Mytilus californianus (California mussel): 127727117
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Entry
127727117 CDS
T08804
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127727117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127727117
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127727117
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127727117
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
127727117
Chromatin remodeling factors
BAF complex
127727117
PBAF complex
127727117
GBAF(ncBAF) complex
127727117
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
BRK
HSA
Bromodomain
QLQ
ResIII
DEAD
HDA2-3
DSRM_MRPL44
Motif
Other DBs
NCBI-GeneID:
127727117
NCBI-ProteinID:
XP_052090507
LinkDB
All DBs
Position
Unknown
AA seq
1645 aa
AA seq
DB search
MATGEEGNMMAGPPMNPSYQQQQPQDNVQMIQKAISQMEDKGMQGDPRYAQLMAMAERAR
SGGMHPQGMQGSGGPQGMPPQHHGMQNPYGNRMGPGGMGPQGMPSGQHPMQSGPQGMPPG
APQGMHGVQQQGIPSNQGMGTPHRMGSMHQGMPNAQSGMPGPVQSMGAPNMSGPPNMPNV
SSGGPGYSMNVQNVPNPTGSGQMNPNMAGGGGNVMPGHPSGQSGMGHPGQQQGMSPMMNR
AASQPNMASSNQGMDGDQTQQGHQGIQQPGNKMTAFNPSQLSQLRAQIMAYKFLARNQSI
PENLRAAVEGKRPPFTGMPRPQDSHQNQPQRIPSQSQSQPQQGPQPSYQSGATQGVPPTQ
QQQQPKPNQQTPPPSSLQAMMTMQKQSKIAPVQKPQGLNPIDILNERENRIAARIGHRIK
ELHNLPAVMPEDMKCKAMIELRALRLLNFQRQLRTEVVACMRKDTTLETALNTKAYKRNK
RQTLREARVTEKLEKQQKMDQERKKRQKHQEYLNAVLQHAKDFRDFHRSIQTKVNKVNKA
IMMHHANTEREQKKEQERLEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLSQTDEYITN
MMSLLAEHKEDIRKKKMERKKKKKKGVEAVNPEVLDESSNTSDMRVSVVETATGKILFGE
GAPLASQLDTWLELNPGYEVAPRVDGEEDDESGEEEEEKPEESQPPVIPEITPKKVLKSS
EDLDEEEAKKILSSATHEDDEYENLKVKEAQNYYSLAHTVKEEVEQASIMVNGLLKEYQL
SGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMERKRVNGPFLIIVPLSTLSNWV
IEFEKWAPSVVKIAYKGSPNSRRLLLPILKAAKFNVLLTTYEYIIKDKAALCKIRWKYMI
IDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKCCATF
EQWFNAPFAMTGEKVELNSEETLLIIRRLHKVLRPFLLRRLKKEVESQLPDKIEYVIKCE
MSALQRYVYRHMQAKGVMLTDGSDRKGGKGGARAMMNTIMQLRKICNHPFIFPHLEEAFA
EHQGLGKREVTGPDLYRAGGKFELLDRILPKLKVTNHRVLLFCQMTTLMSVMEDYFVFRG
YRYLRLDGTTKCEDRGQLLALFNDPESPYFVFLLSTRAGGLGLNLQAADTVVIFDSDWNP
HQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEEKILAAARYKLNVDEKVIQAGMFDQKSTG
IERRQMLQQLLLQDQEDGEEEDEVPDDETVNQMMARSEEEFEMFQQMDIDRRREEAKNPN
RKPRLMEDDELPDWILKDENEVDRLTFEDDNEVYGKGSRQRKEVDYTDSLTEKQWLKAIE
DGNLDEVEEQQKVIKKPPKKRKAEKEVKEKEPKGGSDKPKKRRGRPPVEKQPPNPPKLTK
IMKKIMSIVLRYKDSDNRVLSTEFINVPSKKLYPEYYELIDRPIDFKKVKNKIKDHKYRS
LEALEEDVMLLCENAQSYNIEGSAIHEDSIVLQSVFTNARQRIEKEMGNGLGDSDGSSSD
EETENEDGEEEDDEDKASKSKTPSKKAPEKERISTRKRKTRIQKPMISDDEDEEEEDSDS
SDDDLPLQSSKTSPRNSPGTSGKKK
