Mytilus californianus (California mussel): 127726369
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Entry
127726369 CDS
T08804
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127726369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127726369
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127726369
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127726369
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127726369
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
127726369
NCBI-ProteinID:
XP_052089688
LinkDB
All DBs
Position
Unknown
AA seq
1822 aa
AA seq
DB search
MFGAKPTGFAFGNSANNFGQTAGFGGGNTTFGSAKPTGTAFGTPGGGGVFGAATPAVTPG
GGLFGQQNPSSTGGGLFGATQPQNPGFGQSSGFTFGATPTASSSGGGLFGQQPQSAGGLF
STPATNTGFGAKPTGFGASFGASTSTPSGGIFGQTQQTPSLFGQAGTSAGFGGNVPSGTT
LKFNAPSSSDTMVKNGQTTNINTRHQCITAMKEYQMKSLEELRMEDYAANRKGKQPGSGG
LFGTQPTATQQQSTGFNFGMTASPFGQQQQQQQQQQPASTGSTLFGAQPQSSAGALFGQT
NKPLFGTATTSTAGFGFGGSAGTGTSLFGNQNKPLFGSTQAATTQSSLFGSSGTTGFGAS
TGFGGGAGGFGTSTSTGGLFGTNKPAFGATPVTSTTGFGQTNLFNKPAGTGLFGATPQAP
AFGTSTGSSLFGAKPVGFGTTTSAPSFSLGGTPGGLFGANTAKPAGFGFGTSTGASTFTG
FGGGFNATQPSLNLGGASTMLSTRKKQMFELAANPQNSGPTPQQIQQQLLALNHSPYGDS
PLFWNLKQTETKREDLLKPTNPIAQKAVLTSQFKVSPRPTARVKPKSLHNVLNGSKSQIF
EGLEDEDFSFGNESFMPKKSIKKLVLRKTGTESNSPSRASSVIEDLHNEQSLNDTDPSFL
QNTSHSMPIERSVSKDIPEPENNLRFQKAPSQNLDDTIAMLNEQNKGGKLSSRSADETDL
DITQRDESLERRPKTPTPPHAAGIVLTRPEYYTLPSMEELAEMVNENGDCFVDGFTIGRE
GYGSVYFPGVVNVAGLNLDEIVHIRRKEVIVYPDDDNKPDQGDGLNRKAEITLDCVWPVD
KTTRKPIQDPERLKAMNYHEKIEGITARIGGRFTDYRPETGSWVFEVKHFTKYGMDESDE
DDLSELAQHQAKMQATAQLKPGQPPPAQSGMSDRAPVQSVPVTDSRQDRVVPMADDDDDI
IQDITQEKIPDDILQDLEDEDMDDQPSSHKLASSMGVSARNVQVMKASFFNEDVIGDGGQ
KTLFSKPAAKKQGDVPSLFSSAYKSKYMSPVKLTHLPKEAELRRNDQGGLFHNRILTPEP
IRPSKPTYQPPPVAEHMPLASGLNPDDFPRKIVGSRVQRPIPNFRDSLMYDKQFMIKDAG
LFMGRSFRVGWGPGGMLAHCGRTVSEVQKEESNKDTSHFTILPGMGQTNIGQSEWKVHIE
KLDIAGYVRAKDPTVINNHVEMLSVQLENSESTLEGDCPIFVPSSGVEGLHQCAKQVKQD
LQESDNHPEKALLEQMDRVLDLCVALWGRLPDCISDEPVEGYDYQHSRREALSKWLMSTA
VQRIQEDVQEAKYKGKDHLPAILAYLSGRKISEACLLAQKSGDHRLALLLAQTESHYVVR
QLVEKQLIEWAELGADKYINIVRMKIYALLSGQLVWRAPVEPYTMINTCETMDWKRALAL
HLWFLCPSNSPIHQALLDYEAGFKGRSSCGIYCNPPLPPYSEGVLDCPIEEEDEGHMLRD
TCYHVLKLYCQKSHRLNRLLNPTSSTENQLDYRLSWHLYQILQSLDYKHLSPYHRAYIHM
NFASQLESIGLWHWAVFIVLHIEDKQCRESAVKDLLYRYVTLSTDKDKEDFLQEKLNIPV
RWIHYAKALRAKHENKSHEEALHLLKSGHWNASHKVILKHIAPDAIINENHEYLKKYLKE
LSNPAHSSKISDWHYGGQVFLDYINQCEAVEKFKQALSGEEQQRPSGYDIESLVHSVTTL
CAKVGNLQCSNSKERLCQSEMSKIAAVLLRTLLLLQGHSVGSSDYLPLTMLAPHISNLPM
PEDYRIQELRALTRSNMMETTA
NT seq
5469 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagcgaagccaacaggatttgcctttggtaatagtgcaaataactttggacaa
acagctggatttggtggtggaaacacaacatttggttctgccaagccaacaggaactgca
tttggtactccaggtggtggtggtgtctttggagcagccaccccagctgtcacacctggt
