Mytilus californianus (California mussel): 127717674
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Entry
127717674 CDS
T08804
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127717674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127717674
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127717674
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127717674
Coactivators
SAGA/TFTC/STAGA complex
127717674
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
127717674
STAGA complex
127717674
TFTC complex
127717674
SAGA complex
127717674
SLIK complex
127717674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_IFT140_1st
eIF2A
PEP5_VPS11_N
WD_LRWD1
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WDR54
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
RMC1_N
Beta-prop_NOL10_N
SLATT_fungal
LisH_TPL
Beta-prop_WDR11_2nd
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
127717674
NCBI-ProteinID:
XP_052079378
LinkDB
All DBs
Position
Unknown
AA seq
661 aa
AA seq
DB search
MNSLQSQSSPKSDVSDKQTLLAVLQFLKKNNLKCTEELLKKEAGVTDDDVKPQSVGQSES
DVANALAAYKSSDDPTRYTDYYTDLKTFIESCLDVHKVELYLILYPVFVHMYLELVYNQH
ERHAMEFFHKFSGEQEYYYQDDLKQLSSVTKREHMRGNQLMDNFKASRFIIKMSRDSYNH
LKRYLQENQMKPLLTIIQEHLFIDVFDGVPRNKQQITATGGGLLGEAERDANKAKVFYGL
LKEPDINIPVDDDDEAPEGEDKPKKKKAKKDPLLMRKSKNDPHAPQSNRIPLPELKDQDK
LEKINSFREAIKRVRIGADQMPTVCFYSITNAHQGVTTVNVCEDSSLMSAGFADSTIRVF
TLTPSKLRGMKSGDDLEIIDKDSDDVLERMMDDRSSSEVKSLVGHSGPVYATDISHDKKF
LISSSEDGSVRLWSLLTWSNLVCYKGHQYPVWDAKFSPHGHYFVSCGHDRTARLWSTDHY
QPLRIYAGHLSDVDCVEFHPNSNYIVTGSSDRVVRMWDNQSGNCVRTFTGHKGPIHKMCF
SPDGRFIATGGVDKTILLWDIASGNMLAQLKGHTQAVYSLTFSREGSVLSSGGLDSCVKI
WDVNRVLQEYDTDSDATIPSSLQVNDNANLLLGSFPTKQTSVLCVHFTRKNLLLASGPVA
I
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtttacagtcacagtcttctcccaaatcggacgtttcagacaaacagacactg
ttagctgtcttacaatttctgaagaagaacaacttaaagtgtacagaagaattgttgaag
aaagaggctggggtaacagatgatgatgttaaaccacaaagtgttggacaaagtgaaagt
gatgtagccaatgcattggctgcttataaaagttcagatgatcctactcggtacactgat
tactacacagatctgaaaacatttatagagtcatgtcttgatgtacataaggttgaactg
tatttgatattgtatcctgtgtttgtccatatgtacttagaacttgtatacaaccaacat
gaaagacatgctatggaattcttccacaagttttcaggagaacaagaatattattaccaa
gatgacttaaaacaattatcatctgtcaccaaaagagaacacatgagaggcaatcaactc
atggataattttaaggccagcagatttataataaaaatgtcacgtgattcctataatcat
ctgaagagatatctgcaggaaaatcaaatgaaaccattactgactatcattcaggaacat
ttatttattgacgtttttgatggagttcccagaaataaacaacagataacagcaactggt
ggtggattgctaggagaggcagagagagatgcaaataaagccaaagtattctatggttta
ctgaaggagcctgatatcaatatacctgtggatgatgatgatgaggcacctgaaggcgag
gataaacctaagaaaaaaaaagccaagaaagatccacttttaatgaggaaatccaaaaat
gatccacatgccccacaaagcaataggataccattaccagagctgaaagaccaagataag
ttggagaaaataaattcttttcgtgaagctattaagcgagtgagaataggagcagatcag
atgcctacagtttgtttttattccattacaaatgctcaccaaggagtaaccacagtgaat
gtttgtgaagattccagcctgatgtctgctggatttgctgattctaccattcgagtgttt
actctgacacctagtaaacttcgaggaatgaaatctggggatgacttggaaattattgac
aaagattcagatgatgtgctagaaagaatgatggatgatagatcaagttcagaggtgaag
tcattagtaggtcacagtggcccagtttatgctacagatattagtcatgacaaaaaattt
cttatttcatcttcagaggatggaagtgtacgattatggagtctacttacatggagtaat
ttagtgtgctacaaaggtcaccagtacccagtctgggatgctaaattcagccctcatggt
cattattttgtatcctgtggacatgatagaacagccagattgtggtcaacagatcattat
caaccattgaggatatatgctggtcatctatcagatgttgactgtgtagaatttcaccca
aacagcaactacattgtaacaggttccagtgatcgtgtggttagaatgtgggacaatcaa
tctggaaactgtgtcagaactttcacaggacataaggggccaatacacaagatgtgcttt
tctcctgatggtagatttatagctacaggtggtgttgataagacaattttattgtgggat
attgcaagtggtaatatgttagcacagttaaaaggccacacacaggctgtctattctctt
acattcagtcgggaaggaagtgttttatcatcaggaggtctagacagttgtgtgaagatc
tgggatgtcaatagagtattacaggaatatgatacagattctgatgccacaataccaagt
tcattacaggtgaatgataatgctaatttgttactaggatccttcccaacaaaacagaca
tcagttttatgtgttcactttacaaggaagaaccttttattagcaagtggacctgtcgcc
atatga
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integrated database retrieval system
