Mytilus californianus (California mussel): 127725725
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Entry
127725725 CDS
T08804
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-like isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127725725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mcaf03032
]
127725725
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127725725
DNA replication proteins [BR:
mcaf03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
127725725
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
127725725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
TopBP1_BRCT0
LIG3_BRCT
BRCT_TopB1_SLF1
Motif
Other DBs
NCBI-GeneID:
127725725
NCBI-ProteinID:
XP_052088872
LinkDB
All DBs
Position
Unknown
AA seq
1695 aa
AA seq
DB search
MSEGDFKMYCIRADGSSGRNGATKAMFDAFANLEKEGFKPQWMFESDCLKVEKKEKNSAY
LFDKFIGEGFNHVQSLKCRIFGPQCILSSLEHKLDIPRRSTPIFNLAMKDLVVCCSNLDK
EIREELHKKVEMMGGEASKTLTDQVTHLVTGEVGSKKYQVSGDLGKQIMLPLWVEKVWEK
SSDGHIHGADVQFHECSCPVFYGLVITVSGFDSTERGEMKTMIEAEGGKYTGEMKVKECT
HLIINKPKGQKYEFARKWKMHIIKSEWLYDSVEKGYCLDESKYGLEGSRDSGVKTSTPEK
GKAKNRVSSIADISSISNISMIGNYQVNETAAMTRMNDTAATTRSDMTTFSETQAQKNDH
IESSLQTIDLTRPPSDLFLDGCKIYLSGFCGQDLEKMKKVINAGGATRLNQLNEAVTHVI
LGVRIDRDIELLTTNTFRPQVVSPAWLAECYRNGRTVDEAPFSCLDLPPAESESPKLTVS
KQKKLERKDSIQNKTLEPEKIKPDEDDHKEEEEMDIMSQYLIQPMGENTQDKTMKDEDKP
TTIEQKPVEIEENEMTQNPNGDSQTQKKVFTGKSFMFFGFEEEQHTPLTEFVNEEGGKVY
QGNTRLVPDYGVVPVDGFPVDKTVGEIATSTWLQMCAESDTLLPVSSNPLFSPVDINIED
NPLMDCILSFSGWFGTEKECLMHIAQCIGAQTQEYFVRNAKKGLLPTTHLITKEASGQKY
TAAKNWGIPALSKMWILACAKSGKPEPIEKYLIDNQLNTAEENEPELNKTVPNAILNDRN
ESLKQESTIKGDNKASELTDKKVNNYEQEVQANNSKRDSIANSKHKDISKRGSGNLSVGM
ETMEAMEGFNSEMTIDSALPADKSKENIRDEENLDTVSTNNPKPFQESQKENVHQKKEPI
PVQPKVVNQRVKALQNDDFEATPKNSSKRASINSPSPGRFLDPTKEFRPKWDLTDVMKCL
ETPPAEKARNAKRRQSQPLEELFTTKLQRAVEISEGATTATRGSDEVDGSCMDGLSQQEA
GPLKGVVIAVSKKLSSHQAEYNNMVSLLGGDYRWAYDESCTHFIFQSNRANDTTKEFRVA
RDQKKIIVSSHWLLMCKEQNAWVDESLFPHNYNPNLTLSVSRKKTGTPARTPARSSRKAT
RGSSRLESASDMKPEILTFDQEVEKTLKKPVQKLMESDKETVSESDTDNEIRSRLGQGQL
DTNAEIRSRLGNVVEVEEEITKGGRRNRKSSINSGDEDRGKEAAVPAAGSMEMREVLSKE
MESIMAASKTKKAMRRRSKRLNCSGNLSGDLSGSADKNSSRQNRWSLTDDKVEKKTPTNS
GKALENHSGPEPSQSVQVTWDDHTGRLEQEKLAHKLERACSPTQDVAEFLDGEFSEEEED
LDYEEGLHEPEAEVPQEKPKEERVPTPEGPSLAFHKSKKEDNRIPSPEPINEEEPVQKPP
PVFIMSGMEPAEKDNYGALVEQLGGKILESLHFDCSCTHLVIGKPTRNEKFLASVASGKW
VLHKSYFEACRQERRFVQEDFYEWGGDGTQSLLNQQTAKLAAAAYRWRIKVQNTLQSTNQ
CIGAFDGWTVLLNCDKVKDDNFKRLLEAGGATVLQNKPPYEENISASHAFLDLSKKPLQP
SDIQVLLGNNILCLKPEFIAAHLTDNPPPNPQDYCPQEISGFISLSSGSDRNKRKALSLS
STSDSENKSKRTRKR
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggggactttaaaatgtactgcatcagagcagatggcagctctggtagaaat