ggtggtttgtttggacaacagaatccaagttctactggtggtggattgtttggtgccaca
cagccacagaacccaggttttggacagtcatcaggtttcacttttggagctacaccaaca
gctagcagttctggtggggggttgtttggacagcagcctcaaagtgcaggagggctgttc
tctacaccagctaccaacacaggatttggtgcaaagccaactggatttggagcaagcttt
ggagcaagtactagtacaccatctggtggaatatttggtcaaacacaacagacaccatct
ttgtttggacaagcaggcacaagtgcaggctttggtggaaatgtgccaagtggaacaaca
ctgaaatttaatgcaccatccagttcagatacaatggtgaaaaatggacaaacaacaaat
atcaacacaagacaccaatgtatcacagctatgaaggaataccaaatgaaaagcttagag
gaattaagaatggaagattatgctgctaaccggaagggtaaacaaccaggaagtggaggg
ttatttggaactcagccaacagctacccaacaacaaagtacaggatttaactttggaatg
actgcaagtccctttgggcaacaacagcaacaacaacaacaacaacaaccagcttcaact
ggatcaacattatttggagcccagccacagagttctgcaggagcattatttggtcaaact
aacaaaccattgttcggaactgcaacaacaagcactgcagggtttggatttggtggcagt
gctggtactggaacttctttgtttggaaatcaaaataagcctttatttggaagtacccaa
gcagctacaacacagtcttcattatttggaagctcaggaacaacaggatttggagcatcc
actggctttggtggaggggcggggggattcggtactagtacctccacgggagggttattt
ggtactaacaagccagcatttggggctacacctgtgacatcaacaacagggtttggtcag
acaaacctgtttaataaacctgcagggactggactctttggggctactccacaagcacca
gcttttggtaccagtacaggtagcagtttatttggagctaaaccagttggatttggtact
acaacatcagctcctagcttcagcctaggtggaactcctggtggcctgtttggagcgaac
acagctaaacctgctggatttggttttggtactagtactggagctagtacttttacaggt
tttggaggaggattcaatgcaacacagccttcattaaatctgggaggagccagcacaatg
ttgtcaacgaggaaaaaacaaatgtttgaattggcagccaatcctcagaattcaggaccc
accccacaacagatacaacaacagttactagctttgaatcactcaccctatggggattca
cctctattttggaacctcaaacagactgaaactaagagagaagacttgttgaagccaaca
aatccaatagcacaaaaagctgtattgaccagtcagttcaaagttagtccaagaccaaca
gccagagttaaaccaaagtcattacataatgttcttaatggttctaagtcccagatattt
gaaggactagaagatgaagactttagttttggtaatgaatcgttcatgccaaagaagagt
attaagaaacttgtattaaggaaaacaggaacagaatctaattccccaagtcgtgcctcg
tcagtgatagaagatttacacaatgaacaatcgctcaatgatactgatcctagcttcctt
cagaatacttctcatagcatgccaattgaaagaagtgttagtaaggacattccagaacca
gagaataatctgagattccagaaagcaccaagtcagaacttagacgacaccatagccatg
ttaaatgaacagaacaaaggtggaaagttgtcgtcccggtcagctgatgaaacagattta
gatataacacagagagatgaaagtctagaaagaagaccgaagacccccacccctccacat
gctgcaggtattgtcctgactcgacctgagtattacacactccctagcatggaggagtta
gcagagatggtgaatgagaatggtgattgttttgttgatggtttcaccattggtagagaa
ggatatggtagtgtgtacttccctggagtcgtcaatgtagctggacttaatctagatgag
attgtacatatcagaaggaaagaggtgatagtttatcctgatgatgacaacaaacctgat
caaggagatggtctgaacaggaaagcagagataacattggactgtgtctggcctgtagac
aagactacaagaaaacccattcaggatccagaaaggttgaaagcaatgaattaccatgag
aaaatagaagggatcacagctaggataggtggcaggtttacagactatagaccagaaact
ggatcatgggtattcgaggttaaacattttaccaaatatggaatggatgaaagtgacgag
gatgacctttctgaactggcccaacaccaagctaagatgcaggccactgcacaattaaaa
ccaggccagcctccaccagcacagtctggtatgtctgacagggcaccagtgcagagcgtc
cctgtaacagattcaagacaagacagagtggtacccatggcagatgatgatgatgatatc
