Mytilus californianus (California mussel): 127715725
Help
Entry
127715725 CDS
T08804
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03013
Nucleocytoplasmic transport
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127715725
09122 Translation
03013 Nucleocytoplasmic transport
127715725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127715725
03041 Spliceosome [BR:
mcaf03041
]
127715725
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127715725
Spliceosome [BR:
mcaf03041
]
Complex C
Other components
EJC/TREX
127715725
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127715725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
127715725
NCBI-ProteinID:
XP_052077847
LinkDB
All DBs
Position
Unknown
AA seq
1595 aa
AA seq
DB search
MAAMVLADVNSKSWDKSVKHDFLKQCKSFVNDNKLWTPGPKSLKQAFYDLCSVVSKGHVK
QEQAVSVITDLCDYKKEVPLLLVDVFSIFDIETTCSEDKQERDRFISLVSAVEGLIAPTV
FKERLDFDTLENVGLISSRQQYQAKYVKTKTRLFYKQMKFNLLREENEGYAKLVVELNQE
ITEKITPLQVIENLKSLIGCFDLDPNRVLDILLESFENRPEHDQFYIPMFREYVSEPKTL
CNIMGFKFKFYASEETPQSLYKMAAVLLENGLVDLDLLYPHLSPADSKIWEFHEKDVNNA
KAHARKLNIVSLADKTEDKKTDEEAIIDVHSTNQKLGLCGELLQFGCWSSVKQILDRLPE
FFATSYRPVTMKLCETVHKMMESFYRENCGIPKKILKGKIKQDKKVPQVNSYRELHLQVF
SILRYLGPYTAYDPVLIAKIIRLGKTFMSKRQDGGITPEDDIAYYGFLNMLDEVLLPSMS
VLANNCCLSEELWSFLKLYPYELRYRLYGNWKNDTYSQHSKLICIRADCLEKAKYIMKRL
SKENVKPSGRQLGKLSHSNPGVLFEYVLSQIQRYDNFIGPVVDSLKYLTSLSYDVLAYCI
IEAVANPDRDRMKHDDTNISLWLQSLANFAGSICRKYTVELAGLMQYVANQLKAGKSFDL
LILREIVQKMAGVEMSEEITNDQLEAMSGGELLRQEGGYFTQVRNTKKSSTRLKDTLLEH
DLALSLCLLMAQQRDGVIFHESAAGHLKLVGKLYDQCQDTLVQFGSFLSMQLSTEEFVKR
LPSVDTLIMSYNVPADAAFFLCRTQYAYAINLKYDELRKIDKANKQTSSQQKTQRYIEAS
EGVMEPVINSIRPVYNAKVWDDLSPYFFVTFWSLSVYDLAVPTSVYEKQKNSLDSQINTI
EDNKDLPQSKKKKEKERCTTLLEKLKDEEKKQSEHVQRVHSRLKAQKEQWFISRSTKNET
ITQFLQLCIFPRCCFTASDAVYCAKFIHILHDLKTPNFSTLICYDRIFCDITFTVTSCTE
NEAHRYGRFLCAALDTIMRWHSERKIYEKECASYPGFVTVFRKGADSVNKADQLDFENYR
HVCHKWHFRITKAMVACLESGNYIQIRNALIVLTKILPNYPKITQFGQALERRVDRLRQD
EKEKRPDIYALAMGYSGLLKGKKTTWVAENEFHQKDNKAQAKVQAAKGGMATPTRKAGDE
AKSGKQNEVKLKDNKDSKDPKEKKVNEKKEVKTDVKVKTEKKNDDKKELVNGTSKEKDSS
KEKVEKKEKLKEEKKEKNKEEKKEKNRDKEEKKNKEDKKDKSSKEDKRAKESKHKDVSDT
VVKEERHDSPRETKAKEDHKDRREKERQEKHDKTLKRSYTPDHDHKEPEGREKEVHRVEK
SSSHTHHSPEISKCHSDERDVKRRKLDSPTGSKERRRSQSRDTHKRTPSPVPEVDRHRER
DKERKDRKRQDWEDDVNHEEVKKRKSLEPSSSRSSHSKINGDTEKHLKRRESDSKSEVHL
VKKEPVDSADESPTRKFKSECQVVKIKKEPHEATDDSPPRSKSRSTQESKVVKVKKDRDS
VEESPTRVKTKEKSKKSDKERSRDKSSSSSKKSKK
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatggtgctagccgacgttaactcaaaatcatgggataaatcagtaaaacat
