Mytilus californianus (California mussel): 127733012
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Entry
127733012 CDS
T08804
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcaf03021
]
127733012
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127733012
Transcription machinery [BR:
mcaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
127733012
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
127733012
SLIK complex
127733012
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
HDA2-3
ResIII
Myb_DNA-binding
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
127733012
NCBI-ProteinID:
XP_052098219
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MDKGDLDDDFSKPLFGRPDKSSKLTYSSESGEDKSASGSGNNSSESGSESGSGSSKSDSS
SESGSSSESNSKSESESDNHNGHNDRQDVPMPYDTDSQQSSPGKRGRPHRQSNTELKEIL
RENPDLFGLRRSGRQRQEPVRYNAQDSDEESEPRSRKGRRRKNSGDWNESGGSNESSSGS
EDYHPPRAVQSRPVRRAVKGRRSGKSGKTKSAGRPKTGHLSDSDSWSEDDARKFETRNAS
KKVRQKPRYRSYRRKQSRRGVCYKEESDDVTDSDDIVEVAQEEEDAEAENRETVERVYKT
RMGKKLATGSRTTIYNVLENGDPNDGCDPSINEVEQQFLIKWKNWANIHNTWETYENLKE
QKVNGLKKLENYLKNLNEINDWKRAASPEDVEYYELQKEMMEDLYEQYINAERIIAHSNQ
KMANENNGYPDYFVKWQGLPYSDCTWEDGELLARRFQSVIDEYHARNKSQKTPSKLTKCL
KYRPKYQPFKDQPSCIGGVDNLDLRDYQLEGVNWLMHAWSKYNSSILADEMGLGKTIQTI
SFLQIMYTYYQLYGPFLIVVPLSTLVAWQREFRNWGPEMNVVTYLGDISSRNMIREYEWQ
HGGNKRLKFNVILTTYEILLKDKSFLGGVSWAALMVDEAHRLKNDDSLLYKSLFEFNTNH
RLLITGTPLQNSLKELWALLHFIMPQKFDNWPDFEEKYSSQEKMGFAGLHKQLEPYLLRR
VKKDVEKSLPSKTEQILRVEMSSLQKQYYKWILTKNYKALSKGLKGNASSFVNIIMELKK
CCNHTSLTRPPEDENMDKLTALIKGSGKLILLDKLLTRLKETGHRVLIFSQMVRMLDILS
DYLQLKRYAFQRLDGGIRSDIRKQALDHFNAEGSSDFCFLLSTRAGGLGVNLATADTVII
FDSDWNPQNDLQAQARAHRIGQKKQVSVYRLVTKNSVEEDIVERAKRKMVLDHLIIQRMD
TTGRTVLNKNQVPSSTSTPFKKEELAAILKFGAEELFKEDEENEEEPQVDIDDILNRAET
RESEQPMLGDELLSQFKVVSFDNLEEDDPPPSVKVEEDTGKEWDSIIPENDRRKIEEEEE
QKRLLELNLPPRSRKTVKQIQVDYDSDEKKKKKKKKDDDEEDEDDESEDEEEDEDEPKKR
GRPPGGSKGKVRGFTDAEIRRFIKSFKKFGRPLTRLDAIACDAELQEKSEGDLKKLAQIL
MSGCEQSLDEHNHNKVKNEEEASVDGMNTPAKKKREKGPSFNISGVVVAVQPVMKAMQDL
EQLDDLIPKNREEKKRFKIDTHVKVCHWDCEWSEEDDCSLLKGVYEYGMGNWEAIKMDPD
FNLHDKILPGGKNEKPQAKHLHTRVEYLLKMLSKKSDADKPAPVKNNSEAKPRKKRKPKS
KAEVIEKESSDSDNSAKVKSSARDDSTMDSFPENYKKKKEKVEPKDHQIEVETKVKSKSG
EKPKKEKKKKKKPKKEDGPMHFTANTTPVAVASEDFDVELPDEVFRKCKEMMRPVKRALR
KLDNPDEGMSEKDQVVHTKQCLLRIGDRITECLSTLNDPEKIKTWRGHLWNFVSKFTEFD
ARKLHKLYKHAYRKREEEKEREEAKAHTQNHNTSHQDKHKPHKHQGESDHNKHSHNHDQG
RDFTKHSTANNRHPPGSNMSNRGRDHRPEHSSSPWQHASPLQRADDPPPSRYGDKGGSYR
RSDNYQRYGGGDHSHHRFNHDRREYGSGNHYSREHRPGPSYDHDPNYRNNHPEYRERGQD
FHHRSDYGQFGHRDYGNSGYNRSSHDSYSQFHPERKRKSDLQDPRIHKDPRLEGHGYPES
