Mytilus californianus (California mussel): 127730657
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Entry
127730657 CDS
T08804
Name
(RefSeq) probable histone deacetylase 1-B isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03082
ATP-dependent chromatin remodeling
mcaf03083
Polycomb repressive complex
mcaf04330
Notch signaling pathway
mcaf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127730657
03083 Polycomb repressive complex
127730657
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127730657
04350 TGF-beta signaling pathway
127730657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127730657
Enzymes [BR:
mcaf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
127730657
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
127730657
HDAC complexes
Sin3A-HDAC complex
127730657
BRAF-HDAC complex
127730657
REST complex
127730657
SHIP complex
127730657
MiDAC complex
127730657
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
127730657
Heterochromatin formation proteins
Other heterochromatin formation proteins
127730657
Chromatin remodeling factors
NuRD complex
127730657
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
127730657
NCBI-ProteinID:
XP_052095128
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MASQTHSKKRVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAT
QEEMTKFHSDDYIKFLRSIRPDNMSDYNKQMQRFNVGEDCPVFDGMYEFCQLSTGGSVAG
AVKLNKQAADIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYVDIDIHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDDSYESI
FKPVMTKVMEMYQPSAIVLQCGADSLSGDRLGCFNLTLKGHGKCVEFMKKWNLPLLLLGG
GGYTIRNVARCWTYETSLALGADVANELPYNDYFEYYGPDFKLNLSPSNMANQNTGEYLD
KIKTRLFENLRMLPHAPGVQMQAIPEDALNDESNEDEDKDNTDERISIRASDKRIACDED
FSDSEDEGEGSRKDKQNYKPKSKRPRTDDDKNNSSEKAETQEEKKEVKKETTETKEETKA
TQEKTEEKTELVDKKEKSPPAKSETPESAPKEDTVTKMDM
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcctcacaaactcacagcaagaaaagagtctgttattattacgatggagacattgga
aattactactatggccaaggtcatcctatgaagccacacagaatacgtatgacacacaac
cttatacttaactatggactgtataggaagatggaaatttatagaccacacaaagccaca
caagaagaaatgacaaaattccacagtgatgactatatcaagtttttacgaagtataaga
ccagataacatgtctgactacaacaaacagatgcagcgatttaatgttggagaagattgt
cctgtatttgatggaatgtatgaattctgtcagctgtcaactggtggctcagtagctggt
gcagtaaaattaaacaagcaagcagctgatattgctattaactgggctggtggacttcat
catgccaagaaatctgaagcttcaggcttttgttatgtcaatgatatcgtactggctatc
ttagaattacttaaatatcaccagcgtgttctatatgtagatattgatatacatcatggt
gatggtgtagaagaagcattttatactacagatagagtaatgactgtctcattccataaa
tacggggaatatttccctggtactggggacctcagggatataggtgcaggcaaagggaaa
tattatgctgtaaacttcccactcagagatggtatagatgatgattcatacgaatccata
tttaaaccagtgatgacaaaagtgatggagatgtaccaacctagtgcaattgtactgcaa
tgtggagctgattccctgtctggtgatagactgggatgttttaaccttacactgaaagga
catggaaagtgtgtagaatttatgaagaaatggaacctgcccttgttactcttaggaggc
ggaggttatactatcagaaacgtagccagatgttggacatatgagacatctttagcactt
ggtgcagatgtagcaaatgagttaccatataatgattactttgaatattatggaccagac
ttcaaattaaatctcagtccttcaaacatggctaaccagaacactggagaatatttagac
aaaatcaagacaagattgtttgaaaaccttaggatgttacctcatgctccaggtgtacaa
atgcaagcaattcctgaagacgctcttaatgatgaaagtaacgaagatgaagacaaagat
aacactgatgaaagaatttcaatccgagccagtgacaaaaggatagcttgtgatgaagat
ttctctgacagtgaagatgaaggtgaaggtagcagaaaagacaaacaaaattataaacct
aaatctaaacgtcccaggactgacgatgataaaaataactcgtccgagaaagcagagaca
caggaagaaaagaaggaagttaaaaaggaaacaacagagacaaaagaagagacaaaagca
acacaagaaaaaacggaagaaaaaacagaactggtggacaaaaaagaaaaatctccacca
gccaaatcagaaactcctgaatcagcacctaaagaagacactgttactaaaatggacatg
tga
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