Mytilus californianus (California mussel): 127724574
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Entry
127724574 CDS
T08804
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH-like
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127724574
Enzymes [BR:
mcaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127724574
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127724574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-RING_2
Ycf1
PCP
Motif
Other DBs
NCBI-GeneID:
127724574
NCBI-ProteinID:
XP_052087534
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MGKRKKAVPKRADEEKRRCMTWNLLDGASGSLSICSDNDSQLLKEQIEARAKSCQPSTSS
GVQSQEEYSAVNDSYVQSVLNENLENCVHCVTIQQQLRIKSNEWCKQIATFSLTISEEKP
LFELTDDCLSRTEEFWLYVGCDGCESFIYTEENTANGLKKCKFWCISCSLPSEVLGAFAA
DKIFQLVLERYDQNHQSLDIVVYLRQAALVNMKFACEPLKMKKHSLAVQSIIGHFFGIRQ
HEYISEFTRKHDIEDLYLSVKKHHGIEKNKYTGEASPDIQHPCLIPSLRPYQKEAVRWMM
TQESDTRIYQDKDADLHMLYNVIRLTDGTELYYNKLVGSLTLKKFPVTERLPGGILADEM
GLGKTVEVLACIILNPRTDMMETKTDEGEKIQSVNPETLNGSPVEATDQSVDIPSTNNTN
NGAFVSSDSVKDISDQTVVNTCSDKTSCLTTQEVVVDNQLSRSESVNGSSLDCVNTSSEV
SVSCDKLVETGLDVDQEEQSNQSTPGCELKNDGEISSENSMEDKNTINKLNLGKKGSRKK
STELKEEETEYKNIFDSHKDVGPKEFFECICGTKESKAFKQKDTKSNIQCIQCGLWQHAE
CVNFDLHDLSRPEFMCPHCLVRNKPLKSCATLIISPSSICHQWVDEILKHIHDQTLKVFV
YTGVHKQGFIQPDTLARQDIVITTYETLRKEIDYVDLPHSNSESGRKFRHPKRFMAIPSP
LIAVEWWRICLDEAQMVECTTTKTALMALRLTAVNRWCVTGTPIQRSVEDLYGLFLFLGI
DPFWVKQWFETVLFKPLCHGVTKPLYDTVSSILWRTAKKDVIEQINIPEQTEHIHWLTFS
PVEDHFYRRQYQDCVRDCMKKLSKWADNSTKLSSLDRQTMNQLLYPLLRLRQACCHPQAV
RGEFLPLQKSTMTMEELLESLTKKAKTECEEAHRQIVAALNGQAGLHIIKKQYLEAVDGY
REVLRSVEEHKEELRTDELQQLHALHNLQEVMALKPKGLEPTLRDGQLSDQANDIRHRYM
TRAEAKVTQAQQHLKSVQDNLNQVKDEFAEGSEWWLELIDHAVERGIHEDLVEHIKSDLS
DNAGELGPHISIANVFHDTRGLELVLEQRLEALESAREKLMTSLNMLSQGLTPAMMSETV
ECCLRPVGEISGKCQFCETDQHFQDFESKLYSFTEQGVVMSGDQYQVGTRRQGTWADSQV
EKSLKALLSFAKHQRFNRDVISSGVTHIKVFDVMKKEFKGLRAVWMSLREQVSSVDELEM
ATTRLRLRLPDEAEPTTAQMHIIEPVAIDQHRQKLKADQIVGRCELRKKLGQLLYLKNLA
KTQGDNEDGHNPEPCPICQRELGVEWSVMHCGHCYCLDCMRILLDQYSFGGRNRVVKCAI
CREKTYRSDVSYVSTKKTEDSDDVQNFKVKGSHSTKVQGIVKQMIKIHHKDPEAKILVFS
TWTDVLNVLSTALTENNVEHRMLYHGAKFQQNLASFKEDKHITALLLPIQSGSNGLNLIE
ATYVILVEPILNPAQELQAIGRVHRIGQTRPTEVHRFLVRATIEQKMYSMLKSIETKATS
HDTEENSLTIGDITSLLSEEQRDQDQADEEPEEPVQNHAEDVSGQEEVPVQNLAEDSPGQ
EGEQIQNHGENVPIENVVTEQEVDIDQSLQTPLETIETDEVRENNPTRSEQQVNSFSVNM
SSENSVNLESVDNSVTNAQP
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaagaaagaaggcagtgccaaaaagagcagatgaagaaaaacgaagatgcatg
acatggaatttgttagatggggcatctggttccctgtctatatgttcagataatgattct
caactcttgaaggaacagattgaagctagagccaagtcctgtcagccaagtacttcatcg