ggtgccactaaagctatgtttgatgcatttgccaatcttgaaaaagaaggatttaaacca
cagtggatgtttgaaagtgattgcttaaaagttgaaaagaaagaaaagaacagtgcttac
ttatttgacaaatttataggagaaggttttaaccatgtacagagtctcaagtgcagaata
tttggtccccagtgcatattatcatccttagaacacaaactggacattccacgaagatcg
actccaattttcaacttagccatgaaagaccttgttgtttgttgctcaaacctagataaa
gagattagggaagaacttcacaagaaagtggaaatgatgggtggagaagcaagtaaaact
ttaacagatcaagtcacacaccttgtcacaggagaagttggcagtaaaaaataccaggtt
tcaggtgaccttggaaaacagatcatgttaccattatgggtggaaaaggtgtgggagaag
tcatcagatggacatatccacggtgctgatgttcagtttcatgaatgctcgtgtcctgta
ttctatggattggttataacagtttctgggtttgattcaacagaacgaggagaaatgaag
accatgatagaggcagagggtggcaaatatacaggtgaaatgaaggtcaaagagtgtact
catctcatcatcaataaacctaaaggtcagaaatacgagtttgctaggaaatggaagatg
catattatcaagtctgaatggttgtatgattctgtagagaaaggctactgtcttgatgag
agtaaatatggattagaaggcagtagggattcaggggtaaagacatctacaccggagaag
ggaaaagcaaaaaatagagtttctagtattgctgacatcagcagcatctctaacatctcc
atgataggtaactatcaggtaaatgagacagctgccatgacaagaatgaatgatacagct
gctacaacaagatctgacatgactacattcagtgagacacaagctcagaagaatgatcat
atcgaatcatcactacaaaccatagatctgacacgtccaccttcagatctattccttgat
ggttgtaagatttacttgagtggtttttgcggacaagaccttgaaaaaatgaaaaaagtg
ataaatgctggtggtgctacaagacttaaccagttaaatgaagctgtcactcatgtcata
ctgggagtaagaattgacagagatattgaattactaactacaaacactttcagaccacag
gttgtttctcctgcctggcttgcagaatgttaccgtaatggtagaacagtggatgaagca
ccattctcatgcctagatctacctccagctgaatcagaatcacctaaattaacagtcagc
aaacagaagaaacttgaaagaaaagacagtattcaaaacaagactttagaaccagaaaag
ataaaacctgatgaggatgatcacaaggaagaagaagaaatggatattatgtcacagtat
cttatacagccaatgggagaaaatacgcaagataaaaccatgaaagatgaagacaaacct
acgacaatagagcaaaaacctgtagaaatagaggaaaatgaaatgactcaaaatcctaat
ggtgacagtcagacacagaaaaaggtgtttacagggaagtcatttatgttttttggattt
gaggaagagcaacatactccattaacagaatttgtaaatgaggaaggaggaaaggtttat
cagggaaacaccagactggtaccagattatggagttgttcctgttgatggatttcctgtg
gacaaaacagttggagaaatagcaaccagtacttggctgcaaatgtgtgcggaatctgac
acacttttaccagttagtagtaatccactgttttctcctgttgatatcaacattgaagat
aatccattgatggactgtattttatcattcagtggttggtttggaacagaaaaggaatgt
ctgatgcatatagcccagtgtataggtgctcaaactcaggaatattttgtgagaaatgcc
aaaaaaggacttttgcctacaactcatttgataaccaaggaggcctctggtcaaaagtac
actgctgccaaaaattggggaataccagcattatctaaaatgtggattttagcatgtgcc
aaatctggaaaaccagagccaatagaaaaatatctcattgataaccaactaaatactgca
gaagagaatgaaccagaacttaataaaactgtcccaaatgcaattttaaatgatagaaat
gaatctctcaaacaagaaagcacaataaagggagacaacaaagccagtgaactaactgat
aaaaaagtaaacaattatgaacaagaagtccaagcaaataattcaaagcgtgattctata
gcaaattctaaacataaagacatttcaaaacgtggaagtggtaatctttctgttggcatg
gaaacaatggaggccatggaaggttttaattctgaaatgacaattgacagtgcattacct
