Mytilus californianus (California mussel): 127728442
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Entry
127728442 CDS
T08804
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127728442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127728442
Enzymes [BR:
mcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127728442
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127728442
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-Sec23_Sec24
FYVE_2
Motif
Other DBs
NCBI-GeneID:
127728442
NCBI-ProteinID:
XP_052091761
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MTDTGDRIQPNFKNLTHTDYGKPNDMQHMPLQELTKPHVDSFNYMLEEGLGKAVQLIYPV
EFALPNGDRISFTVLDANIYKPVVSQSNKTSVNLKVYPAECRQRFVTYKGNFQITFVWKI
NNKPQDTVERTIGEIPIMVKSKRCNLQGLSPSELVKHGEEAEEMGGYFIVNGLEKIIRML
IMPRRNYAMCMIRPSWRSRGKQYTEYGVQIKCVRQDQTGMNNVLHYLSNGSATIGFGYLK
ELFYVPVMFILKGLLNVTDKYIYDQLVKGKEDDSFYKGCIVFMLRQALTEDLTSQNKVLQ
YIGSKFRIKLPLPEWYSDEEVGQFLIRECICIHLESNTDKFNLLIFMIRKLFAFSKGECA
AESADSPANQELLLGGHLYLAVLKEKIESWLISLKATIQRNAKTKEGSYKLTSKTLEDAF
RHTSDISKSVEYLLSTGNLVSRSGLGLMQTSGLAVVADKLNFYRYLSHFRCVHRGAFFAE
MRTTAVRKFLPEAWGFLCPVHTPDGAPCGLLNHMTAFCQAVNIQYPTAHLYKLLISLGVT
PFDAPPPGNLKDCFPVLLDGKHMGYLHSSIAKKVEQKLRVMKVKALKQVPTMMEICLIPK
TEFASQYPGLYLFTTPARMMRPVKNLALDTTEMVGSFEQVYMDICINQSEAIPGVTTHEE
FSEIRMLSSLACLTPYSDCNQSPRNMYQCQMGKQTMGTPCHAYKYRADNKLYRIQTPQTP
MVRPGMHDHYNVDNYPMGTNAVVAVISYTGYDMEDAMILNKSAFERGFAHGSIYKSELID
LRKKAQDKYRTVLVFGSKSGDKRTEGKLDPDGLPPIGTYLQDGDVFYSYSNLQTGEYKVE
KYRKSEPAYVDHIKIIGNDTGTGDLEKVCIVLRIVRNPIVGDKFSSRHGQKGICSMLYPV
ENLPFTESGMVPDIIFNPHGYPSRMTIGMMIESMAGKSAASHGHCYDATPFKYTEDQPPI
DYMGKMLNAAGYNYYGTERLYSGVDGRELEADIFIGIVYYQRLRHMVSDKFQVRTTGPID
QVTHQPVKGRKRGGGIRFGEMERDALISHGSAFLLQDRLLNCSDSSLAHVCKKCGSILSP
YMDRPPSANAAVSAEQERKWACSICKQTKSIELIKVPYVFKYLVAELAAINIKVNLDIQA
F
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgacagacactggggatagaatacagccaaattttaaaaatttaacacatacagattat
ggcaagcctaatgatatgcaacatatgcctttgcaagagctaacaaaaccccatgttgat
tctttcaattacatgttagaggagggattgggaaaggctgtgcagttgatttatcctgtg
gagtttgctttaccaaatggagacagaatatcatttacagtattggatgctaatatatac
aaaccagtggtttctcaaagtaacaagacttcagtcaacctgaaagtttatcctgcagaa
tgtcgacagaggtttgtgacgtacaaagggaatttccagataacatttgtatggaaaata
aacaacaaaccacaggatacagtcgaaagaactattggagaaattccaattatggttaag
tcaaaaagatgtaacttacaaggattatcaccatcagagctagtaaaacatggagaggag
gcagaggagatgggaggttatttcatagttaatggattggagaagattataagaatgctg
attatgcctagaagaaattatgctatgtgtatgataagaccatcatggagatctagaggt
aaacagtacacagagtatggagtccagataaaatgtgtcagacaagatcagacaggcatg
aataatgtgcttcactacctatctaatgggtcagctactatagggtttggatatctgaaa
gaacttttctatgtaccagtcatgtttatattaaagggattattgaatgttacagacaag
tatatttatgatcagttagttaaaggtaaagaagatgattcattttataaagggtgtata
