Mytilus californianus (California mussel): 127729204
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Entry
127729204 CDS
T08804
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04140
Autophagy - animal
mcaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127729204
04148 Efferocytosis
127729204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcaf04131
]
127729204
Membrane trafficking [BR:
mcaf04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
127729204
Hops complex
127729204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
WD40_WDHD1_1st
FIMAH
Motif
Other DBs
NCBI-GeneID:
127729204
NCBI-ProteinID:
XP_052092868
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MATADWNPLGEVYLRKTELYSMGWADIVDLNKFVAVASCQYGGPIALLRDDAQTARVQVS
TKPVITTYTAAGYQIGQMRWNSGQIVKMGWTVTEDLLCVQDDGVVLVYDFFLNFKRTFGM
GQEAKDVKVIDCQIFNSFQGTGIAILTSTFRIFIINSVDDPRIRRLAEVPGLQTAPSSWT
IINLDRQSRALVAKGKELYLIDHGGQFQYQSPQISAEVNEYVMMSVSYSNKYLAMFTDSG
VIWIGSSDLQKCYCEFNTKSPQCPQQLAWCGSGAVVAMWDKIMLVVGPDKDWIKFQFDSP
VHLTQEDDGLRIIQNYQHEFLHKVPDVTEKIFKIGSMEPGAMLYEANREFMKGSQKADEY
VRMIKDKLDIAVDQCIQASGHELEPTKQKQLLRAASFGKCFLTDYNPQAFVDMCQMLRVL
NQVRNHVIGIPLTYTQLEKLTTTVLIDRLVLRKFFAYAIKISQYLKIPEAEGSSRILAHW
ACYKVKQKNQDDEIIARAIAQKLGDTPGVSYSEVANEALECGREELAIRLLDYEPRAAHQ
VPLLMKMHKDQIALSKAIESGDTDLVYTVLLRLKESMTQGDFLMSIRSMPISYSLFLQYC
RQQNPKLLEDLYYQEDNFIEEGNCKVMRSFDDERLDDRTETLNQAIKCYQKGRHDFVIKQ
TEDQIKLLKYQRRLEEEFNRPYMDLSLHQTIYRLTVENNYKVSEQLRKEFKVPDRRYWWI
RIQGLAEAGEWVELDKFSRNKKPPVGMEAFVEVCAKHHNVNEAMKYMSRVSPEHKVRCLV
KVGNKKAAADTAFENRNEEELNFVLSKCGHSDRQLVESIKSMKQQLGLKR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccgactggaatcctcttggggaagtttacttaagaaagactgagctgtat
tctatgggatgggctgacatagtagatctcaataagtttgtagctgtggcatcatgtcag
tatggtggaccaatagcattattacgagatgatgcacaaacagcaagggtacaggtcagc
actaagccagttatcaccacctatacagcagccggttatcagataggacaaatgaggtgg
aacagtggacagatagtgaagatgggatggacagttacagaggatctgctctgtgtacag
gatgatggtgttgtcttagtctatgacttcttccttaatttcaaaagaacatttggaatg
ggacaggaagccaaagatgtgaaggtgatagactgtcaaatttttaatagtttccaagga
actgggatagccattttaacgagtacatttagaatatttataatcaacagtgttgacgat
cctaggatacgacgattggctgaagttccaggattgcagacagcacctagtagctggacc
ataataaacttagatcgtcagtcccgagcacttgtagctaaagggaaagaactttatttg
attgatcatggtggacagttccagtatcagagtccacagatttcagcagaggttaatgaa
tatgtaatgatgtcagtttcttacagtaataaatacctggccatgtttacagattcaggt
gtaatctggattggctcctcagatttacagaaatgttattgtgaatttaatacaaagtca
ccacagtgcccacaacaattagcatggtgtggcagtggagctgttgttgccatgtgggat
aaaatcatgttggtagtgggaccagataaagattggatcaaatttcagtttgattcccct
gtacacctgacacaagaggatgatggacttcgcattatacaaaattatcagcatgagttt
ctacataaagttccagatgtaacagagaaaatatttaagataggatcaatggaaccaggt
gccatgttgtatgaagccaacagagaatttatgaaaggaagtcagaaagcagatgagtat
gtcagaatgataaaagacaaactagatatagcggtagatcaatgtatccaggcatcgggt
catgaactagaaccaacaaaacagaaacagttattaagggctgcttcctttggaaagtgt
ttcttaacagattataatccacaagccttcgttgacatgtgtcagatgttacgagtactt
aaccaagtcaggaatcatgtgataggaataccattgacatatacacaattagaaaaatta
acaacaactgttttgatagatagattagtactgaggaaattctttgcatatgctatcaag
ataagtcaatatttgaagataccagaagctgaaggaagttctagaatactggctcattgg
gcatgttataaggttaagcagaaaaatcaagatgatgaaatcattgccagagcgattgcc
caaaaacttggtgatacacctggtgtctcctactcagaagtagctaatgaagctctggaa
tgtggcagagaagaattagccattagattactagattatgagccaagagctgcccatcaa
gttccacttctgatgaagatgcataaagatcaaatagcattatcaaaagctatagaaagt
ggagatacagatttagtgtatacagtacttcttagattgaaagaatccatgacacaaggt
gactttctgatgtcaattagaagtatgcctatatcatattccttgttcctacagtactgt
agacaacagaaccctaagttactggaggatttatactaccaggaagataattttatagag
gaaggtaactgtaaagtcatgaggagctttgatgatgagagattggatgatagaacagaa
actctgaaccaagctattaaatgctatcagaaaggcagacatgattttgtgattaaacaa
actgaggatcaaatcaaattattaaaatatcaaagacgtttagaggaggaatttaatcga
ccatatatggatttgtcattacatcagactatttatagattaacagtggaaaataactac
aaagtttcagaacaacttagaaaagaatttaaagttccagatagaagatactggtggata
agaattcaaggtttagcagaggcaggggaatgggtagagctagataaattttcccgcaac
aaaaaaccaccagttggaatggaagcttttgtagaggtttgtgcaaagcaccataatgta
aatgaagctatgaagtatatgtccagagtcagtccagagcacaaagtcagatgccttgtt
aaagtagggaacaagaaagcagcagcagatacagcatttgagaacagaaatgaagaggaa
ttaaattttgttttgtcgaaatgtggacattctgatagacagttggtagagagtatcaaa
tcaatgaaacaacagttaggcttaaaaagataa
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