gacttcttgaaacaatgtaaatcatttgtaaatgacaacaaattatggactccaggacca
aagtcacttaagcaagctttctatgacttgtgttcagttgtatccaaaggccatgtcaaa
caagaacaagcagtatcagttataacagatctatgtgattacaagaaagaggttccatta
ttacttgttgatgtcttttctatatttgatatagagacaacatgttctgaggataaacaa
gaaagagacagatttatttctttggtatcagctgtagagggattaatagcaccaacagtg
tttaaagaacggctggattttgacacattggaaaatgtaggcttaatttcctctagacag
caatatcaagccaaatatgttaaaacaaaaacgagattattttacaaacagatgaaattt
aatttgctacgagaagaaaatgaagggtatgccaaactggtagtagagttaaaccaggaa
ataacagaaaaaatcacacctttacaagttatagaaaatcttaaatcattgataggatgt
tttgaccttgacccaaatcgtgtgttggatatattgttggagtcatttgagaatcgacca
gaacatgatcagttttacatcccaatgtttagagaatatgtcagtgagcctaagacactg
tgtaatatcatgggatttaaatttaaattttatgcttcagaagaaactccacagtctctg
tataaaatggcagctgttttattagaaaatggattggttgatttagacttgctttatcca
catctttcaccagcagacagtaagatttgggaatttcatgagaaagatgtaaacaacgcc
aaagctcatgccaggaagcttaacattgtatcattagctgataaaacggaagataaaaag
acagatgaagaggctattatagatgtgcattcaaccaatcagaagttgggattatgtgga
gagttgctacagtttggatgttggagtagtgtgaaacagattctagacagattaccagag
ttttttgcaacatcatatagacctgttactatgaagctgtgtgaaactgtccataagatg
atggaatctttttatagggagaattgtggcattcctaagaagatattaaaagggaagata
aaacaagacaagaaggttccacaagtgaattcttaccgagagttgcacctacaagtgttt
tctattttacgttatctgggcccatacacagcatatgatccagttcttattgccaagata
ataagacttggaaaaacatttatgtccaagaggcaggatggaggcattacaccagaagat
gatatagcttactatggcttcctcaacatgttggatgaagtactcctacctagtatgtcc
gtgctggccaataattgttgtttgtccgaggagttatggtcatttctcaaattatatcca
tatgaactcaggtatagattgtatgggaactggaagaatgatacatacagtcagcattct
aagttgatctgtatccgagctgattgtctggagaaagctaaatacatcatgaaacgtttg
tctaaggagaatgtgaaaccctctggacgacagcttgggaaactgagtcacagtaatcct
ggtgtattgtttgaatatgtattatcacagatccaaagatatgacaactttattggacct
gttgttgactcactgaagtacctcacatcactatcatatgatgtgttagcttattgtatc
attgaagctgtagcaaacccagacagggataggatgaagcacgatgacacaaacatatcg
ctatggttacaaagtcttgccaactttgctggttctatatgtaggaagtacacagtagaa
ttagctggacttatgcagtatgtagcaaatcaactaaaagctggtaaaagttttgaccta
ctgatattgagggaaattgtacaaaagatggcaggtgtggagatgtctgaggaaataact
aatgatcaactagaggcaatgtcaggaggagaattgttaagacaagagggaggttacttt
actcaagttagaaatacaaagaaatcttctactcggttaaaggatactttactggagcat
gatctggccttgtcactttgtctgttgatggcacaacaacgtgatggtgttatattccat
gagagtgctgctggtcatcttaaacttgtgggaaaactctatgatcagtgtcaggacaca
ttggtacagttcggtagcttcctgtccatgcagctgagcacagaagaatttgttaaacgc
cttccaagtgtagatacactgatcatgagttacaatgtgccagctgatgcagcattcttt
