Mytilus californianus (California mussel): 127717522
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Entry
127717522 CDS
T08804
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127717522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcaf04131
]
127717522
Membrane trafficking [BR:
mcaf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127717522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
zf-RING_Vps41
Clathrin
TPR_VPS8_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
zf_RING_Vps8_fungal
Beta-prop_THOC3
Beta-prop_WDR5
WDR55
Beta-prop_WDR3_1st
zf-RING_5
ANAPC4_WD40
WD40_Prp19
Beta-prop_EML_2
zf-C3HC4
Prok-RING_1
PHD
Beta-prop_HPS5
zf-RING_11
zf-RING_UBOX
B-prop_COPA_B_2nd
EIF3I
zf-RING_2
PHD_NSD
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
127717522
NCBI-ProteinID:
XP_052079162
LinkDB
All DBs
Position
Unknown
AA seq
1389 aa
AA seq
DB search
MESEGSEKSSPSAPISFDIEFDDSEFQADLPQVENPTLESILNEQEEDESLLEEDDVSVP
SSVQLFKDAGDTSSLSSQDSLLSDRPRKRDKLRKSIHYKIHGSVLKPSKLKSISAQLLSA
ADRVDAGMPTAIVVSSLIAIGTSHGLVLVFDPKQVLKWCLGSTAVGTQYGSVSALGFNKD
CTRLLCGFAKGQITMWDLTTGKLLRTIADAHPPGTAVLHIKFTDSLVIAACSDSGGSVFE
LEFKRLIGVRTCESKCLFSGSRGEVCVIEPLHMNVTIKDHPMQDVQLVAMASLSKILLVI
IRPQLKVIFTHSLKGSPGTLPLLAWQFVVIQVSEKDRVIDPVLAFARESTIYFYQVICQN
AQEIKCTGLQKIQLQYNLLNITWMNPRTLVAMDTKEKIHVLDVRSEEELEVIDVSEVMLV
YNTSHFKSLATGGNVSQALAFAGEKACYQTIVSHNGQLFILGTKTVHLYTLRSWRERIDV
LAKQNKYQDALALALSFYEGNAKAVVGLTGSSAKRKQIVADLMLDMLFDYVDLSMTTLCP
EKGKMEELEEYYMTIVPVCVDHCLYLNRTDILFGRIYERFSEDMIAMGTFLECLEPYILG
DKLMSIPPSVMKDFVDHYQSREMLESVEACIVHLEVTSLDIHQVVSLCWSHGLYDAIIYV
YNQGMRDFTTPLEELLTVLRSAVDTGKQLTDNQIRLGNKLLVYISCCLAGRAYPLGDIPE
DHVSDVKNNMFHCITSLHSKNHTSEEPIYPHLRTLLQFDTREFLNVLALAFEEEEFNTEE
GIKKRQRVVDILLQVMVENVGFTPTQVGILFTFLARQMARHENTIQVKKVLFEQVLEFLS
NPDDESRHEERQQALMELLRAGGLIQIDEERLLYLVENAKFYRVCEMLYEKRRQYDKILS
CYLRDYARKYHAFSYITSILNSDRYSSMEKEALKEEALRNLQELVSIDCKQAAQMVIGCF
ASNLGDICKQLEDTPQILFEFLQGVMSCKDTGSSAIHQDRGINIEPQVFELYIDLMCQFK
PNEVLNYIKMNEGYRLEQTLQICRKYKLSEATAFLLEKAGDIQGAFGIILQKLQAKLKLF
VEVMQGGNTEKDVNVLFLEIHTLAIVIIQLCQRNSGKMDEASREALWFPLLETVMTPQRK
LKDIDNKDVLDDFNKLTHHILNSMMGYIALPAILQKIMQDPAYNTGKFGEVRELILGMLE
TYNYEQTLMKTCKNLLNHDIHVHLKSLTSAAVRGYIPRGDNCNLCNKLFINQNETDSVVV
FRCGHSYHLPCLRSVGSVHVMDGEEMWACYLCSHSKRGRIQSTRFHRSLSNPNQAALQTP
KEKSKEMTLDSQHIQAIDAVRKAMKTPSRMAILTELSRSDTRSVRGSSGIFHQENFQLRL
APPIAPTNS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgaaggctcagaaaaatctagtccttctgcaccaataagttttgatattgag
tttgatgattctgagtttcaagcagatctacctcaagttgaaaatccaacattagaaagc
atattaaatgagcaagaagaggatgaatcgctattagaagaagatgatgtttctgtcccc
tcctctgttcagctgtttaaagatgctggggatacatcttctttatcaagtcaagacagt
ttgttatcagatagacccagaaaacgggataagttgagaaagagtatacattataagatc
catggttctgtactgaagcccagtaaactgaagagtatttcagctcaactgttatcggca
gctgatagagtagatgctggtatgccaacagccattgttgtatcctcactaattgccata
ggaacatcacatggtttagtattggtttttgaccccaaacaagtattgaagtggtgtcta
ggtagtacagctgtgggaactcagtatgggtctgtgtcagctctcggttttaacaaagat
tgtaccaggcttttgtgtgggtttgcaaaagggcagattacaatgtgggatctgactacc
ggcaagttgttaagaacaatagcagacgctcatcctcctggaactgcagtacttcatata
aagtttacagatagtttagtgatagctgcgtgtagtgacagtggtggatcagtgtttgaa
ctggaatttaaacgtcttattggtgtcagaacatgtgaatctaagtgtctattttctgga
agtcggggtgaagtctgtgttatagaaccacttcatatgaatgttacaattaaagatcat
cctatgcaagatgtacagttggtggccatggcttctttatccaagatcctgttggtgatt
attcgtcctcagctgaaggtcatcttcactcactcattaaagggcagtcccggaacatta
