Mytilus californianus (California mussel): 127729219
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Entry
127729219 CDS
T08804
Name
(RefSeq) retinoic acid receptor RXR-like isoform X1
KO
K08524
retinoid X receptor alpha
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127729219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcaf03000
]
127729219
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
mcaf03310
]
127729219
Transcription factors [BR:
mcaf03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
127729219
Nuclear receptors [BR:
mcaf03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
127729219
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
127729219
NCBI-ProteinID:
XP_052092885
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All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MISDQENKCGLSIKCVDESTEKVNDISNMTNYYSLDSSVGSSVGMSSGGMPSQMGSMNSM
GGLDSPPDIKPDIGQLQMPGHNFFTGFPPGLQMPMPSTQPSPGSAPMQSPGLLSPSSSVT
SPSSMMSVGSPGSIGSPTNAFSTKHICAICGDRASGKHYGVYSCEGCKGFFKRTVRKDLT
YACRDDRNCIIDKRQRNRCQYCRYMKCLTMGMKREDVKSVAPPADNSGSSWGAVQEERQR
NKEKGEGEVESTSGANNDMPVEKILEAELAVDPNTDTYIDTQKDAVTNICQAADKQLITL
VEWAKRIPHFVELPLEDQVILLRAGWNELLIAAFSHRSTVVKDGILLATGLHVHRSSAHQ
AGVGTIFDRVLTELVAKMREMKMDKTEVGCLRAIVLYNPDAKGLTATHEVEQLREKVYAS
LEEYCKTRYPEEPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLESPT
NT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgatcaagagaataaatgtggcctatctatcaaatgtgttgatgagtctaca
gaaaaggtgaatgatatctcaaacatgacaaattactattcacttgacagcagtgttggg
agttctgttggaatgtcatcagggggcatgccttcccagatggggtccatgaactcaatg
ggtgggttagattctcctcctgatataaaaccagatattggacaactacagatgcctggt
cacaacttctttactggatttcctccaggtttacagatgccaatgccttccactcagcca
tcaccaggatctgctcccatgcagtcaccaggtttattgtcaccatcatcgtcagttact
tctccatcgtctatgatgtctgtaggctcacctggatccattggatctccaaccaatgct
ttttctactaaacatatatgtgctatatgtggagacagagcttctggaaaacattatgga
gtttatagttgtgaaggttgtaaaggatttttcaaaagaacagtgaggaaagatctgaca
tatgcctgccgagatgacagaaattgtatcatcgataaacgacagcgaaaccgatgtcag
tactgccgctacatgaaatgtttaaccatgggaatgaagcgagaagatgtgaaaagtgtt
gctcctcctgcagataacagcggatcatcatggggtgctgttcaggaagaaaggcaaaga
aataaagaaaaaggggagggagaagtagaaagtactagtggagctaacaatgatatgcca
gtagaaaagatcttagaggcagagctagccgttgatcccaatactgatacatatattgat
actcagaaagatgctgttaccaacatatgtcaggctgcagacaaacagctgattacatta
gtagaatgggccaagagaattccacactttgtagaactaccattggaggatcaagtgata
ctgctgagagctggctggaatgaattgttaatcgctgcattttcccaccgatctactgta
gttaaggatggtatattactggctacaggtttacatgtacatagaagtagtgctcaccag
gcgggagtaggaaccatatttgatagagtcctcacagaattagtggccaaaatgagagaa
atgaaaatggacaagacagaagttggctgtctaagggctatagtcctgtacaacccagat
gctaaaggacttactgctactcatgaagtggaacagttgcgtgagaaagtttatgcttca
ttggaggaatactgtaaaacccgatatccagaggaaccaggacgatttgccaagttactg
ctcagactacctgccttacgaagtattggactaaagtgcctggaacatttgtttttcttt
aaattgattggtgatacaccaatagacacgttcctaatggaaatgttagaaagcccaacg
aatacttga
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