Mytilus californianus (California mussel): 127719322
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Entry
127719322 CDS
T08804
Name
(RefSeq) ubiquitin conjugation factor E4 B-like isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04120
Ubiquitin mediated proteolysis
mcaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127719322
04120 Ubiquitin mediated proteolysis
127719322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127719322
Enzymes [BR:
mcaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127719322
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
U-box type E3
127719322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
MtlR
Motif
Other DBs
NCBI-GeneID:
127719322
NCBI-ProteinID:
XP_052081338
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MSELTPDEIRRRRLARLAGNQTTPPDGDRSTGTQSTPSSQSSERQSSQSTPSQSSVDTTQ
RRTLPSTLSVDPITPDSQRSMEVDSECSEKQFQSQMDVDSGIETMEVDETETKYDVKRRR
EVGAEANEEQMLSAIRSIFLVSWKESSSDTLHLPQLSDSVDQGCIDYKDLVNETVMEVLL
KIRESSDNPILKLRTVSPRKPGSSPKTSLAPSLQLRREFKYEPEKCKDTDLINYLLDSYD
RVAIEERTAPKRASMPPMSTMLSSARNQCVCHTAMVLQGVFTRPRSGMSLLLPYLLSHNL
PRGFLPELVQTICPDRDTFCKIFEPVLHSLTRMIHPLSLDSDEYKDPLCVLTELCEIKSG
NTRPVCSLIVKQSNWLPDSLTQAAGIELEKLSVLGPFLGLSLFAEDNTRVVEKYFSGHQL
TPDNIRITQQSLQHGLEFVRNELYKITHNILVNSDSRDAALSFIATSLERNSKKSQIQVD
ERYVAGDGFMLNLLSVLQMLTVNKISLEKVDPYYPFHPNSRVSIKSETRLRALPNDCDKW
TEKLKSEKKPPWQDPKFPTECFFVTLHCHHLSIVPATRRYQQRLKAIRDVSRMVDELENT
EPIWSKLPNAARNKELLKKWKSQVQRLNKSKLCADAAVLDESLLRRCLQFYEVHSDYMLK
VADPKSSGVTLPLPTDVPMQFAALPDFYIEDLAEFLQFILQYVPHVADDPSMDRILHLLV
VLVCSSNYIGNPYLIAKLVEVIFVMNPAVQPRSQSLNEKFLMHPLALQHLVPALMNFYTD
IESTGASSEFYDKFAIRYHLSIILKVMWTIPAHQNRMIEEAKKGKSFVKFVNMLMNDTTF
LLDESLDCLKRIHEIQEALENTEEWEKQSREQQQSRQRQLAMDEKQCRSYLTLATETVDM
FHYLTQKIIGPFLDSHLGDRLAAMLNFNLQQLCGSKCKNLKVKNPEKYGWEPKKLLDSLT
DIYLHLDCDAFANTIANDERSYKKELFDDAIGRMRRARIKTEQEIDKFRKLQDKVEDLVR
DKNLAETDYGEIPEEFKDPLMDTLLDDPVILPSGTVMEKSIIMRHLLNSQTDPFNRQPLT
EDELKPATDLKKKIQQWKIEKRKSKR
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaactcactccagacgagataagaagaagacgtctggccaggttagcaggaaac
cagactacccctccagatggagacaggtcaacaggaacccagtctacaccttctagtcag
tcttcagaaagacaatcaagtcagtcaacaccaagtcaatcatcagtagatactacacaa
aggcgaactcttccaagtactttaagtgtagacccaatcacaccagactcacagagaagt
atggaagtggattcagaatgctcagaaaaacaattccagtctcagatggatgttgattct
ggaatagaaaccatggaagttgatgaaacagagactaaatatgatgtgaagcgtcgacgg
gaggtcggtgctgaagctaatgaagaacaaatgttaagtgcaataaggtcgatattcctg
gtgtcctggaaggaaagttcatctgatacgcttcatttaccacaactgagcgactcagtt
gaccaaggttgtatagattataaagatttggtaaatgagacagtaatggaagttttgttg
aagataagagaaagctctgataatcctatcctgaaacttagaactgtatcaccaaggaaa
ccaggctccagtccaaaaacatctttagcccccagtttacaattacgacgagaatttaag
tatgaaccagagaaatgtaaggatacagatttgataaactatttactggacagctatgat
