Mytilus californianus (California mussel): 127724071
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Entry
127724071 CDS
T08804
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcaf03037
]
127724071
Cilium and associated proteins [BR:
mcaf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
127724071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_8
TPR_6
TPR_19
TPR_16
TPR_14
TPR_7
ANAPC3
TPR_11
TPR_9
ARM_TT21_5th
TPR_10
TPR_CcmH_CycH
ARM_TT21_N
TPR_21
HAT_PRP39_C
ARM_TT21_2nd
TPR_MalT
ARM_TT21_C
TPR-S
Antiholin
Motif
Other DBs
NCBI-GeneID:
127724071
NCBI-ProteinID:
XP_052086873
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MNRMSMMEQTNLAGEDEDEMYSGFNDYNATLDTDDLQHDESFQKAVMRTSHGRRPPPTGK
IPGTAAKGRAAMPSSMGRLTTGQAGGEMARPMTAVRAAGYTSAGHRGGGFDPLNQSGPAP
PLEPKPEDTPEEKIKQLEKKVNELIEESCFANSTGDLSLALEKAKEAGRKERVLVRQREQ
QSMGDQINLDLTYSVLFNLANQYAANEMYNEALNTYNVIVKNKMFSNAGRLKVNMGNIYF
KQRNFPKSIKFYRMALDQVPNAHKEMRTKIMQNIGIVFTKMGQYNDAITSFEHIMSEAPS
FKTGFNLILCYFALGDREKMKRAFQKLLTVDLKVDDEDKYLAHSDDKQYNLVVEVIKNDS
LRQNERARKYEAENCIKTAAKIISPAIEPTFATGYDWCVDQVKNSQYLDLAHDLEIDKAI
MYLKQKDFNQAIETLKSFEKKDSKVASTAATNLSFLYFLENDMAQADKYAEVAMQADRYN
PSALVNKGNVLYTKGDFEKAREFYKEALQNDSSCVEAQYNLGLTNKKLNRLEDALDCFYK
LHAILRNSPQVMYQIADIHDQLEDTAQATEWFMQLIGVAPTDTSVLARTGEIYDNEGDKS
QAFQYYYDSYRYFPSNIPVIEWLGAYYIDSQFCEKAIHYFERAAIVQPNQVKWQLMIASC
HRRSGNYQQALETYKHIHRKFPDNLECLKFLVRICSDLGLKEAQEYATKLKKAEKAKELK
DQRASSGTRRGSGRAKREGSAGSDRETSAGGSRKPSSKGRRSGGNRLALDDDDDGKPYQV
SNKQEIDSTYSDPLGPQMERPKTAAKRMDHDELFDEDVGDDLLPE
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaatgagtatgatggagcaaactaatttagcgggagaagatgaggatgagatg
tattcaggattcaatgattataatgccactttagatacagatgatcttcagcatgatgag
agttttcagaaagctgtaatgagaacaagtcatggcagaagaccaccaccaactggaaag
attcctggaacagcagccaaagggagagcagcaatgccatcttcaatgggacgtttgaca
actggccaagctggaggtgaaatggctagaccaatgacagctgttagagctgcaggttat
acttctgctggacacagaggtggaggttttgaccctttgaatcagtctggaccagctcca
ccacttgaaccaaaaccggaggatacgccagaagagaaaataaaacaacttgagaagaaa
gtaaatgagctaatagaagaaagctgctttgcaaacagtactggagatcttagtctggca
ttagagaaagctaaagaagctggtagaaaagagagagtattggtgagacagagagagcag
cagtctatgggagaccagattaatcttgatcttacttattcggttctttttaacttggcc
aaccagtatgcagcaaatgaaatgtataatgaagctctgaatacttacaatgtcattgta
aagaataaaatgttttcaaatgcaggacgtctaaaggtcaacatgggaaatatatacttt
aagcagaggaactttcctaaatccatcaagttttatagaatggccttggatcaggttcct
aatgcacataaagaaatgagaacaaaaataatgcaaaacataggaatagtgtttactaag
atgggccagtataatgatgccattacatcatttgaacatatcatgtcagaagcaccaagt
tttaagactggttttaacttaatcctatgttactttgctcttggtgatcgtgagaaaatg
aagagggcattccagaaattgttgacagtagatttaaaggttgacgatgaagacaaatac
ttagcacatagtgatgataaacaatacaacttggttgtggaagtaataaagaatgattct
ttgagacaaaatgaaagagcaaggaaatatgaagctgagaattgtataaaaactgcagct
aagattatctcccctgccattgaaccaacatttgcaactggatatgactggtgtgttgac
caggttaagaactcgcagtaccttgatttagcacatgaccttgaaattgataaggcaatc
atgtatcttaaacaaaaagactttaatcaggctatagagactctgaagtcatttgagaag
aaagattcaaaggtagcaagtacagctgcaactaacttatcattcctgtactttttggaa
aatgacatggcgcaggcagacaagtatgctgaggttgccatgcaggctgacagatataat
ccttcagctcttgtaaacaaagggaatgtattatatacaaaaggagattttgagaaggca
agagagttttacaaggaggctctacagaatgactcttcatgtgttgaggctcagtataat
ttaggactgacaaacaagaagctgaatcgtttagaggatgcattagactgtttctacaag
ctacatgctatactgagaaacagtccacaagttatgtaccagattgctgatatacatgat
caattggaagacacagcacaagcaacagagtggtttatgcaattgattggtgtagcacca
acagatacatcagtactggctagaacaggagagatatatgacaatgaaggagacaagtca
caagcattccagtactactatgattcttacagatattttccatccaacattcctgtaata
gaatggttaggagcttactacattgattcccagttttgtgaaaaggctatacactatttt
gagagagctgctattgttcaacctaaccaagtcaaatggcagttgatgatagcaagctgt
catagacgaagtggaaactatcaacaggcattggaaacctacaaacatatacacaggaag
ttccctgataatttagaatgtttgaaatttttggtgaggatttgttccgatcttggttta
aaagaggcccaggagtatgccacaaagttaaagaaagctgagaaagctaaagaactgaag
gaccagcgtgcaagtagtgggacaagaagaggtagtggtagagccaaacgtgaaggcagt
gcaggaagtgatcgtgaaactagcgcaggaggatcaaggaaacctagctctaaaggtcgc
aggtcaggtggtaatcgacttgctttagatgatgatgatgacgggaaaccatatcaagtc
agcaacaaacaggaaattgattccacatattctgatccattaggaccacagatggaaaga
ccaaaaacagcagcaaagcgtatggaccatgatgagctgtttgatgaagatgtaggagat
gatcttctaccagaatag
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