Mytilus californianus (California mussel): 127729203
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Entry
127729203 CDS
T08804
Name
(RefSeq) ribonuclease 3-like
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127729203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127729203
03009 Ribosome biogenesis [BR:
mcaf03009
]
127729203
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127729203
Enzymes [BR:
mcaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
127729203
Messenger RNA biogenesis [BR:
mcaf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
127729203
Ribosome biogenesis [BR:
mcaf03009
]
Eukaryotic type
90S particles
RNase
127729203
Prokaryotic type
rRNA processing factors
127729203
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
127729203
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
RM44_endonuclase
dsrm
Motif
Other DBs
NCBI-GeneID:
127729203
NCBI-ProteinID:
XP_052092867
LinkDB
All DBs
Position
Unknown
AA seq
1370 aa
AA seq
DB search
MSFRNNQMFQRSNQFQASTPQAFNQQQQIGNVRFTPNTSTARMQNMFNPLQTSVQAGMPP
WGAGVAVQAGQQNFQPQIIPAGLQNPAMANMTNPQQNAANMMGLLANQQLLAQAAGLVAT
PGLGVGMQVPFTGQGILGAGPMRGQLPQVFQNVGQTGLGSSGQYSPKSNMNQRNSKSSNQ
NRGRQSNERSSGNKDQRSFDRSRSDNRGSRDQSKDRKIREDKKDPRREDKRDDRKSVRGD
DQRDSKNVDRRSEGSRDNRKFDRPEDRKNDFREDRKSRYDRNIDRLDDRRGVRKDDKNIL
RKDEGKRDDKSVDKRKPFIDRKDSERRNVKGDNRNRGEGDRSKGEGDRSRDYGRRSNQGS
RSRRDDDQSDNASSPDKKRMRTKDSTKPSTSTKKSKNEDQESYSEIEDTLEDVMEEEIPA
WLRCSPSDLYFNRDNKTGCLLATKRMKDLEDRFENEVILRAERIRDSRPKVDLPSRPPPK
LHIHKQCCSHQTEDSCSSSSSSDSSDEDDEDDEWVEELNKKKNHPYRLHEELWYNDPGEM
NAGPLCRCSIKSRKTGIRHNKYPGEQAISACDPESNNSNKLYHYKITMSPPTNFLTKCPS
IIDYDNHEYIFEGYSLFSHSKLENIPVCKVIRFNIEYSIQIVEQDLLQNYTVRSLDLFCK
FLFTEILELVDIDWKGPGDSEHCNRFHLMPRFARSLPENGKEILSMNVVLNYLLRSSKPM
VDETMLKQVPDYDANDWQNIVDDVRGMVVTYPGMKPCSLRIDQLDRSHVGDGEDDESAYP
LIIHFGIRPAQLSYAGDPNYQKLWKQFVKFKHLLNSKPKILFTDKQKLQQKEDQLNELRL
KNTMKREVTVEISAKGFVRTGIKSDITQHTMLIPVLLDHLRFHNALTKLEKDIQYNFQDR
GLLQLALTHTSYKVKYGTNTDHARNSLSNCGMRQLEYGDRKIHFQHTRKRGINILINIMS
RMGNKEEMLSEIPHNERLEFLGDAVVEFISSVHLFFMFPWLEEGGLTSYRTALVQNQHLA
VLAKNLHLDEYMLYAHGPDLCHESDLKHAMANCFEALMGALFLDGGIEVTDRIFSNTLFG
DSDELLQTWKEIPLHPLQEDEPNGDRHWIQSSPALQKLLKFEEITGIQFDHIRLLARAFT
VRSVGYNNLTLGHNQRLEFLGDTVLQLVASEYLFKHFPDHHEGHLSLLRSSLVNNRTQSI
VSDDLGMSDHIIHAETRGESIDMKTKEKADLLEAFIGGLYVDKGLTYCRVFCHVCFFPRL
QDFIKNQVWNDPKSQLQQCCLTLRDLDGGEPDIPIYKMIESIGPTNTRRYKVAVYFKGER
LATGTGHSIQQAEMAAAHNSLKERSELFPILAHQKRFLERKYKSIENQRR
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaggaataatcaaatgtttcaaagatcaaaccagtttcaggcatcaacacct
caggcctttaaccaacaacaacagattggaaatgtcagatttactccaaatacctcaaca
gctaggatgcaaaacatgttcaacccactacagacatcggtacaggctggaatgccaccg
tggggggcaggggtagcagtgcaggcagggcaacaaaactttcagcctcagattatccca
gcagggttacagaatcctgcaatggccaatatgaccaatcctcaacagaatgcagctaac
atgatgggattgctagctaaccaacagttactggcacaggcagcaggcttagtagcaact
cctggtctaggagttggaatgcaggtgccttttactgggcaagggatacttggtgcaggt
ccaatgagaggacagttacctcaagtatttcaaaatgtaggacaaactggcttaggtagt
agtggacaatattcaccgaaatcaaatatgaatcagcgtaattctaaatcatccaatcaa
aatcgtggtcgtcaatcaaatgagagaagttcagggaataaggatcagcggtcatttgat
agatcaagaagtgataatagaggaagccgtgatcagagtaaagatagaaaaattagggag
gataaaaaagatccacgacgtgaggacaaacgagatgatagaaaatcagtcagaggagat
gatcagagagacagtaaaaatgttgacaggcggagtgagggaagtcgagacaataggaaa
tttgatcgaccagaggatagaaaaaatgatttcagagaggacagaaaaagtcgttatgac
aggaacattgatagactagatgacagacgaggtgttagaaaagacgataaaaatattctg