agagtggctattgaagaaagaacagctcctaagagagcaagtatgccacctatgagtaca
atgttatcttcagccaggaaccagtgtgtatgtcatacagcaatggttttacaaggagtt
tttactagaccaagatctggaatgtccttattattaccttatttattgtctcacaatctt
cctcgaggatttctaccagaacttgtacagacaatctgtcctgatagagatacattctgt
aagatatttgaaccagttctccacagtttaacacggatgattcatcctctgtctctagac
agtgatgagtataaggaccctctttgtgtgttgacagagttgtgtgaaataaaaagtggc
aatacaaggccagtctgctcactgatagtaaaacagagtaactggttaccagattcttta
acacaagctgcagggatagagttagagaagttgtctgtgttaggaccatttcttggttta
tcattgtttgctgaagataatactagagtggtagagaaatatttttctggccaccagtta
acaccggacaatatcaggattactcaacagtcattacaacatggcttagaatttgtacga
aatgaattatataagataacacataatattctagtcaactctgatagcagagatgcagcc
ttgtctttcatagccacatctttggagagaaactctaaaaagtctcaaatacaggtagat
gagcgatatgttgcaggagacggctttatgttaaatttgttatcagttttacagatgtta
actgttaataaaataagtttagaaaaggtagatccttattatccatttcatcctaattcc
cgtgtcagcattaagtcagaaacacgactccgagctctgcctaatgattgtgacaagtgg
acagaaaaactcaaatctgagaagaagcccccatggcaggatcctaaatttcctacggag
tgcttctttgtgacgttacactgccatcatctgtctattgtgcctgccacacgacgttac
caacaaaggttgaaggccatcagggatgtcagtcgtatggtcgatgaactggagaataca
gaaccaatatggagtaaacttcctaatgctgctagaaataaagaacttctaaagaaatgg
aaatctcaggtccagagactaaataaaagtaaactttgtgctgatgctgctgtgttagat
gaatctctgttacgaagatgcttacaattctatgaagtccattctgattacatgttaaaa
gtagctgatcctaaaagttcaggagtaactctgccacttccaactgacgtacccatgcag
tttgctgctttaccagatttctacatagaagatttagcagaattcttacagttcattctt
caatatgtgccccatgtggcagacgatccctccatggacagaatactacacttgttggta
gtattagtgtgtagcagtaattatattggaaacccttacctgatagccaaactggtagaa
gttatctttgtgatgaaccctgccgtacaacccaggagtcagagtctcaacgagaaattt
ttaatgcatccattagctttacaacacttagttccagctctcatgaacttttatacagat
attgaatcaacaggagctagcagtgaattctatgataaatttgctatacgatatcatctt
agtattattctgaaagtgatgtggacaataccagctcaccagaacagaatgatagaggaa
gccaagaaaggcaaatcatttgtgaagtttgttaatatgttaatgaatgatacaacattt
ttattggatgaaagtttggactgtttaaaacgaattcatgaaattcaagaggcattagaa
aatacagaagaatgggagaaacaatccagggagcagcagcaatcacgacaacgacaacta
gctatggatgaaaaacaatgccgatcatacctcacccttgccacggaaacagttgatatg
ttccattatcttacacagaaaattattggtccttttctggactcgcatttaggtgacaga
ctggcagctatgttaaactttaaccttcaacagctatgtggttcaaagtgtaagaacttg
aaagtgaaaaacccagagaaatatggatgggagcctaaaaaactgctggatagtttaaca
gatatatacctacatttagactgtgatgcttttgctaatactatagctaatgatgagagg
tcctataaaaaggaattgtttgatgatgcaataggtagaatgagaagagccaggattaaa
actgaacaagagattgataaattccgtaaactacaagataaagtggaagatttggtcagg
gacaaaaacttagctgaaacagactatggggaaattcctgaagaattcaaagatccttta
atggacactttactagatgaccctgtgatattacctagtggaacagtcatggaaaagtcc
attataatgaggcatttattaaattcacaaacagacccattcaatagacaacctcttaca
gaggatgaattaaaaccagctacagatctcaagaagaaaattcaacaatggaagattgag
aaaaggaagtcaaaacgttag
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integrated database retrieval system