gtatttatgttgagacaagctttaacagaagatcttaccagtcagaataaagttctacaa
tatatagggtccaagttcagaattaaattacctctacctgaatggtatagtgatgaggaa
gttggacagtttttaatcagggagtgcatttgtatacatctagaaagtaatacagataaa
ttcaatcttttaattttcatgataaggaaattatttgccttttctaaaggagaatgtgca
gcagaaagtgcagatagcccagccaatcaggaattgttactaggtggccatctctacctt
gctgtccttaaggaaaagatagagtcatggttaatttcattaaaagcaactatacaaaga
aatgccaaaactaaagaaggatcctacaaattaactagcaaaacactggaagatgcattt
agacacacctcagatattagtaaatctgtagaatatttactttcaactggtaacctggta
tcaaggtcaggtcttggtttaatgcagacatcagggttagcagttgtggcagacaaactc
aatttctacagatatctttcacatttccgttgtgttcatagaggagctttctttgctgag
atgagaacaacagcagtccgaaaatttcttccagaggcttggggttttctatgtcctgtg
cacacacctgatggagctccttgtggtctcttaaatcacatgactgcattttgccaggct
gtcaacatacagtatccaacagctcatctatacaagttactgatatcacttggtgtgacg
ccatttgatgctcctccaccagggaaccttaaggactgtttccctgttttacttgatggt
aaacacatgggatatcttcattcatctatagctaaaaaagtagaacagaaattgagggtc
atgaaagtcaaagctttgaaacaggttcccacaatgatggagatatgtctgattcccaaa
acagaatttgctagtcagtatccaggtctgtacctgtttacaacaccagccaggatgatg
agaccagtaaagaatctagcattagataccacagagatggttggatcatttgaacaagtt
tacatggatatctgtatcaatcagagtgaggctattcctggggtgacaacacatgaagaa
tttagtgaaattagaatgttatcgtctttggcttgccttacaccctactcagactgtaat
cagagtccaaggaacatgtaccaatgccagatgggtaaacagactatgggaacaccatgc
catgcctacaagtacagagctgataataagttatacagaatacagacaccccaaacacca
atggtcagaccaggcatgcatgatcactacaatgtagacaattatcccatgggaactaat
gctgtggtagctgttatatcatacacaggttatgacatggaagatgccatgattttgaat
aaatcagcatttgagagaggatttgctcatggatctatttataagtctgagctgattgat
ctgagaaaaaaagctcaagacaaatacagaaccgtgctagtatttggtagtaaatcagga
gacaaaagaacagaaggaaagctggatcctgatggtttgcctcctattggtacatatcta
caagatggagatgttttttacagctactccaatctgcagacaggagaatataaagtagaa
aagtatcgtaaaagtgaacctgcttatgttgatcacatcaaaataattggtaatgacact
ggaacaggcgaccttgaaaaagtctgtattgtacttagaattgtgagaaatcccattgta
ggagacaaattttccagtagacatggacagaaaggtatctgtagtatgttgtatccagta
gaaaatctaccatttactgagagtggaatggttccagatattatattcaaccctcatggt
tatccatctagaatgacaattggtatgatgatagagagtatggcaggaaagtctgctgct
tcacatggccactgttatgatgcaacaccatttaaatacacagaagaccaaccaccaatt
gattatatgggaaaaatgctgaatgcagctggatataattactatgggacagagagatta
tatagcggagtagatggaagggaattggaggcagacatctttattggcattgtctattac
cagagactaagacacatggtgtctgacaaatttcaggtacgaaccacaggtccaatagat
caggtgacccatcagccagtgaaaggaaggaagagaggaggaggaataagatttggagag
atggaaagggatgctttgatatctcatggttcagcatttttattacaggacagacttctc
aattgttcagattcatcattagctcatgtatgcaaaaaatgtggaagtattttatcacca
tacatggacagacctccatcagctaatgcagcagtatctgcagaacaagaacgtaaatgg
gcatgttctatctgtaaacaaacaaaatctatagaacttatcaaagtgccttatgtgttc
aaataccttgtagcagagttagcagctatcaatataaaggtaaacttggatatccaagca
ttttaa
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integrated database retrieval system