ccattactagcctggcagtttgttgtgatccaggtatcggagaaagatcgagtcattgat
ccagtcttggcttttgcaagagaatctaccatatacttttatcaggtgatttgtcagaat
gcacaggaaattaagtgtactggtttacagaaaatacagctacagtataatttactcaac
ataacttggatgaatccaagaacacttgttgccatggataccaaagaaaaaatacatgtt
ctagatgttagatcagaagaggagttagaggtgattgatgtatcagaagttatgttggtt
tacaacacgagtcatttcaaatctttagccactggtggcaatgtcagtcaagccttggcc
tttgctggagagaaggcttgttaccagaccattgtcagccataatgggcaattgttcata
ctgggaactaaaacagttcatctatatacactgaggtcatggagagagagaatagatgtg
ctagctaaacagaataaataccaagatgctctagcattggctctgtcattctatgagggc
aatgctaaagcagttgttggactgactggttcatctgctaaaaggaaacagattgtggct
gatctgatgttggacatgttgtttgactatgttgacctttctatgacaactttatgtcca
gagaaaggcaagatggaagaattggaggagtattatatgacaatagtaccagtttgtgta
gaccattgcctgtatctaaacagaactgatattctgtttgggagaatctatgaaagattt
agtgaagatatgattgctatgggaacgttcttagaatgtctggagccatatatcctggga
gacaagctcatgtccattcctccatctgttatgaaggattttgtagaccattatcagagc
cgtgaaatgttagagagtgtagaggcctgtatagttcatctagaggtcactagcttagat
attcatcaggttgtatctttatgctggagccatggtctatatgatgctataatttatgtg
tacaaccaagggatgagagattttaccacaccattggaagaattgcttactgttctgagg
tctgctgttgatactgggaaacagctcacagataatcagataagactaggaaataaactt
ctggtgtatataagttgttgtttagcaggaagagcctacccattaggagatattcccgaa
gatcatgtatctgatgtcaaaaacaatatgtttcattgcataacaagtttacattccaag
aatcacacttcagaagaacccatctatcctcatttgagaacattattacagtttgacaca
agagagtttttaaacgtgttagctttggcttttgaagaagaggagttcaacacagaggaa
ggaataaagaaaagacaaagagttgtagatatattactacaggtgatggtagaaaatgtt
ggttttactcctacccaagttggaattttgttcacctttcttgcacgacaaatggccaga
catgagaataccatccaagtcaagaaagtattgtttgaacaggtgcttgagttcctttct
aacccagatgatgaatctagacatgaagaaagacagcaggccttaatggaattattgaga
gcaggtggactaatccagatagatgaagaaagactattgtaccttgtagaaaatgctaaa
ttctaccgtgtatgtgaaatgttatatgagaagagaaggcaatatgataaaattttatcc
tgctatcttagagattacgctaggaagtaccatgctttcagttatataaccagtatatta
aacagtgacagatattcctccatggaaaaagaggctcttaaggaggaagctttgagaaat
ctacaggaattggtttccatagattgtaaacaagcagctcagatggtgattgggtgtttt
gccagtaaccttggtgacatctgtaaacagttagaggacacacctcagatattgtttgag
tttttacagggtgtcatgtcatgcaaggatacaggtagtagtgctatccaccaagatcgt
ggcatcaacatagaaccacaggtgtttgagttgtacatagatttaatgtgtcagtttaaa
cccaatgaagtcctcaactacatcaagatgaatgaaggttacagactagaacaaacatta
cagatatgcagaaaatataaactttctgaagccactgcttttctattggagaaagctggg
gacatacagggagcttttggtattatattacagaaattacaggctaagttgaaattgttt
gttgaagtcatgcaaggtggtaatacggaaaaagatgtaaatgttttattcttggagatc
catactcttgctatagtcatcatacaactttgtcagaggaattctgggaaaatggatgaa
gccagcagggaggcactatggtttccactgttagagacagttatgaccccacagagaaag
ttaaaggatattgacaacaaagatgtactagatgattttaataaactgactcatcacata
cttaacagcatgatgggttatatagccttaccagctattctgcagaaaataatgcaagac
ccagcatacaacacagggaaatttggtgaagtgagagaactcatattaggcatgttggaa
acttataactatgaacagactttgatgaaaacatgtaaaaatttactgaaccatgacata
catgtccatttgaagagtttaactagtgctgcggtcagaggatatattccaaggggagat
aactgtaatctgtgtaataaactgtttattaatcagaatgaaacagattctgtagttgtg
ttcagatgtggccacagctaccatctaccatgtttgagatctgtaggatcagtccatgtg
atggatggggaagaaatgtgggcgtgttacttatgcagtcattcaaaaagagggcgtatc
cagagtacgaggttccataggtcattatctaatcctaatcaggcagcactacaaacacct
aaagaaaaatctaaagagatgacacttgattcacaacatattcaagctattgatgctgtt
aggaaagccatgaaaacaccatccagaatggccatactgacagaactatccagatcagac
acccgttcagtaagaggctcatcagggatatttcaccaagaaaactttcagctcagactt
gcacctcccattgcccctaccaactcttga
DBGET
integrated database retrieval system
