Mytilus californianus (California mussel): 127731069
Help
Entry
127731069 CDS
T08804
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127731069
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127731069
Enzymes [BR:
mcaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
127731069
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
127731069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
AAA_22
AAA_10
TniB
AAA_16
ATP_bind_1
CbiA
ATPase_2
AAA_18
GTP_EFTU
nSTAND3
AAA_14
AAA_35
ABC_tran
Motif
Other DBs
NCBI-GeneID:
127731069
NCBI-ProteinID:
XP_052095879
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MSEEKKEEEYRLEKDQELRFEVEARATATLELLDGMAEIFGTELTKGKKYLFESCSKVAV
YTWHGCVVKLEGRTEVAYIAEGTPMTVYVNVHAALEQMRQKAEEERSRGPRVMVVGPTDV
GKSTLCRLLLNYAARLDRASVYVDLDVGQGEVSIPGTIGAAVVERPAEIEEGYSLNAPLV
FHYGHTSPSSNYPLFKMLVSRMAECVNKKTEKSKKCNVSGCIINTGGWIKGAGYDSLKHI
AGSFEVDVILVLGQERLYSELKRDMPDFVNVILLPKSGGVVERNQHQRSDSRDQRVREYF
YGPKKNGDDSFFPHPTEVSYNDIKLYKIGAPALPDSMLPLGMKKEDNKTKLVPLQPGTNI
LHHVFSVSTAKSIEDAVLECNVYGHVVISGIDPDKQTATVLSPSPEKLPSSILLLMDMQF
MDIDI
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaaagaaagaggaggaatataggttagaaaaagatcaggagcttagattt
gaagtagaagccagagctacagctactttagagcttcttgatggaatggcagaaatattt
ggtacagagctgacaaaaggaaagaaatatttatttgaatcttgttccaaagtagctgta
tatacatggcatggatgtgttgttaaattagaaggtagaacagaagttgcatacattgct
gaaggcactccaatgacagtttatgtgaatgtccatgcagcacttgaacaaatgagacaa
aaagcagaagaagaaagatcaagaggaccaagagtaatggttgttggtcctaccgatgtt
ggaaagagtactttatgtcgtctgttgttgaattatgcagcacgacttgatagggcatct
gtttatgttgatttagatgttggacagggagaagtgtccattccaggaaccataggtgca
gcagtcgtagaaagacctgcagagatagaagaaggctatagtctgaatgctccattagtt
tttcattatggtcatacaagtccatcatccaattaccccttgtttaaaatgttggtatca
agaatggctgaatgtgttaataaaaaaacagaaaaatcaaaaaagtgcaatgtaagtggt
tgtataattaacacaggaggttggataaaaggagcaggatatgattctcttaaacacatt
gctggatcatttgaagtggatgtaattctggtgttgggacaggagaggttatacagtgaa
ctgaaaagagatatgccagattttgttaatgttattcttttacccaaatctggtggtgtt
gtggaaagaaatcaacaccaaagaagtgattccagagaccaaagagtccgggaatatttt
tatggaccaaagaaaaatggagacgattcattcttccctcatccaacagaagtcagttat
aatgatattaaattatataaaattggagcacctgccttgccagactccatgctacctcta
ggaatgaagaaagaagataataaaaccaagctagtgcctttacaaccaggaactaatatt
ttacaccatgtgtttagtgtcagtactgctaaatcaatagaagatgcagtgttagagtgt
aatgtctatggccatgttgttatatcagggatagatccagataaacagacagcaacggta
ttatcaccttcaccagagaaacttccatcatcaatattacttctcatggacatgcagttt
atggatatagatatctaa
DBGET
integrated database retrieval system