agaaaagatgagggcaaaagggatgataaaagtgtagataaaagaaaaccattcattgac
agaaaagatagtgaaagaagaaatgtaaagggagataacaggaacagaggcgaaggtgat
cggtcaaagggagaaggagataggtcaagagactatgggaggagaagtaaccaaggcagt
aggtctcgtagagatgacgaccaatcagacaatgcttccagcccagacaagaaaagaatg
aggacaaaagacagcacaaaaccctcaacctctacaaagaagtcaaagaatgaagaccaa
gagagttattcagagattgaggatacactagaagatgtgatggaagaagagataccagct
tggttgaggtgttctccgtcagatctgtacttcaacagagacaacaaaactggatgtctc
cttgcaacaaagaggatgaaagatttagaagatagatttgagaatgaagtaatattaaga
gcagagagaattagggactccagacctaaagttgacctaccatctagaccaccaccaaaa
ctacatatacataaacagtgttgcagtcatcaaacagaggacagctgtagtagtagcagc
agctcagattctagtgatgaggatgatgaggatgatgaatgggtagaggaactgaataaa
aagaaaaatcatccatacagacttcatgaagagttatggtacaatgatccaggagagatg
aatgcaggtccattatgtagatgtagtattaagtccagaaaaacaggaataagacacaac
aagtatcctggtgaacaggcgatttctgcatgtgacccagaaagtaacaacagcaacaaa
ttgtatcattacaaaattactatgtctccacctacaaactttttgactaaatgtcccagt
attattgattatgacaatcatgagtatatatttgaaggatactccttgttctcccacagt
aaacttgagaatattcctgtgtgtaaagtgatacgattcaacatagagtactctatacaa
atagtagaacaggatttattacagaattatacagtgaggagtttggatttgttctgtaag
tttttattcacggagatattagagttagtggatattgattggaaaggtcctggtgattcc
gaacattgtaatagattccacctaatgccaagatttgctaggtctttaccagaaaatggg
aaggaaattttatccatgaatgtagtactgaattatctgttacgtagctctaagcctatg
gtagatgaaactatgctgaaacaagtcccggattacgatgccaatgactggcagaatatt
gttgatgatgtcagaggaatggttgtcacatatcctggaatgaaaccatgttcattacgt
atagaccaattagatagaagccacgtgggggatggtgaggatgatgaatcagcttatcca
ctaattatacattttggtatcagaccagcacaactgagttacgcaggagatcctaattat
cagaagctatggaaacagtttgtcaagttcaaacatttactgaacagtaaacccaaaatt
ttatttactgacaaacaaaaattacaacagaaagaagatcagctgaatgaattaagattg
aaaaacacaatgaagagagaggttacagtagagattagtgctaaaggattcgttcgtaca
gggatcaagtcagatatcacccagcacactatgttgataccagtactactagatcatttg
agatttcacaatgctttgacaaagctagaaaaggatatacagtataacttccaggacaga
ggtttattacagcttgccctgacacatacatcctataaagtgaaatatggaacaaataca
gatcatgcaaggaattcattatctaactgtgggatgagacagttggagtacggggacaga
aaaatacatttccaacatacccgtaaaagaggaatcaatatactgataaatataatgtct
agaatgggaaataaagaggaaatgttatcagaaataccacacaatgaaaggttagaattc
ctaggagatgctgtcgtagaatttataagcagtgtacacctgttctttatgttcccttgg
ttggaggaaggtggactgacaagttacaggacagccttagttcagaatcaacacttagca
gtactagctaaaaatctacacttggatgagtacatgttatatgcccatggacctgatctg
tgtcacgaatcagatctcaaacatgcaatggccaattgttttgaagcattaatgggggca
ttgtttttggatggcggtattgaggttacagatagaatattctctaacactttgtttggt
gatagtgacgaattacttcagacatggaaagaaataccacttcaccctttacaagaagat
gaacctaatggagacagacactggatccagtctagtcctgctttacagaagctgctcaaa
tttgaagaaattacagggatacagtttgatcacatcagactgttagcccgagcttttaca
gtgagatctgttggttataataacttaacattgggacacaatcagagacttgagtttctc
ggtgacacagttttacagttggttgcttcagagtatttatttaaacattttcctgaccat
catgagggacatttatctttattaaggagttccttggtaaataacagaacacagtccatt
gtctcagacgaccttggaatgtctgatcatatcattcatgctgaaactaggggagagagc
attgatatgaaaacaaaagaaaaggcagatttattagaagcatttattggaggtctttat
gtggacaaagggttgacttattgtcgagttttctgtcatgtctgtttcttcccaagacta
caggatttcattaagaaccaagtatggaatgatcctaaatcacagttacaacaatgttgc
ctgactctccgtgatcttgatggtggtgagcctgacattccaatttataaaatgatagag
tctataggtccaactaacacaagacgttacaaggtagcagtttacttcaaaggagaacga
ctggccacaggaacaggacatagtatacaacaggctgaaatggctgcagctcataattct
cttaaagaacgatcagaattatttccaatattggctcaccaaaagaggtttttagagagg
aaatataaaagtatagaaaatcaaaggaggtga
DBGET
integrated database retrieval system
