Mytilus californianus (California mussel): 127732185
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Entry
127732185 CDS
T08804
Name
(RefSeq) NPC intracellular cholesterol transporter 1-like
KO
K12385
Niemann-Pick C1 protein
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
127732185
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
127732185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcaf02000
]
127732185
Transporters [BR:
mcaf02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
127732185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
127732185
NCBI-ProteinID:
XP_052097211
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MKMKKDLLLFFISVVLSSYMVHGKDGHCSWYGECGDSPTGRYNCLYTGPAKVLNNETGLK
ILKTYCPDLLEENGDTYTCCDTDQLITIQKNMGLPQQFFLRCPSCYRNFLNLYCYQTCSN
NQSNYVYNVKTEPMPTNETKTQITKIDYFITHTYANGMFNSCKGVQMPSANERAITVFCG
HPADQCTIKNWLQYMGDTTNGHTPFDINFNITNTPVTPNTTNMTFYPMDVTTSLCNETAL
NKSACSCQDCTLSCAPMPPFPKPPKPATILGFDAWYFIMCILYIIFVLFFGTYGLCYNII
SRNAFGIKQKRYNSIEERPPGRTGSINGHGQSRMKKLSAPLVQEKDINCLEKIGAGVEKF
LRNMFLTWGLFVARHPVIVIVLGVLIAGALSAGLYFFKVTTNPVDLWSAKNSRARTEKDY
FDSHFGPFYRTEQLIVTRPNNDTIVKHKNPGSLVSYTNYTSLFDKEFLHMLLDLQLEIEN
LTATYKGETVRLQDICFKPLAPDNNNCTTESVLEYWQKSHENIDKLAYTPDRWFVKADYL
DHFHFCVSAPASTQDTVGLNISCLATNSAPIFPWVAMGGYEGLNYQDSTAFVITILVNNH
LKDEDNEKAMAWEKVLIDFMKTRQNDLNMTIAFNTERSIEDEINRESSSDIWTVLASYLI
MFGYITITLGQYGTCENPQKLLIDSKITLGLSGVTIVLLSVAASLGTYSYFGIPATLIII
EVVPFLVLAVGVDNIFILVQAYQRDTRPPGESLEEQIGRIVGRVGPSMLLTSSAESIAFF
LGALTNMPAVRVFSLYAALAVLIDFLLQITVFIALMTIDAKRQEDDRFDACCCIKEPGSK
KEKHEGWLFYLFKNFYAPFILKEYVRPIVVLVFTAYFFISVAVLHKIGLGLDQKLSMPDD
SYVLRYFGNESTYLHVGAPVYFVVREGHDYTTMQGQNALCGGNGCPQDSLVGQLYTASKL
ANYTYIAQPTSSWIDDFFDWLAPGGSPPCCRLFPNGTFCPATVVDKTCTACPVHKKPDGR
PTPQDFMKYLPIYLKDNPGTKCAKGGHAAYGSGVNLIRNKTQVGATYFMTYHTILRTNED
FIGALREARKIGENITNTITTKTSNATVFPYSIFYVYYEQYLTVVHDTIFNIALCMVAIF
VVTFILIGFDFFSAIMIVLVVSMIVIDICGMMYFWDITLNAVSLVNLVMAVGIAVEFCAH
IVRAFAVSLQPTKLMRAEEALAHMGSSVLSGITLTKLGGIIVLAFSKSQLFQVFYFRMYL
GMVLYGATHGLIFLPVLLSYIGPPINKAKLYDAQQRRKHLSADSDNDDINSSRQNLVSDS
GAPPDYNTLADPAL
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaagaaagatttgttactattctttatatctgtggtgttaagcagttatatg
gttcatgggaaagatggacattgttcatggtatggtgaatgtggtgactcaccgacgggg
agatacaactgcttgtatacagggccagccaaagttttaaacaacgagacaggattaaaa
attctcaagacttattgtccagatttacttgaggaaaatggcgatacttacacatgctgt
gacacagatcagttgataactattcagaagaatatgggactgccacaacagttcttccta
cgatgtccctcctgttaccgtaactttctcaacttatactgttaccagacttgctcaaat
aaccagagcaattatgtatacaacgtgaaaacagaaccaatgcctaccaatgaaaccaaa
acacaaattacaaaaatagactatttcattacacacacttatgctaacggtatgtttaat
tcctgtaagggagttcagatgccaagtgctaatgaacgagcgatcacggttttctgtggc
catcctgctgatcagtgcactattaagaactggctacaatacatgggagatacaactaat
ggacacaccccttttgatatcaacttcaatatcaccaatacaccagtaactccaaataca
acaaatatgacattttatcccatggatgtcactacttctctttgtaatgaaactgctctc
aacaagtctgcttgtagttgtcaagattgtacccttagctgtgctccgatgccacctttc
ccaaaacctccgaaaccagcgaccatattgggcttcgacgcctggtactttatcatgtgt
atattgtatataattttcgtattgttttttggaacatacggattatgttacaatatcata
tctcggaatgcttttggaatcaaacaaaaaagatataatagtatagaagaaagacctcct
ggtagaactggaagtataaatggccatggacaatcaaggatgaaaaaattgtcagcgcca