ggtgtgcagtctcaagaggaatattcagcagtcaatgactcctacgttcagtcagtctta
aacgagaatctggaaaattgtgtacattgcgtaacaattcagcaacagcttagaatcaaa
tcaaatgaatggtgtaaacaaattgcaacattctcattgacaatttcagaggaaaagcct
ctttttgaattaacagacgattgtttgagccggacagaagaattttggttatatgttggt
tgtgatgggtgcgaaagttttatttacacagaagaaaatactgcaaatggattaaagaag
tgtaaattttggtgtatatcatgttctttacctagcgaggttttgggagcttttgcagca
gacaaaatatttcagttggtattagaaagatatgaccagaatcaccagtcgcttgacata
gttgtctaccttagacaagctgccctcgttaatatgaagtttgcctgtgagccactgaaa
atgaaaaagcatagcttggcagttcagagtattattggtcatttctttggaattagacaa
catgagtacattagtgaattcacaagaaaacatgatatagaagatctgtatctgtctgtc
aaaaaacatcatggtatagagaaaaataagtacacaggtgaggcatcaccagatatccaa
catccttgtctgattcccagtttgaggccgtatcagaaagaggctgtcagatggatgatg
acacaagagtctgatacaagaatttatcaagacaaagatgcagacttacacatgctgtat
aatgttatccgactgaccgatggtacagaattatattataataaattggtaggaagttta
acattgaagaaattccctgttacagaaagacttccaggcggtatattggctgatgaaatg
gggcttggaaagactgttgaagtattagcttgcattatattaaatcctaggactgacatg
atggaaacaaagacagatgagggagaaaagattcaatctgttaatccagagacattaaat
ggttcaccagttgaagccacagaccaatctgtagacattccgagtacaaacaatactaac
aatggtgcatttgtttcttcagattcagttaaagatatcagtgatcagactgtagtaaat
acatgtagtgacaaaacttcctgtttaaccacacaggaagtagtagttgacaatcaactg
tctcgcagtgaatctgtaaacggtagctcattggattgtgttaatacatcttctgaagta
tcagtgtcatgtgataaactagttgaaactggattagatgtagatcaagaggaacaaagt
aaccaatctacaccaggttgtgaattgaaaaatgatggtgagatttctagtgaaaactct
atggaggacaaaaatactattaataaattgaatttgggaaagaaaggaagcagaaagaaa
agtaccgaactcaaagaggaagaaacagaatacaaaaatatctttgatagtcacaaagat
gttggaccaaaagaattttttgaatgtatctgtggaacaaaagaaagtaaagcatttaaa
caaaaagacaccaaaagcaatatacagtgtattcaatgtggactgtggcaacatgcagaa
tgtgtgaactttgaccttcatgacctgtcgaggccagagttcatgtgtcctcactgttta
gttagaaataagccactgaagtcatgtgccactttgattatctccccttcatcaatctgt
catcaatgggtggatgagatcttgaaacatatccatgatcaaacattaaaagtttttgta
tatactggagtacataaacaaggatttatacaacctgataccctggccagacaagatatt
gtcattacaacgtacgaaactctgaggaaagagatagattacgtggatctgccacacagt
aacagtgaaagtggtagaaaattcagacaccccaaaagatttatggctatacccagtcct
ttgatagctgtagaatggtggaggatctgtctagatgaagctcagatggtagagtgtaca
acaacaaagacagctttgatggctctgagattgacagctgtcaacagatggtgtgttact
ggtaccccaattcaaagaagtgtagaagatctgtatggactattcctattcttgggtata
gatccattctgggtaaagcaatggtttgaaacagttttgtttaaaccattgtgtcatgga
gttaccaagccactctacgatacagtgtcatctatactgtggaggacagctaaaaaagat
gttattgaacagattaacataccagaacagacagaacatattcattggctgacgttttct
cctgttgaagaccacttttatagaagacagtatcaagattgtgttagagactgtatgaag
aaattaagtaaatgggcagacaactctacaaagttaagcagcttagacagacagacaatg