ctttgtagaacacagtatgcttatgcaataaatttgaagtatgatgaactgaggaagatt
gacaaagctaacaaacagacctccagtcagcaaaagacacagcggtatatagaagcatca
gaaggtgttatggaaccagtgatcaactcaatacgtcctgtatataatgctaaagtatgg
gatgatctcagcccttacttctttgtgacattctggtctttatcagtgtatgacttagct
gtacctaccagtgtgtatgagaaacagaagaacagcctggactcacaaatcaacactatt
gaagataacaaagatctgccacaaagtaaaaagaaaaaagaaaaggaaaggtgtacaact
ttattggagaaattaaaagatgaagaaaagaaacagtctgagcatgttcagagagttcat
tccagattaaaggctcagaaagaacaatggtttatatcacgttccacaaagaatgagacg
attactcagtttctacagctatgtatttttccacgctgttgttttactgccagtgatgca
gtatactgcgccaagttcatacatatattacatgatttaaagactccaaacttttctaca
ctcatctgttatgataggatattctgtgatattacttttactgtgacaagctgtactgag
aatgaagctcatcggtatggtagatttctgtgtgctgcattagacacaataatgagatgg
catagtgaaaggaaaatttatgaaaaggagtgtgccagttacccaggatttgtaacagtg
ttcagaaaaggggctgacagtgtaaataaagctgatcagttagactttgaaaattatcgc
catgtttgtcacaaatggcatttcagaattacaaaagctatggtagcatgtcttgaaagt
gggaactatatacaaatacgcaatgcattgatagtactcaccaagatattaccaaattat
cctaagatcacacagtttggtcaggctttggaaaggagggtagatagactaagacaagat
gagaaagagaaaagacctgatatctatgccttagctatggggtattcaggtctgttgaaa
ggaaagaaaacaacatgggtggcagaaaatgagtttcatcaaaaagataataaagctcaa
gccaaagttcaggcagctaaaggtgggatggctacacctaccaggaaagcaggggatgag
gctaaatcaggcaaacaaaatgaagtcaagttaaaagataacaaagattctaaagatcca
aaggaaaaaaaagtgaatgagaaaaaggaggtgaagactgatgtaaaagttaaaacagag
aaaaagaatgatgacaagaaggaactagttaacggaacatccaaggaaaaagatagcagc
aaagagaaagtagaaaagaaagaaaaacttaaagaggagaaaaaagagaaaaataaggaa
gaaaagaaagaaaagaatagagacaaagaagagaaaaagaacaaagaggacaagaaagat
aagtccagtaaggaagataaaagagcaaaggaaagtaagcacaaagatgtatcagataca
gttgtaaaagaagagagacatgattctccaagagaaactaaggcaaaagaagaccataaa
gatagaagagagaaggagcgccaagaaaaacatgacaagactttaaagagatcctacaca
ccagaccatgatcacaaggagccagaaggaagggagaaggaagtacacagggtggagaag
tcatcaagccatacacatcatagtccagagataagcaaatgtcattctgatgaaagagat
gtaaaaagacgcaaactggattctccaactgggtcaaaggagaggaggagaagccagtct
agagacacacataaaaggactccatcaccagttccagaagttgacagacacagagaacgt
gataaagaaagaaaagacagaaaaagacaggattgggaagatgatgttaatcatgaggag
gtaaagaaaagaaaaagtcttgaaccatcatcaagtcgttctagtcacagtaaaataaat
ggtgatacagaaaaacatctaaagagaagagagagtgactctaaatctgaggttcatctg
gttaagaaggaaccagtcgactcagctgatgaatccccaacaagaaagttcaagtctgaa
tgtcaagttgttaaaataaaaaaggaaccacatgaagctacagatgattcacctccaagg
tcaaaatcaaggtcaacccaggagagcaaagttgtcaaagtgaaaaaggacagagatagt
gtagaagaatctcccactagagttaagacaaaagaaaaatcaaagaagagtgacaaagaa
agaagtcgggataaatcatcaagttcatccaagaagagtaaaaagtga
DBGET
integrated database retrieval system
