KEGG   Mytilus californianus (California mussel): 127721261
Entry
127721261         CDS       T08804                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mcaf  Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcaf03041]
    127721261
Spliceosome [BR:mcaf03041]
 Complex B
  Other components
   Complex B specific factors
    127721261
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_Nup120_160 NBCH_WD40 WDR90_beta-prop_4th LisH_TPL Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Beta-prop_Vps41 Ge1_WD40 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_VPS8 WD40_RFWD3 Beta-prop_IP5PC_F Mala_s_1-like LisH_WDR26 VPS8_N WD40_like zf_topless PD40 Beta-prop_IFT122_2nd FOP_dimer
Other DBs
NCBI-GeneID: 127721261
NCBI-ProteinID: XP_052083897
LinkDB
Position
Unknown
AA seq 513 aa
MAVEIEQRDVVRLIEQYLKENNLLRTLTVLQEESGTSLNTVDSVDGFVSDINSGHWDSVL
QAIQTLKLPDQKLIDLYEQIVLELVELRELGAAKTLLRQTDPMIMMKHNQPDRYIHLENM
LARSYFDPREAYPEGQTKERRRQAIAQALSGEVNVVPPSRLLALLGQSLKWQQHQGLLPP
GTTIDVFRGKAAVKEQEEEKYPTQLSKTIKFGQKAHIECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLRYQAQDNFMMMDDAVLCMCFSRDAEMLATGAQDGKLKVWKILTGQCLR
KIERCHTKGITCVNFSKDNSQILSCSFDQAIRIHGLKSGKLLKEFRGHTSFVNDAVFTQD
NHHILSASSDGTIKVWNLKTTECSNTFKSLGGTAGSDTTVHSVHPLPRNAEQFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDMVLYCFCISTGKLERTL
TVHEKDVIGITHHPHQNLLGTYSEDGLLKIWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggctgtcgaaatcgagcaaagagatgttgttcgtctgattgaacagtacttgaaggaa
aataatttactacggacactaacagttctacaagaagagagcgggacgtcactgaatact
gttgattctgtagatggattcgtctccgacatcaacagtggtcactgggacagtgttctc
caagccatacagacacttaaacttcctgatcaaaaactcatagatttatatgaacagatt
gtattagagttggtagaattacgtgagcttggtgcagcaaagacattacttcgtcagaca
gatcccatgatcatgatgaaacacaaccaaccagacagatacatacatttagaaaacatg
ttggctaggtcatattttgatccaagggaggcatatcctgaaggccagacaaaggaaaga
agaagacaagccatagcccaggccttgtcaggagaagtaaatgttgttccaccatctcgt
ttgttggctttgctgggacagtcattgaaatggcagcaacatcaaggattattacctcca
ggaaccacaatagatgtgttcagaggaaaagctgcggtaaaggaacaagaagaggaaaaa
tatccaacacagctgagcaaaactattaagtttggtcaaaaagctcacattgaatgtgct
agattttctcctgatggtcaatatctggtcactgggtcagtagatggatttatagaagtt
tggaattttactacaggcaaaatcagaaaagatttgagataccaagcacaagataatttt
atgatgatggacgatgctgtattatgtatgtgttttagtagagatgctgaaatgttagcc
acaggagcacaggatggtaaactcaaggtttggaaaattttgacaggacaatgtctacga
aaaatagaacgatgtcacacaaagggaataacatgtgtaaacttctctaaagacaacagt
caaatactgagttgttcatttgaccaggccataagaatccatggtttgaaatctggcaaa
ctgctgaaggagtttagaggtcacacatcatttgtaaacgatgcagtgtttacacaagac
aaccatcacatactgagtgccagttcagatggaacaataaaagtatggaatctcaaaaca
acggaatgttccaacacatttaaatctcttggcggtacagcaggaagtgacaccacggtt
catagtgtacatccgttgccaaggaatgcagaacagtttgtcgtctgcaacagatctaat
acagttgttattatgaatatgcaaggccagattgtaagaagtttttccagtggtaagaga
gaaggaggagattttgtttgttgtacgttatctccaagaggagaatggatctattgtgtt
ggagaagatatggtgttatattgtttctgtattagtacaggcaaactagagagaacttta
actgtacatgaaaaagacgtaataggaataacacatcatccacatcagaatttactgggg
acttactcagaagatggactattaaaaatatggaaaccttga

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