gcagacaagagcaaagaaaatataagagatgaagaaaatttagacacagtatcaacaaat
aatcctaaaccttttcaagagagtcagaaagaaaatgttcatcagaaaaaagaacctatt
cctgtccaaccaaaagttgtaaatcagagagtaaaggcattacaaaatgatgattttgag
gctacaccaaagaactcttccaaaagagccagcataaattctccctcaccaggaagattc
ctggatcctacaaaggaattcagaccaaaatgggatcttacggatgttatgaagtgttta
gagactccaccagcagaaaaagcaagaaatgccaaaagaagacagagccagccattagag
gaacttttcaccaccaagttacagagagcagtagaaatatctgagggagctacaacagct
acaaggggatcagatgaagtagatggctcttgcatggatggactctctcaacaagaggca
ggaccattgaaaggagtagttatagctgtgagtaaaaagctgagttctcaccaggctgaa
tacaacaatatggtatcattactaggaggagattatagatgggcgtatgatgaatcatgt
acacattttattttccagagcaatagggcaaatgataccactaaagagttcagggttgca
agggaccaaaagaagattattgtttcatctcattggttgttaatgtgtaaagaacagaat
gcctgggtagatgagtcgttgtttccacacaactacaatccaaatcttacactgtctgtg
tcaagaaaaaagactggtaccccagcaagaacaccagctagaagtagcagaaaagcaaca
agggggagttcacggttagaatcagcaagtgacatgaaaccagaaattttaacctttgac
caggaagtagaaaaaacattgaaaaagccagtacaaaaattaatggaatctgacaaggaa
acagttagtgaaagtgacacagataatgaaataaggtcaaggttaggtcaaggacaactg
gacactaatgctgaaataaggtcaaggctagggaatgtagtggaggttgaggaagaaata
acaaagggtggaagaaggaataggaaaagtagtataaattctggtgatgaagatcgaggg
aaagaggcagctgttccagcggcaggctcaatggaaatgagagaagttttatcaaaggag
atggaaagtattatggcagcatcaaaaactaaaaaagcaatgaggagaaggagtaaaaga
ttaaattgtagtggtaatctgtccggtgacctgtctggtagtgctgataaaaatagttcc
agacaaaacagatggagtttaactgatgataaagttgaaaagaagactccaacaaactca
gggaaagcattagaaaatcactcaggacctgagccttcacagagtgtgcaggtcacatgg
gatgatcatacaggaagacttgaacaagaaaaattagctcacaaactggaacgagcatgt
agccctacgcaggatgtagctgagttcctggatggggagttctctgaggaggaggaggac
ttggattatgaggaagggttgcatgaacctgaagctgaagttcctcaagaaaaacctaaa
gaggaaagagttccaactcctgaaggtccatctctagcattccacaagtcaaaaaaggaa
gataatagaattccctctccagaacctatcaatgaagaggaaccagtccagaaaccaccc
cctgtgttcataatgtctggcatggaaccagctgaaaaagataattatggtgctttagtg
gaacagcttggagggaagatattagaatctctacactttgattgttcatgtacacatcta
gtcataggtaaacctacaagaaatgagaagtttttagcaagtgtagcatcagggaaatgg
gttctacacaaatcttattttgaagcttgtcgtcaggagagacgatttgtacaggaagat
ttttatgaatggggaggtgatggtacacaaagtttgctcaatcaacaaacagctaaactg
gcagctgctgcatacaggtggaggatcaaagttcaaaatactttacagtcaactaatcaa
tgtataggtgcatttgatggttggacagtgctactgaattgtgataaggttaaagatgac
aattttaaaagattgctggaggcaggaggtgctactgttttacaaaataaacctccatat
gaagaaaatatttctgcttcccatgcattccttgaccttagcaaaaagcctttacaacct
tctgatatacaggttctattgggtaacaacatactttgtctgaagccagaatttatagca
gctcatctaactgacaatcctcctcccaatcctcaggattattgtcctcaggaaatatca
gggtttatttctttatcatcaggttcagataggaacaaaagaaaagcattatctctttca
tcaacatcagacagtgaaaacaaaagtaaacgcacaaggaaaagatag
DBGET
integrated database retrieval system