cttgtccaggaaaaggatattaactgtttagaaaaaatcggagctggcgttgagaaattt
ttgaggaacatgtttctaacatgggggttatttgtagcacgacatcctgtaatcgtaatt
gtacttggcgtactcatcgctggagctttgtcggcaggactatactttttcaaggtcaca
accaacccagtagatctttggtctgctaagaacagcagggcacgcacagagaaggattac
ttcgattcccatttcgggccattctacagaactgaacaactgattgtgaccagaccaaac
aatgataccatagttaaacataagaatccaggatcccttgtctcatataccaactatact
tctttgtttgataaggagtttttacatatgctattggatcttcaacttgaaatagaaaac
ttaacagcgacctacaaaggggaaacggttcgactacaagatatttgtttcaagccactc
gctccagacaataacaactgtacaacagagagtgtgttagaatactggcagaaaagtcat
gaaaatattgacaaattagcatatactccagatagatggtttgtcaaggcagattacctt
gatcatttccatttctgtgtcagtgccccagcatctacacaagatacagttggactgaat
atttcatgtctggccactaattcagctcctatatttccatgggttgccatgggaggatat
gagggtttaaattaccaagactcaacagcgtttgtcatcacaattctggtcaacaaccac
cttaaagatgaagacaatgaaaaagctatggcgtgggagaaagtgcttatagatttcatg
aagaccagacaaaatgatttgaacatgacgattgcctttaacacggagcgatcaattgaa
gatgaaataaacagggaaagtagctctgatatttggacagttttggctagctacctgatt
atgtttgggtacattacaattactcttgggcagtatggaacgtgtgaaaatccacaaaaa
ctactgattgattccaagataacattaggactatcaggagttaccattgtactattatca
gtagctgcctcccttgggacctatagttactttggaataccagcaacacttatcatcata
gaagttgtaccattcttagtcctggctgttggtgtggacaacatctttattttagtccag
gcctatcagcgagataccagaccaccaggtgaaagtttagaagaacagataggcagaatt
gtaggaagagtggggccaagcatgttacttactagttctgcagaatccatagctttcttc
ctgggtgccctgacaaacatgcctgcagtaagagttttttccctatatgctgccctggca
gttttaattgactttttgctacagattacagtatttattgcattaatgacaattgatgcc
aaaagacaagaggatgatagatttgacgcatgttgctgtattaaagaaccaggaagtaag
aaggagaaacatgaaggctggctcttctatttattcaagaatttctatgcaccatttatc
ctgaaggaatatgttagaccgatagtggtacttgtgtttacagcctatttctttattagc
gtagcagtattacataaaattggattaggattggaccagaaactctccatgcctgatgac
tcttatgtattgagatattttggaaatgaatctacatacctccatgtcggtgcacctgtg
tactttgttgtgagagaaggacacgattacacaacaatgcaaggacagaatgctctgtgt
gggggcaatggatgtcctcaagactcactggttggtcagctctacactgccagtaaatta
gctaactatacatatatagcccagcctacttcttcctggatagatgatttctttgattgg
ttggctccaggaggaagtcctccctgttgtagactgttccctaatggtactttctgtcct
gctacagtagttgacaaaacctgtacagcttgtcctgtgcacaaaaaacctgatggaaga
cccactccacaagatttcatgaaatatctaccaatttacttgaaggataatccagggacc
aaatgtgctaaaggaggtcatgctgcatatggaagtggagttaatttgattcgcaacaaa
acacaagtaggagcaacctattttatgacctaccacactatactgaggacgaatgaggac
ttcattggagctttgcgtgaagctaggaagataggagaaaatataacaaacaccatcact
actaaaacttctaatgcaactgtattcccatacagtattttctatgtatactacgagcag
tacctgacagttgtacacgataccatatttaacatcgctttgtgtatggtagccatcttt
gttgtcacctttatcctgattggattcgactttttctctgccataatgattgttcttgtg
gtatccatgattgttattgatatatgtggcatgatgtacttctgggatattacacttaat
gctgtttcattggtcaatcttgtgatggctgttggtatagctgttgaattttgtgctcat
atagtccgagcttttgctgtgagtttacagccaaccaaactaatgagagcagaggaagct
cttgcacatatgggaagctctgtacttagtggtataacattaactaagttgggaggaatt
attgttttagctttttctaagtcccagcttttccaagtattttacttcagaatgtatctt
ggaatggtattgtatggtgctacacatggtcttatattcttgccagtgttactcagttat
ataggtccaccaataaataaagccaaactttatgatgctcaacaaagaagaaaacatttg
tctgcagactcagacaatgatgacattaattcttctcgacagaatcttgtgagtgatagt
ggtgctccgccagattataacaccttagctgatccagcactgtga
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