Mytilus californianus (California mussel): 127718005
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Entry
127718005 CDS
T08804
Name
(RefSeq) probable nuclear hormone receptor HR38
KO
K04465
nuclear receptor subfamily 4 group A member 1
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcaf03000
]
127718005
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcaf03310
]
127718005
Transcription factors [BR:
mcaf03000
]
Eukaryotic type
Zinc finger
Cys4 nerve growth factor IB-like
127718005
Nuclear receptors [BR:
mcaf03310
]
4. Nerve growth factor IB like
4A. Nerve growth factor IB like receptor
127718005
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127718005
NCBI-ProteinID:
XP_052079861
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MLLLQPQAAFTSQASFLGDLPAPFASCGTQSGSADIGIFPSSSGFQGTMPSDTSYTSEDI
PSDIFQGGFDSSAFQNIQQGYPETYSYEGAFMVDKESAKQLGAMYSTENQSFPGSQPKYS
DSMMSYEGSFQAFPAQDCDLLPQRYISDTKQKFTYPSPHELFQSPHIGYSEIDQKHPPFS
SHQSFSDASNIFCRDRSSFPSYGPGFYDNRSLPHTETDRTHYRPGDLNVVRQGFSRRPPL
TIPMPPGTPEGMDVQKFHIKSPATPSTPSSTRSSPGREQPQKESLLCAVCGDNAACQHYG
VRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTD
SLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDSSPDIPNLDYSKFEVPSGSTSPT
SHEEKIRLFYDIILTSMDILKAWAEKIPGFCDLCKEDQDLLFKSASLELFVLRIAYRVHP
NDDQIIFDNGQVFHRDEIRSIFGEWIDSIVDFGLSLHRNNLDISSLACMAALTLVTTRHG
VKDQKKMEDLQMKIIDCLRDHCTYNSEAQKKPHLFSYILSTEAELRTLSREGLQRMLFFK
LEDIFQAPPIIEDTYLSSALPF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgttacttctacagcctcaggctgccttcacttctcaagccagttttctgggagatttg
ccggcaccgtttgcttcgtgcggcacacagtctggtagtgcggacatcggaatatttcca
tcatcttcaggatttcaaggaacaatgccttcggatacatcatacacgtcagaagatatt
ccttccgacatttttcagggcggctttgactcatctgcttttcaaaacatacaacaaggc
tatccagaaacctacagttacgaaggagcattcatggtggacaaagagtcagctaaacag
ctgggagctatgtattcaacggaaaatcaaagtttcccaggatcacaaccaaagtattcc
gactccatgatgtcttatgaaggcagttttcaagcatttccggcacaggattgtgactta
ttaccacaaagatacatcagtgacactaaacaaaaattcacttatccatcacctcatgaa
ctcttccaatcacctcatattggatattccgaaatcgatcaaaaacatccgccattcagt
tctcatcaaagttttagtgatgcttcaaacattttttgcagagacagaagcagttttcct
agttacggtccgggtttttatgacaaccgaagtttacctcacacggagactgacaggact
cattatcgtcctggagatttaaatgttgttcgtcaaggtttctcccgtagaccgcctctg
acgattcccatgcctcctggtactccagaaggaatggatgtacagaaatttcatatcaaa
tccccagcaaccccttccacgccgagttccacaaggtcttcccctgggagggaacaacca
cagaaagagagtctattgtgtgcagtttgtggcgacaacgctgcttgtcagcattatgga
gtaagaacatgtgaaggatgcaagggatttttcaagaggacagtacagaaaaacgccaag
tacgtgtgtctggccgataaaaattgtccagtggataagagaaggcgaaacaggtgccag
ttttgccgattccaaaaatgtctggttgttggcatggtgaaagaagttgtaagaacagac
agtttaaagggcagacgtggtcggcttccatcaaagccaaaaagtccacaagaatcacca
ccttcacccccagtcagcctcattactgctttggtccgagcacatgtagactcttcccca
gacattccaaatctggactacagtaagtttgaagtgccttcaggttcaacaagcccaacc
tcacatgaagaaaaaatcaggcttttctatgatattatccttacctccatggatatactt
aaagcatgggcagaaaaaattcctggcttctgtgacctgtgcaaagaagatcaagatctc
cttttcaaatcagcatcattagaactctttgttttgcggatagcttacagagtgcatcct
aatgatgatcagataatttttgacaatggccaggtattccacagagacgagatcagaagt
atatttggagaatggattgattccatagtagactttggactgtctctccacagaaacaat
ctagacatctcatcacttgcttgtatggcagctcttactctagtcacaacacggcatgga
gtcaaagatcaaaagaaaatggaagatttacaaatgaaaattatagactgtttgcgtgat
cattgtacctacaacagtgaagcacagaaaaagccacatttattttcctatattcttagt
acagaagcagaacttagaacattaagccgagaagggctccaacgaatgttgttttttaaa
ctcgaagacatttttcaggccccacctatcattgaagatacttacttatcaagtgcacta
ccattttaa
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