttgaaaagtcaaataaatacattgaaggaagaaaagcttcag
attgacagtgatttacaacagagatacaaattagaagaagataaagccacacttctgagt
gaaagtgaccagatacagagagaaattcaggaagccagtgaacagattagacctctacag
aatcagatagaaaaaaagatatcagagaaagaaatcattactgcagagaaggaagataaa
atagaacaagccaaatctcacgttgatatgttaaagaatgatgcttctaaagtaaaaaat
gttaatcaagaaattaaaagctatatcaaccaaggcaaggctgaaacattgggagaaata
aggaaaaagaaagaacaagttgagacaaagacagaaaagaaagaaactgagaaaaaagaa
gtcaaccagaatataacaaagatacagaatgatctagcaacacaacaaacaagagaaaga
gaactattagataacctacagctaagaaagaaaacaaaggagatagatgatgtacaacaa
aaaatagcagaattaaaggaacagttaggagatattgatgtgacacatctagatcgagaa
cgtaaacgtctgcagacacaacaagaggaattgatgaaagagaaacaccatgcagaagga
agacagcgaggttttgaagatcagatcagaaacataaagacagaactgaagtctgatatg
tataaaggagcacctcaaaagtttagagacaaaatgattgtgttgaggacaacagaattg
gctataactgacttagagaagtactacaaagctttagatacagctatcatgagataccac
agtttaaaaatggaggaaataaataaaatcatcagagaattatggagaaatacctacaga
ggcaatgacattgaaacaattgaaattcgctcggatgaagatgagggaggcataatgaaa
acaagacgtaattataattatcgtgtggtgatgataaaaggtgatactgccctggatatg
aggggcagatgtagtgctggacaaaaggtgttagcctcattgataattagattagcatta
gcagagacattttgtttgaattgtggtattctggcattagatgaaccaacaactaacctt
gacagagaaaacattgaaagtctggcttttgcactggtagaaattatcaagggaagaatc
caccaaaaaaatttccagttagtaattattactcacgatgaagattttgtcgagttgtta
ggaagatcagaatatgtggatgagttcttcaaggtcagaaaagatcagagtggttattca
cagttagtgagagctagggttggagagctacattcaagatga
DBGET
integrated database retrieval system
