Mytilus californianus (California mussel): 127723518
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Entry
127723518 CDS
T08804
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127723518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127723518
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127723518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
nSTAND_NTPase5
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
127723518
NCBI-ProteinID:
XP_052086117
LinkDB
All DBs
Position
Unknown
AA seq
1350 aa
AA seq
DB search
MGPKPTPSKQGNTLFSYFSKSPSINKSSGSVSDTSEILSPKRSPNLKDKANANSTPKQTA
KSSKSNDELVKEYELGDLLWSKLEGYPWWPSLVCNHPTENTHVKGGKNAQVHVQFFDDPV
SRSWVKVKNVRSYIGSDDKECQKGGTFFSMNMLVRKAGDEADKAMKMNVEDRLKLVVNLL
PSDNEDDEMDFDPDIFDAEMEEGESNNSKENKDIEQSKTTPKKTPKKSPRKGRRSARQPK
LKRRRIIESKNSSDEDSGDEFKPGSDSSGEEDDSSGVDENDVSDIDHESEIDSPVKNENR
KRKRPPPKQKISDTPSSLTPSANRNSFTPSVGDKTKSRLSMFSASDSGPSVTGSSEQEAN
FPHVKLPFLQPGKILDIKGHPESDPDYDPRTVSIPDTFLKQQTPGMRQWWEMKSKYYDTI
LFFKMGKFYELFHMDAVVGVNELGIIYMKGEQAHSGFPEIAYTRYASTLLQKGYKVARIE
QTETPDMMNDRLKTMSRMATKFDKVVRREVCRVTTKGTQTFSFLDGDATEAKSNFLLGIA
EKEDSSEGCSTYGVCFVDTSIGKFHVGQFTDDRYSSRLRTLIAHYTPVQVLLERGKSSQK
TNQLINNNLISVTKEFLAPGSEFWESGKTLKRLAEEDYFSSEDELVWPDTIKKMISDSDS
LGLTAADEYNLAVRALGSVTWYLQFCLLDTDLLTMKNFEEYTPLDDNVIKTRSTIFTGKQ
HMVLDGVTLANLDVTENSSNGTLEGTLLQRLDQCSTPFGRRLLKQWLCAPLCNPESINDR
LNGVEDLMESQDIVAEVVEMMKKIPDLERILNRIHSLGLSKKKNHPDSRAIFFDEAKYSK
KKIEEFLSTLEGFKTSYNIALKFKERVKSFKSKLLQKTLTLVSVQGQNGVFPDLKDEIVF
FENAFDHNKAKKDGVIVPNKGVDPDYDKAKLDIKMTERKFDKYLDEQRDRISCRQMVFWG
SGKNRYQLEIPESALKRVPDEYDLKSSKKGWKRYWTSDIQDMLAELVEAEDRKDVAQRDC
MRRIFESFDERYKIWDTTVQCVAVLDVLVAMAQYSRCGDGIMCRPEVIAIESNREPYIEI
REARHPCVVRTFGGGDFIPNDTIIGIADENDMETDAEDHSSSKVVLVTGPNMGGKSTLMR
QVGLITIIAQMGCYVPAEKCRMTPVDRVFTRLGASDRIMAGESTFFVELSETAAILQHAT
KHSLVLMDELGRGTATYDGTAIACSVVQELSRNIACRTLFSTHYHSLVEEFSHDPNIRLG
HMSCMVENEDKDPTHETITFLYKFTKGACPKSYGFNAAKLANIPDEIIRIAVKKSREFEE
SIERLRMIRSVWNNGKKESLILLQNQSRVS
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaaaaccaaccccttccaagcaaggaaacacgcttttctcctattttagcaaa
agcccaagcattaataagagtagtggatctgtaagcgatacaagtgaaatattgtcaccg
aagcgatcgccgaatttgaaggacaaagctaatgccaactcaactccaaaacaaactgcg
aagtcatcaaaatcgaatgatgagctagttaaagaatatgagttaggagatttgctttgg
tctaaacttgagggctatccatggtggccaagcctggtttgtaaccatccaacagagaac
acgcatgtcaaaggaggaaaaaatgctcaagtgcatgtacagttttttgatgaccctgtg
tcaaggtcctgggtgaaggttaaaaatgttcgttcatacataggatcagatgacaaggaa
tgccaaaaggggggaactttcttttccatgaacatgttggtaagaaaggctggagacgag
gcagacaaagcaatgaaaatgaatgtggaagatcgtctaaaactagttgtgaatttatta
ccatcagataatgaggacgatgagatggattttgatccggacatatttgatgcagaaatg
gaagaaggagaatctaacaacagtaaagaaaacaaagatatagaacagtctaaaactaca
cctaagaaaacgccaaagaaatctccacgcaaaggcagacggtctgctagacaaccaaaa
cttaaaagacgaaggataatagaaagtaaaaatagttctgatgaagattcaggagatgag
tttaaaccaggttcagacagtagtggtgaagaagatgacagcagtggtgtcgatgaaaat
gatgtatctgatattgaccacgaatcggaaatagattctcctgtcaagaatgaaaacagg
aaacgtaagcgtcctccacctaaacaaaagatcagtgatactccttcaagcttaactcca
tctgccaatagaaattcatttacgccaagtgttggagacaaaaccaagtcaaggctatca
atgttttctgccagtgattcgggtccgagtgttactggatcatcagaacaagaagccaac