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atggctactggagaagaaggcaacatgatggctggtcccccaatgaacccttcttaccag
cagcaacaaccacaagacaatgttcagatgatacagaaggcaattagtcaaatggaagac
aaaggtatgcaaggagatccaaggtacgctcaactcatggctatggctgaacgtgcaaga
tctggtggcatgcatccacaaggaatgcagggtagtggtggaccacaaggcatgccacca
caacaccacggtatgcaaaatccatatggtaatagaatgggacctggtggaatgggtcca
cagggaatgcctagtggacaacacccaatgcaaagtggacctcagggaatgcctcctggt
gctcctcaaggtatgcatggtgtccaacaacagggaatcccttcaaaccaaggaatggga
acaccacacagaatgggcagtatgcatcaaggtatgcctaatgcccagagtggaatgcct
ggacctgtacaaagtatgggagctccaaatatgtctggtccacctaatatgcctaatgtt
tccagtggtggtcctggttattccatgaatgttcaaaatgtacctaaccctactgggtct
ggacagatgaatccaaacatggctggtggaggtggtaatgtgatgccaggacatcctagt
ggtcagagtggaatggggcacccaggacaacagcaagggatgagcccaatgatgaataga
gctgcatctcaaccaaatatggcatcctcaaatcaagggatggacggtgatcaaactcaa
caaggtcaccaaggaattcagcaacctggaaataaaatgactgcattcaatccatcacag
ctatcacaactccgtgcacaaataatggcttacaaattccttgctagaaaccagtccatt
cctgaaaatctaagggcagctgttgaaggcaagagaccaccttttactggaatgccaaga
cctcaagattctcatcaaaatcagccacaaagaattccatcacaaagtcagtcccagcct
caacaaggtccacagccaagctatcaaagtggagccacacaaggagtgccgccaactcaa
caacaacaacaaccaaaaccaaatcaacagacccctcctccttcctctttacaggctatg
atgaccatgcagaagcaaagtaaaatagcaccagttcagaaacctcaaggactaaatcct
attgatattcttaatgaaagggaaaatagaattgcagccagaattggacacagaatcaag
gaattacataatcttcctgctgtaatgcctgaggatatgaaatgtaaagctatgatagaa
ttaagggccctcaggttactcaattttcaaagacagttgagaactgaagtagttgcctgt
atgagaaaagatacaacattggagacagcactaaacacaaaggcatataaacgtaataag
agacaaactctcagagaggcaagagttactgagaaactggaaaaacaacaaaaaatggac
caagaaaggaagaaaagacagaaacaccaggagtatctgaatgctgttctacaacatgct
aaagactttagagatttccaccgtagtatacagactaaggtcaacaaagttaacaaggcc
atcatgatgcaccatgctaacacagaaagagaacaaaagaaagaacaagaaagactagaa
aaagaaagaatgaggagacttatggctgaagatgaagaagggtatagaaagttgattgat
cagaagaaggacaaacgtctggcctaccttctatctcagacagatgagtacattactaat
atgatgtccctcttagcagagcataaagaagacataagaaagaagaaaatggaacggaag
aaaaagaagaaaaaaggggtggaagcagtcaacccagaggtactggatgaaagctctaat
accagtgatatgagagtttctgtggtagagacagcaacagggaagattctgtttggagaa
ggtgctcctctagctagtcaattagatacttggttagaactaaatccaggatatgaggtg
gcaccaagagttgatggtgaagaggacgatgaaagtggagaggaagaggaggagaaacca
gaggaaagtcaaccaccagttataccagagatcacaccaaagaaggtcctcaaatcatca
gaagatttagatgaagaggaagctaagaaaattctaagtagtgccactcatgaggatgat
gagtatgagaatttaaaggttaaagaagcccagaattactatagcttggcccacactgtc
aaggaagaagttgaacaagcttctatcatggtcaatggattgttaaaagaatatcagctg
agtggattggaatggctagtatcattgtataataataacctgaatggaattttggctgat
gaaatgggtctaggtaaaactatacagactattggactgatcacatatctaatggagagg
