Mytilus californianus (California mussel): 127724588
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Entry
127724588 CDS
T08804
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127724588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcaf03041
]
127724588
Spliceosome [BR:
mcaf03041
]
Complex C
Other components
Step II factors
127724588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
127724588
NCBI-ProteinID:
XP_052087566
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MLALQQYSSDEDNSDHENKDHLEDLTAHLRPINQKNAISSTIQLKAAPDIFTKDDIQVNR
HLDSTTKEVKYNPKYEELFAPEIGPNNPFKTQQMLAPRNMMSGFAEPAHISDFQFDNQRK
TFTSYGYAIDPSVDNVIAEPKLVGDSSKSDDNKGKTVFELTQKRPEDKRKRQRNDDSSDI
EGYLGPWGKFVDEKTVMKPNEEEKKELDEILAKRSKTGKQTEEKPSEEKTTLHVKDAYDY
QGRSFLCPPQDVGINLKSDEPPEKCFLPKKLIHTWTGHTKGVATIKWFPRSGHLILSCGM
DSKLKIWEVYNDRRLVRTYSGHKQAVRDACFNNSGTEFLSCAYDRFCKLWDTETGECKAR
FTSKKVPYCIRFNPDEDKQHLFVAGTSDKKIICWDIRSGEIVQEYDRHLGAVNALEFVDQ
NRRFVSTSDDKSMRIWEWGIPVDFKYIADPSMHSMPAIKLSPNGKWLACQSMDNKICIFN
VLNRFKYMRKKLFTGHMVAGYACQPDFSPDMSYVISGDADGKLYVWDWKTTKLYTKFKAH
DDVCATVLWHPHETSKVASCGWDGVIKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgttggcacttcaacaatacagcagtgacgaagacaattcagaccatgaaaacaaagat
catttagaggatctcacagcccatctcagaccaataaatcagaaaaatgcaatttcttca
acgattcagttgaaagcagcaccagatatttttacaaaagatgatatccaagttaacaga
catttagattcaacaaccaaggaagtcaagtataaccctaaatatgaagaactttttgca
ccagagattggtcccaataatccctttaaaacacaacagatgttggcccctaggaacatg
atgtcaggatttgcagagcctgcccatatcagtgactttcagtttgataaccagagaaag
acattcactagttatggatatgccattgatccatctgtagataatgtcatagcagaacca
aaactggttggggattcttctaaatcagatgacaacaaaggtaaaacagtttttgaactg
acgcaaaagaggcctgaggacaagagaaagaggcagagaaatgatgattcttcagacata
gaggggtatttgggtccatggggcaagtttgtggatgagaaaactgtaatgaaaccaaat
gaggaagaaaagaaggaacttgatgaaatactcgcaaagagaagtaaaacaggaaaacag
actgaagaaaaaccgtctgaggagaagacaactcttcatgttaaagatgcctacgactac
caagggagatcattcttatgtccaccacaggacgttggtataaatctaaaatcagacgaa
ccaccagaaaaatgttttttgccaaagaaattaatccacacctggacagggcatacaaag
ggtgtagctaccataaaatggttccccagatctggtcatttaattttatcatgtggtatg
gattcaaaattaaagatttgggaagtatataatgatcgtagactagtcagaacttacagc
ggacataaacaggctgttcgtgatgcatgttttaataactcaggtacagaattccttagc
tgtgcttatgacagattctgtaaactttgggatactgaaacaggggagtgtaaggcaaga
tttaccagtaagaaagtgccttattgtataaggttcaatccagatgaagataaacaacat
ttgtttgtggctggtacttcagacaagaaaattatctgttgggatataaggtcaggtgaa
atagttcaggaatacgacagacatttaggtgcagtaaatgctttagaatttgtagatcag
aacagaagatttgtgtcaacatctgacgacaaaagtatgagaatatgggaatggggaatt
cctgtggattttaaatacattgctgatccttctatgcattctatgcctgcaattaaattg
tcaccaaatggaaaatggttagcatgccaatctatggacaataagatctgtatatttaat
gtactgaacagatttaaatatatgagaaagaaactttttactggtcatatggtagcaggt
tatgcttgtcagccagatttttcaccagatatgagttatgtgatatcaggagatgcagat
ggaaaactttatgtatgggactggaaaacaactaaactttatacaaaattcaaagctcac
gatgatgtgtgtgccactgtgttatggcatcctcacgaaacctcaaaagtggcatcatgt
ggatgggatggtgtgataaaatactgggactga
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