Mytilus californianus (California mussel): 127718052
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Entry
127718052 CDS
T08804
Name
(RefSeq) retinoic acid receptor alpha-A-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcaf03000
]
127718052
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcaf03310
]
127718052
Transcription factors [BR:
mcaf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127718052
Nuclear receptors [BR:
mcaf03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
127718052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Phage_T4_Y00F
DUF8783
PBECR1
Motif
Other DBs
NCBI-GeneID:
127718052
NCBI-ProteinID:
XP_052079910
LinkDB
All DBs
Position
Unknown
AA seq
467 aa
AA seq
DB search
MLVLNMNHSMGQDQNMTHEQTLLQTLSLSHAPINADHSPYSLEPQNGSYVGSHSAYEHYL
FAQKSGYMLPSNQQLKSPMFDTQGMYEMQSPATMSDPSMSPSPPPPPRIYKPCVVCSDKS
SGYHYGVSSCEGCKGFFRRSVQKNMQYTCHKDKNCVINKVTRNRCQYCRLQKCFATGMSK
EGMEERAVRNDRNKKKVKRPEECTQSEELTEDEQLMLQEILDAHNDTFHKQSETTLSRVP
KIKTNGVDAEKAENKEEEEKGKIEKIMLWEKVTELSSKGIIKIVEFAKRVPGFATLSTSD
QITLLKAACLEIMILRLSSRYDVDKDVLSFNDGITLDRQQLRNGGFGSLTDTIFSFASSL
KSMETDSLEYAALSAVCLVSNDRSGLEDPVKIEHLQEPILEALKHYIRQRRKESPHVFAK
MIMKLTDLRSISVKGAERVLHLRLEMPDELPPLIIEMLDRTENVCIP
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgttagtgttaaacatgaatcacagtatgggtcaggatcaaaatatgacccatgagcag
accctgcttcagaccctgagcttaagtcatgcacccatcaatgcagatcactcaccatac
agcttagaacctcagaatggcagctatgtcggatctcactcagcttatgaacattattta
tttgctcaaaagtctggttacatgttacctagcaaccagcaactcaaaagtccaatgttt
gacactcagggaatgtatgagatgcagagtccagcgaccatgtccgacccaagcatgtcc
ccatcacctcctcccccacccagaatctacaagccatgtgttgtatgcagtgataagtca
tcaggctatcattatggagttagttcctgtgaaggatgcaagggcttttttagaagaagt
gttcagaaaaatatgcaatatacctgccataaagacaaaaactgtgttataaataaagtt
acaagaaataggtgccagtattgtcgactacaaaaatgttttgccacagggatgtcgaaa
gaaggtatggaagaacgagctgtaagaaatgacagaaacaagaagaaagtgaagcgacca
gaagaatgtacccagtctgaagagctgacggaggatgaacagctgatgttacaggagatc
ctggatgcccataatgacacattccataaacagtcagagacaacgctgtcaagggtacct
aaaatcaagacaaatggtgtggacgctgaaaaagcggaaaacaaagaagaagaagagaaa
gggaagatagaaaagattatgttatgggaaaaagtaacagaactgtcttcgaaaggaatt
ataaaaattgtagaatttgctaaaagggtaccaggttttgcaacgttatctacctcagat
caaatcacgttacttaaggcagcttgtctggaaatcatgatattacggcttagttctaga
tatgatgttgacaaagatgttttgtcttttaacgatggaataacattagatcgtcaacag
ttacgtaatggcggattcggttcgctcactgacactatattttcatttgcatcttccctc
aaatccatggaaacagatagtttagaatatgcagctctgtctgctgtgtgtttagttagt
aatgatcgctcaggtttagaagatccagtaaaaatagaacatttacaagaacctatatta
gaagcattaaaacattatatccgacaacggcggaaagaatcgcctcatgtgtttgctaaa
atgataatgaaattaactgatctcaggtctataagtgtgaaaggtgctgaaagagtatta
catttacgattggaaatgcctgatgaattaccgccattaataatagaaatgttggataga
acagaaaatgtttgtataccatga
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