atacaagatatcacacaggagaagattcctgatgacatattacaagatttagaagatgaa
gacatggatgatcagccatcatcacacaaattagccagcagtatgggtgttagtgccaga
aatgttcaggtcatgaaggcctctttctttaatgaggatgtcattggagacggtggtcaa
aagacattattttccaagccagcagcaaagaaacagggagatgttccaagtctgtttagt
tctgcttataaatcaaaatacatgtcccctgttaaactgacccatcttcctaaagaggca
gaattacggagaaatgaccaaggtgggttattccacaatagaattctcacaccagaaccc
attcgaccaagtaaaccaacataccagcccccaccagttgctgaacacatgccactggcc
agtggtctcaacccagatgactttcctagaaaaatagtagggtcaagagttcagagacca
attccaaactttagagattcactgatgtatgataaacagtttatgataaaggatgctgga
ctgtttatgggacgctcctttagagtagggtggggaccaggtggcatgttagcccattgt
ggtagaacagtatcggaggttcagaaagaagagagtaacaaagatacctcacattttacc
atacttcctggaatgggacagactaatattggacaatcagaatggaaagttcatatagaa
aaattagacatagctggctatgtcagagctaaagatcctacggttattaataaccatgta
gagatgttaagtgtacagttagaaaactcagaaagtacgttagagggtgactgtccaata
tttgtaccgtccagtggagtggaaggtttacatcaatgtgctaaacaagtcaaacaagat
ttacaagaatcagataatcatccagaaaaggctctcctggagcagatggacagagtgtta
gacttgtgtgtagctttgtgggggagattaccagactgtatttcagatgagccagtagaa
ggatatgactatcaacattccaggagagaagcattgtctaaatggttgatgtcaactgct
gtacagagaatacaagaagatgtacaggaggccaaatataagggcaaagatcatctgcca
gctatattagcatatttgagtggaagaaaaatttcagaagcttgtttattggctcaaaag
tcaggtgaccatagactggcattgctgttggctcagacagaaagtcattatgttgtcaga
caactggtagaaaaacaactgattgaatgggcagaacttggggcagataaatatataaat
atagttcgcatgaagatttatgccttgttgtctggacagttggtatggagggcacctgtt
gaaccttacaccatgattaatacatgtgaaactatggattggaaaagagcactagcttta
catttatggttcttgtgtccatcgaattcaccgatccatcaggctttgttagattatgag
gcaggcttcaaagggagatcatcttgtggaatatactgtaatcctccgttaccaccatat
tcagaaggggtattagattgtccaatcgaagaggaggatgaaggtcacatgttaagagac
acttgttatcatgttttaaagttatattgtcagaaatctcatcgcttaaacagactgtta
aatcccacatcctcaacagagaaccagttagactataggttaagctggcatctataccag
atattacaatctttagattacaaacatctgtccccctaccacagagcctacatccacatg
aactttgcttcacaattggaatctattggattatggcattgggctgtttttattgttcta
catatagaagacaaacaatgtcgggaatcagcagttaaggatctcctgtacagatatgta
acattgtccacagataaagataaggaagacttcctacaggagaaactcaatattcctgtc
aggtggatacactatgctaaggcactgagagcaaagcatgagaataaaagtcatgaggaa
gccctacatttactgaaatcgggtcactggaatgcaagtcataaagtcatactaaaacat
atagctcctgatgccatcattaatgaaaatcacgagtatcttaaaaaatatctgaaagaa
ttatccaacccagcacacagcagtaaaatatcagattggcattatggtggacaagtgttc
ctggattatatcaatcaatgtgaggctgtagaaaaatttaaacaagctctaagtggagaa
gagcaacaaagaccgagtggttatgacatagaaagcttggtacacagtgttacaacatta
tgtgccaaagtgggaaatttacagtgttcaaattcaaaagaaagattatgccaatctgag
atgtctaaaatagcagccgttttactgagaacattattactattacaaggacacagtgta
ggatcttctgattatctccccttaacgatgttagctccacatatcagcaatttaccaatg
ccagaagattacagaatacaagagttacgggccttgacaagaagtaatatgatggaaaca
actgcatga
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integrated database retrieval system