GYSESSNDSQLKH
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atggataagggtgatcttgatgatgactttagtaaacctttgtttggaagacctgataaa
agttcaaagctgacttacagctctgagtctggagaagacaaaagtgcttctggatctgga
aacaattcaagtgaatcaggttcagagtctggatctggctccagtaaatctgactcctca
tcggaatcaggaagtagttctgagagtaattctaaatctgagagtgaatcagacaatcac
aatgggcataatgatagacaagatgtccctatgccttacgatactgactctcagcagagt
agtcctgggaaaagaggaaggcctcatcgacagagcaacactgaacttaaagaaatctta
agagaaaatcctgatttgtttggtctacgtagatctggtagacagaggcaggaaccagtg
cgatacaatgcacaggactctgatgaggagagtgagcctagaagccggaaagggagaagg
aggaaaaattctggtgattggaatgagagtggcggtagtaatgaaagcagtagtggaagt
gaagattatcatcctccaagagccgttcagtctagaccagttagaagagcagtaaaggga
agacgttctggtaaatctgggaagacaaaatctgcaggaagacccaagacaggacatctg
tctgattctgattcgtggagtgaggatgatgctaggaaatttgagaccagaaacgcctcc
aagaaagtcaggcaaaagcctcgttatagatcttataggaggaaacagtccaggagaggg
gtctgttacaaggaagaatcggacgatgtgacagattctgatgatattgtagaagttgca
caagaagaagaggatgctgaagctgaaaatagagagactgttgaaagagtttataaaaca
agaatgggaaagaaattagcaactggaagcagaacaaccatatacaatgtattggagaat
ggtgatccaaatgatggctgtgatcctagcatcaatgaagttgaacagcagtttcttatc
aaatggaagaactgggcaaatattcacaatacttgggaaacttatgaaaatctcaaagaa
caaaaagttaatggattgaagaaattagaaaattatctgaaaaatttaaatgaaatcaat
gattggaagagagcagcttctcctgaggacgtagaatattatgaactacagaaggaaatg
atggaagatttatatgaacaatacattaatgcagagagaatcattgctcattccaatcag
aaaatggccaatgagaacaatggttaccctgactactttgtgaaatggcaggggttacca
tactcagactgtacatgggaggatggtgaactattggctcgtagatttcaatccgttatt
gatgaatatcatgccagaaacaagtctcagaaaactccatcaaagttaaccaaatgttta
aagtacagaccaaagtatcagccatttaaagaccagccatcatgtattggtggagtggat
aatttagatttacgagattatcaattagaaggagttaattggttgatgcatgcttggtca
aagtataattcttccatattagcagatgaaatgggactagggaaaactattcagaccata
tcatttctacagataatgtatacttattatcagttgtatggacctttcttaatagtagta
cctttgtctacattagtggcatggcaaagagagttcagaaattggggaccggagatgaat
gtggtcacttaccttggagatatttctagtcgtaatatgataagagagtacgaatggcag
catggtggaaataaacggttaaagttcaatgttatccttacaacgtatgaaatcttactt
aaagacaagtcatttttaggaggggtttcatgggctgcattgatggtagatgaagcccac
agactgaagaatgatgattcacttctttataaatctttgtttgaatttaacacaaaccac
cgacttctcatcactggtacccctttacagaactcactgaaagagctgtgggctctgctc
catttcattatgcctcaaaaatttgataattggccagattttgaagagaaatattcatcg
caagaaaaaatgggatttgcaggacttcacaaacaactagaaccttacctgttacgtaga
gtcaagaaagatgttgagaaatctctcccttcaaagacggaacaaattcttagagttgaa
atgtcttctttacagaaacagtattacaaatggattttaacaaaaaactataaagcactt
agtaaaggactgaaaggaaatgcgtctagttttgtaaatatcataatggaacttaaaaaa