tttccacatgtaaaattacctttcttacaaccaggcaaaattttagacattaagggtcac
ccagaatctgacccagattatgatcctagaacagtttctataccagatacttttctgaaa
caacaaacaccaggtatgagacagtggtgggagatgaaatctaaatattatgataccatt
ctattttttaaaatgggtaaattttatgaattgttccacatggatgctgtagttggagtt
aatgaacttggaataatatacatgaagggtgaacaagctcattcaggctttccagaaata
gcatacacaagatatgcctctactttgcttcagaaaggatacaaggttgctagaatagaa
caaactgaaacaccggatatgatgaatgatagactgaaaaccatgtctagaatggccaca
aagtttgacaaagtagtaaggcgtgaagtatgccgtgtgaccactaaaggaacacagaca
tttagttttctggatggtgatgcaacagaggctaaaagtaacttcttacttggtattgct
gaaaaggaagattcctctgaaggttgcagtacatatggtgtttgttttgttgacacttct
ataggcaaatttcatgtaggacagtttacagatgatagatattcctcaagactcaggaca
ttgattgctcattatacacctgttcaggtattgttggaaagagggaaaagttcacagaaa
accaatcaactgatcaacaacaatctaatttctgtcactaaagagtttttggcaccagga
tcagaattctgggagagtggcaagacattgaaacgtttagctgaggaagattattttagt
tcagaggatgaattagtatggcctgatacaataaagaaaatgatctcagacagtgatagt
ttaggtttaactgccgcagatgaatataaccttgccgtcagagctcttggttcagtcaca
tggtatttacagttttgtttacttgatactgatttgttgacaatgaagaattttgaagag
tacactccccttgatgacaatgtgataaaaaccagatcaactatttttactggcaaacag
cacatggttttagatggtgtaacattggccaatctagatgtaacagagaactcgtctaat
ggaacccttgaaggcacacttttacaaagactggatcagtgttctacaccatttgggaga
agattactaaagcagtggctgtgtgctcctttgtgtaatcctgaatcgatcaatgacaga
ttaaatggtgttgaagatttaatggaatctcaagatattgtagcagaagttgtagaaatg
atgaagaaaattcctgatctggaaagaatattaaatagaatccacagtttaggtttatct
aagaagaagaatcatcctgatagtagagctatcttttttgatgaagctaaatacagtaag
aaaaagattgaagagttcctttccacattggaaggtttcaaaacatcatataatattgca
ttaaagttcaaagaaagagtcaaatcatttaagtctaagctgttacagaaaactttgact
ttggtcagtgttcaaggacaaaacggtgtcttcccagatttaaaagatgaaatagtattc
tttgagaatgcctttgatcataacaaagccaagaaagatggtgtaatagtacccaataaa
ggtgttgatcctgattatgacaaagctaagcttgatatcaaaatgacggagagaaaattt
gataaataccttgatgaacagagagacagaattagttgcaggcaaatggtgttttgggga
tcaggtaagaacagatatcaattggaaattccagagagtgctctgaagcgagtgccagat
gaatatgacttgaagtcctctaaaaagggttggaaaagatactggacgtcagacattcag
gacatgttagccgagcttgtagaagcagaagacaggaaggatgtagctcaaagggattgt
atgagaagaatttttgagagttttgatgagagatataaaatatgggatacaacagtacaa
tgtgtggcagtattagatgttttggttgccatggcacagtatagtaggtgtggcgatgga
atcatgtgtaggccagaggtcattgccatagaatcaaatcgagaaccttatatagaaatc
cgagaagccagacatccctgtgttgttagaacgtttggtggcggggattttatacctaac
gatacaattataggtattgcagatgaaaatgatatggagacagatgcagaagatcattca
agtagtaaggttgtcttggtaacggggcccaatatgggaggaaagtccacattgatgaga
caagtaggactgatcactataatagcacagatgggttgctatgtaccggcagagaaatgt
cgtatgacaccagtggatagggtgttcacaaggcttggtgctagtgacagaattatggca
ggtgaaagtacattctttgttgagttgagtgagacagctgccattctgcagcatgctacc
aaacattccttagtattaatggatgaattaggaagaggaacagctacttatgatggtaca
gccattgcttgttctgtagtacaagaactttccagaaatatagcttgtcggacattattt
tctacccactatcattcattggttgaggaattttcacatgatcctaatatcagacttggt
catatgtcttgtatggtagaaaatgaggataaggatccaacacatgagaccattacattc
ctgtacaagttcacaaaaggggcctgtccaaaaagttatggcttcaatgctgctaaattg
gcaaacattccagatgagatcattagaatagcagtaaagaagtccagggagtttgaggag
tcaatagagagattgagaatgatcaggtctgtatggaacaatggaaagaaagaatcatta
atactcctgcagaatcaaagcagggtatcctga
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