aagagagtgaatggtccattccttatcattgttccattgtcaacattatctaactgggtg
atagagtttgagaagtgggcaccatctgttgtgaagattgcctataaaggttctcctaac
tcgaggaggctgttattacctatcctgaaagctgccaaatttaatgtacttcttaccaca
tatgagtatatcatcaaagacaaagctgctttgtgcaagatacggtggaagtatatgatt
attgatgaaggacatcgaatgaagaatcaccactgtaaactgacacaggtgttaaacact
cattacttggctcctcacagattgttattaacaggaacaccattacagaataaattgcca
gagttatgggccttgttgaatttcttgttgccaagcattttcaaatgctgtgccacgttt
gagcagtggtttaatgcaccatttgccatgacaggagaaaaggttgaattgaactctgag
gagacattgttgattatcagacgtctacacaaagtactacgtcccttcttgttaagaaga
ctgaagaaagaagtcgaatctcagttaccagacaagattgaatatgttattaagtgtgaa
atgtcagccttgcagagatatgtttaccgtcacatgcaggctaagggtgtgatgcttact
gatggaagtgacagaaagggtggtaaaggtggagctagagctatgatgaatactataatg
cagcttagaaagatttgcaatcatccatttatctttccacatttagaggaagcttttgct
gaacaccaaggacttggtaaaagagaagtcactggcccagatttgtacagagcaggagga
aaatttgagttactggacagaatactacccaaactaaaggttacaaatcacagagttttg
ttgttttgtcagatgacaacgttgatgagtgtaatggaggattactttgtcttcagaggt
tacagatacttgaggttagatggaacaacaaaatgtgaagatagaggacaattattagca
ttgttcaacgatcctgaatcgccttactttgtcttcttactgagtactagagcaggtggt
ttgggtctcaatctccaggctgctgatactgttgttatatttgattctgactggaatccc
caccaggacttgcaagctcaggacagagctcacagaataggacagaggaatgaagttaga
gttttgaggttgatgacagtaaacagtgtggaggagaagatcttggcagctgctagatac
aaactgaacgtagatgagaaagtcattcaggctggtatgtttgatcagaaatctactgga
atagaaagacgacagatgttacaacagttactgttacaagatcaggaagatggagaggaa
gaagatgaggttccagatgatgaaacagttaatcagatgatggctagaagtgaggaagag
tttgagatgtttcaacaaatggatatagacagaaggagagaggaagcaaagaatcctaac
aggaaacctagactaatggaagatgatgaactgcctgactggattttgaaagatgaaaat
gaggttgacaggttaacatttgaagatgacaatgaagtgtatggtaaaggttctagacag
aggaaggaagtggattatacagattctctcacagaaaaacagtggctaaaggccattgag
gatggtaatttggatgaagttgaagaacaacaaaaagtgattaagaaaccaccaaagaag
aggaaggcagagaaagaagtcaaggagaaagaaccaaaggggggttcagataaaccaaag
aaacgtagaggaagacctccggtagagaaacaaccaccaaacccacctaaacttacaaaa
atcatgaagaaaattatgtctattgtgcttagatataaagacagtgacaacagagttctg
agtacagagtttataaatgtaccgtccaagaaactttatccagagtattatgagttgatt
gacagaccaatagattttaaaaaggtcaagaacaagattaaagaccataaatacaggagt
ttggaagccctagaggaagatgtaatgttattgtgtgagaatgcccagtcttataacatt
gaaggatctgcaatccatgaagattctatagtactgcagtctgtgtttactaatgctaga
cagagaatagagaaagagatgggaaatggattaggagactcagacggtagtagtagtgat
gaagaaacagaaaacgaggatggagaggaagaagatgatgaagataaagcctcaaagtca
aaaacaccaagtaaaaaggcccctgaaaaagaacgtataagtacaaggaaaaggaaaaca
aggattcagaaaccaatgataagtgatgatgaggacgaagaagaggaggactctgatagt
agcgatgatgatctaccactccagtcttcaaagacttcaccaaggaattctccaggaact
agtggcaagaagaagtga
DBGET
integrated database retrieval system
