Mytilus californianus (California mussel): 127731843
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Entry
127731843 CDS
T08804
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mcaf01009
]
127731843
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127731843
Protein phosphatases and associated proteins [BR:
mcaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127731843
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
127731843
mRNA cycle factors
Stress granule specific factors
127731843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
127731843
NCBI-ProteinID:
XP_052096652
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MQHNMNSYPLQHNQGMPQPMPQRQQQNIIISGSQRNKGGMMGPGMTQQTPTILQHNPGLN
QPTILQQNPAAQYPTSLPPTSVMPPYQTTQHNTVPQKPTPPPVSQPNQNGIIHLKGGAAV
AAQNGTTLPSGEQQQQNQEEEEGKEDIQTETSETESLANTKEKTPMCLINELARYNKISH
QYTLDDEQGPAHKKTFYVTLKLGDNETYAENGPSIKKAQHSAAAVALEKTSYTHPPPKPP
KNRTTHEPGTITPTVELNALAMKRGEQTFYKPLDTRYPHYPQQNYNYRGVYNHRYHYPRM
PRVFYVSLKCGQREFIGEGHNRQEARNDAATKALNILKKLPVPNDDPKKSDTQTPEKQEP
SEKDLLKSEISLVHEIALRRNLNVIFDVIRESGPPHMKSFVTKCRVGEFETEAEGNSKKV
SKKKAAELMLDKLKELSPLPPMAQRPKNKQNQNKKKSKNIIKVQNQMQKTDPNYGVGINP
ISRLIQIQQAEQKKEPVFTLITERSLLRRREFVMQVQIEDKTCTGVGPNKKLAKRHAAEQ
MLTLLGYNKPSPQPTKPAIKTATTPEQTTGSAEKKVTFQEKPEPATPVSSTGPGEIANGK
SGRQLMPGLLLLRDSNYTSGTQNMYQAQPPMTEPLVFGAGHMRPELQLRDIATKSKLEIK
FDEFAGKNTEILCRVTLLTNPHQMFHGTGPNSDYAKDAAALEALKFLAELGREEIKMTGD
GPHMKTSDQLTNSTLGGAPGRVGPM
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacaacatgaactcatatccacttcaacataatcaaggcatgccacaaccaatg
ccacaaagacaacaacaaaacattataatttcaggaagtcaaagaaacaaagggggcatg
atgggacctggaatgacacaacagacaccaaccattctacagcataacccaggactgaac
cagccaactatcctccaacagaaccctgctgctcagtatcctacatcacttcctcccaca
tctgtcatgcctccttatcagacaacacaacacaatacagttccacagaaacctactccc
cctccagtttcacagcctaaccagaatgggatcatccatctgaaaggtggtgctgctgtt
gctgcacagaatggaacaaccctacctagtggtgagcagcaacagcagaaccaggaggaa
gaagagggaaaggaggacatacagacagaaacatcagagacagaatcattggcaaacaca
aaagagaaaaccccgatgtgtctcatcaatgaattggcccgttataacaagatctcccac
cagtacaccctggatgatgaacaaggaccagctcataagaagaccttctatgtaacactc
aaactaggagacaatgaaacctatgcagaaaatggacccagcattaaaaaggcccagcat
tcagctgctgctgtggccttagaaaagacctcttatactcaccctccacccaaaccacct
aaaaatagaactactcatgaacctggtactattactccaacagttgagctgaatgccttg
gcaatgaagcgtggagagcagaccttctataaaccacttgacactagatatcctcactat
ccacaacagaattacaactatagaggagtgtataatcatagatatcattatcccagaatg
ccaagagttttctatgtttcattgaaatgtggccagcgtgagtttataggggaaggacat
aatagacaggaagcaaggaatgacgctgccaccaaagctctcaacattctgaagaaacta
ccggttcctaacgatgatccaaagaaatctgatacacaaacacctgagaaacaggaacct
agtgagaaagacctactgaagtctgagataagtcttgttcatgaaatagctctgaggaga
aatcttaatgtcatctttgatgtcataagggaatctggaccaccacacatgaaaagtttt
gtaacaaaatgtcgagttggagaattcgaaacagaagctgagggaaacagtaaaaaagta
tcgaaaaagaaagctgccgaactaatgctggacaaactgaaggagttatctcccttacct
ccgatggcacagcgaccaaagaacaaacaaaatcagaacaagaagaaatcgaaaaacata
atcaaggttcaaaatcaaatgcagaagacagatcctaattatggagtagggattaacccc
atcagtagactgattcagattcaacaggcagaacagaaaaaggaaccagtcttcacatta
atcacagagagaagtcttcttaggagaagggaatttgttatgcaggtacaaatagaggac
aagacctgtactggtgtgggacccaataaaaagttagccaagcgacatgcagccgaacag
atgctcacgttgcttggttacaacaagccatcgccacaaccgaccaaacctgccatcaaa
acagctacaacacctgagcaaacaacaggatcagcagaaaagaaagttaccttccaagaa
aagccagagcctgccactccagtaagcagcactggtccaggagaaatagctaacggtaaa
agtggacgacagttaatgccaggacttttgctactgagagattctaattatacgtccgga
actcaaaatatgtatcaagctcaaccaccaatgacagaacctttagtatttggtgcagga
cacatgagaccagaattacaactgagagatattgctactaaaagtaaactagaaattaaa
tttgatgaatttgcaggcaagaacacagagattttatgtcgagtgactttgcttacaaat
cctcatcagatgttccacggtacaggcccaaactcagattatgctaaagatgctgcagca
ttggaggctctcaaattcttggctgagcttggcagggaagaaataaaaatgacaggagac
ggcccacatatgaagaccagtgatcaacttaccaactcaacactcggtggtgcccctggt
cgggttggcccgatgtag
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