aaccagctgttgtatccattattgagattaagacaagcgtgttgccatccccaggcagtg
agaggagaatttctacctttacagaaaagtacaatgaccatggaagagctgttagaatca
ctgacaaagaaagcaaaaactgaatgtgaagaagctcacagacaaatagtagcagcattg
aatggtcaagcagggttacatatcataaaaaaacagtatttagaggcagtagatggatac
agagaggtattgaggtctgtagaggaacataaggaggagttacgtactgacgagttacag
cagttacatgctttacataatctacaggaagtaatggcattgaaacctaagggactggag
cctacactcagggatggtcagttgtctgatcaagcaaatgatataagacacagatatatg
accagagcagaggccaaagtaacacaggctcagcagcatcttaagtctgtacaggataat
cttaaccaagtgaaagatgagtttgcagaaggatcagagtggtggctagaattgatagac
catgctgttgagagaggtattcatgaggatcttgtggaacacatcaaatcagacctatct
gacaatgctggagagttaggaccacacatatcaatagctaatgtgtttcatgacactaga
ggattagaattagttttagaacagagacttgaggccctggaatctgcacgtgagaaactg
atgacttccttaaatatgctgagtcagggactcactcctgccatgatgagtgagactgtt
gagtgctgtttgagaccagttggtgaaatatctggaaaatgtcagttttgtgagacagac
cagcactttcaagactttgaatcaaaactatattcttttacagagcaaggtgtagttatg
tcaggggaccagtaccaggtgggaaccagaagacaaggaacttgggcagatagtcaagtg
gagaagtcacttaaggctttacttagctttgccaaacatcaaagatttaacagggatgta
atcagctctggtgtaacacacataaaggtctttgatgttatgaagaaagaatttaaggga
ttgagagctgtatggatgtccttaagagaacaggtatccagtgtagatgagttagagatg
gctactaccagactgaggctgaggttaccagatgaagcagagccaactacagcacagatg
catatcatagaaccagtcgcaatagaccaacatagacagaaactcaaggctgatcaaatt
gtaggaaggtgtgaattgagaaagaaacttgggcagctgttatacctaaagaatctagca
aaaacacagggtgacaatgaagatggacacaatccagaaccttgccccatatgtcaaaga
gaattaggagtagaatggagtgtgatgcattgtgggcattgttattgtttggattgtatg
agaatattattagaccagtacagttttggcgggagaaatcgtgttgttaaatgtgccatc
tgccgagagaagacctacagaagtgatgtgtcttatgttagtaccaagaagacagaagac
tcagatgatgtccaaaattttaaagttaagggcagtcattctaccaaagtacaaggaatt
gtaaagcagatgataaaaattcaccacaaagatcctgaagcaaaaatcctcgtcttttct
acatggacagatgtactgaatgttttatctacagcgcttacagaaaacaatgtagaacac
agaatgttgtatcatggggctaaatttcagcaaaatttggcatcatttaaagaagacaaa
cacataacagccttactgcttcccatacagtcaggatctaatggtttgaatctgatagag
gctacttatgttatcctagtagaaccgattcttaaccctgcgcaggaactccaggccatt
ggtcgtgttcataggattggacaaactagacctacagaagtccacagatttctagtaaga
gctacaattgaacaaaagatgtacagcatgttaaagtctatagagaccaaagctactagt
catgatacagaggaaaattccctcactataggagacattacctctcttttatctgaagaa
caaagagatcaggatcaagcagatgaggaaccagaggaaccagttcaaaatcatgcagaa
gatgtgtcaggacaggaagaagtaccagttcaaaatcttgcagaagattcacctggacag
gaaggtgaacaaattcaaaatcatggggaaaatgtcccaatagaaaatgttgttacagaa
caggaagttgatatagatcaaagtttgcaaaccccattggaaactattgaaacagatgaa
gttagagaaaataatcctacaaggtcagaacaacaagtgaacagcttttctgtgaacatg
tcgtctgaaaacagtgttaatttagaatcagttgacaattcagttacaaatgcacaaccc
tga
DBGET
integrated database retrieval system
