KEGG   Mytilus californianus (California mussel): 127723633
Entry
127723633         CDS       T08804                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
mcaf  Mytilus californianus (California mussel)
Pathway
mcaf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127723633
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mcaf03041]
    127723633
Spliceosome [BR:mcaf03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    127723633
 Complex C
   U5 SnRNP specific factors
    127723633
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_DCAF4 eIF2A WD40_RFWD3 Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_HPS5 WD_LRWD1 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 KNTC1_N PEP5_VPS11_N
Other DBs
NCBI-GeneID: 127723633
NCBI-ProteinID: XP_052086293
LinkDB
Position
Unknown
AA seq 345 aa
MDIKRKAGDSAMVPFKKPRTDLVAYGSQEKAVLQMGPPRLSGLEAPIMLLTGTEGEIYTC
KFSPDGQLIASAGFDRLICFWNVYGECENFAVLKGHNGAVMEIQFSTDGNTLFSASTDKT
VALWDVEAGTRIKKMKGHTSFVNACSAARRGPQIICSGSDDGTIKLWDARKRGVQQTFQS
TYQVTSVTFNDTAEQIISGGIDNDIKVWDLRKNDVLYRLRGHADTLTGLTLSPDGSYLLS
NSMDNTLRIWDIRPFAPQERCVKIMQGHQHTFEKNLLRCSWSPDGSKVAAGSGDRFVYIW
DTTSRRILYKLPGHAGSVNEVDFHPNEPIIVSGSSDKKLYLGEIE
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggacatcaaacgaaaagcaggagacagtgccatggtccctttcaaaaagccaagaaca
gatctggtagcttacgggtctcaagaaaaagcagtattgcagatgggtcctcctagactg
tcaggactagaagctcctataatgctattaactggtacagaaggagaaatctatacctgt
aaattctcacctgatggacaactgatagcttctgcagggtttgacaggcttatttgtttt
tggaatgtatatggtgaatgtgaaaattttgcagttttaaaaggtcacaatggagcagta
atggaaatacagttttctacagatggaaatacattattttctgcatcaacggacaagaca
gttgcattatgggatgtagaggcaggcacaagaataaaaaaaatgaaaggtcacacaagt
tttgtgaatgcctgcagtgctgctagaagaggaccacaaataatctgcagtggaagtgat
gatggtacaataaagttgtgggatgccagaaaaaggggagtgcaacaaacattccagagt
acataccaagttacatcggtcactttcaatgacacagcagaacaaataatatcagggggc
attgataatgatattaaggtttgggatttacggaagaatgatgtattataccgacttcga
ggacatgctgatacactgacaggcctgaccttgagtcctgacggttcatatttactgtct
aactcaatggataatacattaagaatatgggatataagaccatttgctccacaagaaaga
tgtgttaaaataatgcaaggtcaccaacatacttttgaaaagaatttattacgatgtagt
tggtctccagatggcagcaaagtagcagctgggtcaggtgacagatttgtttacatatgg
gacaccacgtcacggagaattttatacaaattaccaggacatgctggatcagtaaatgaa
gttgactttcatccgaacgaacccataattgtatcaggatcaagcgacaaaaaattatac
cttggagaaatagaatga

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