tgttgtaatcacacatcactgactcgtccacctgaagatgaaaacatggacaaactcaca
gcgttaataaaaggaagtgggaaattaattctgttagacaaattattgacacgtctgaaa
gagacaggacatagagtgctaatattttctcagatggttaggatgttggatattcttagt
gattatttacaattgaaacgttatgctttccagaggttggatggagggataagaagtgac
ataaggaagcaggccctggaccactttaatgctgagggatcatcggatttttgtttcttg
ttgtcaacaagagctggcggtcttggggtaaatttggcaactgctgatactgtgataata
tttgatagtgattggaacccacagaatgacctacaagctcaagctagagctcatcgtata
gggcagaaaaaacaggttagtgtatataggttagtgacaaagaacagtgtagaagaggat
attgtggaaagagctaaacgtaaaatggtgctagatcatctgatcatacagagaatggac
actactggtaggactgtgctgaacaaaaatcaggtcccatccagtacgtcaacgcccttc
aaaaaagaagaattggcagctatattgaagtttggtgctgaagaattgttcaaggaagac
gaggaaaacgaagaggaacctcaggtggacattgatgacatccttaaccgtgctgaaacg
agagaatcggaacaacctatgttgggagatgaactactgtctcagtttaaggtggtcagt
tttgataatcttgaagaagatgacccaccacctagtgtaaaggtagaagaagatacaggt
aaagagtgggactcgattattcctgaaaatgacagaaggaaaattgaagaagaagaagag
caaaaaagacttctggaattaaatttacccccaagaagcaggaaaactgttaaacagatt
caggtggattatgattctgatgagaagaaaaagaagaagaaaaaaaaggatgacgatgaa
gaagatgaagatgatgaaagtgaggatgaggaggaggatgaagacgaaccaaagaaacgt
ggaaggcctccaggtggcagtaagggaaaagtcagagggttcactgatgctgaaattaga
agatttatcaaaagttttaaaaagtttggtagacctttgactagacttgatgctatagcc
tgtgatgcagaattacaagagaaatctgaaggagatctgaaaaagttggcacagatattg
atgtctggttgtgaacaaagtctagacgaacacaatcacaataaagttaaaaatgaagaa
gaggctagtgttgatggaatgaatactccagccaagaagaaaagagaaaaaggaccatca
tttaatatatcgggtgttgtggtggctgtacagcctgtcatgaaagcaatgcaagatctg
gaacaattggatgatcttatacctaaaaatagagaggaaaagaaaaggtttaaaatagac
acccatgtaaaagtttgtcattgggattgtgaatggagcgaggaagatgactgtagcttg
ctgaaaggagtatatgagtatggcatgggaaactgggaagccatcaaaatggatcccgat
tttaacctacatgacaagattttgccaggtggtaagaatgagaagccacaagccaaacat
ttacatactcgtgtggaatatttactcaagatgcttagtaagaaatcagatgctgataaa
cctgctccggtgaagaataattctgaagcaaaaccaagaaagaaaagaaagccaaaatca
aaagcagaagttattgaaaaagagtcctccgactcggacaatagtgctaaagtaaagtct
agtgctagagatgacagtactatggatagtttcccagaaaattacaagaaaaagaaggag
aaagtagaacccaaagatcatcagattgaagtggaaacaaaagtgaaaagtaaatcagga
gaaaaaccaaagaaagaaaagaagaaaaagaagaaacctaagaaggaagatggtccaatg
cattttactgccaacacaacccctgtggctgtggcctctgaagattttgatgttgaactt
cctgatgaagtgtttagaaagtgtaaagagatgatgagaccagttaagagagcactgcgg
aagttagacaatccagacgaggggatgtcagagaaggatcaagtagttcatactaaacaa
tgcctgttaaggattggtgacagaattacagaatgtctgtcaaccttgaatgatccggaa
aaaatcaagacatggagaggccatttatggaactttgtatcaaagtttacagaatttgat
gcaagaaagttgcacaaattgtacaaacatgcatacagaaagagagaagaggagaaggaa
agagaagaggccaaagcacacacccagaatcataacacatcacatcaagataaacataaa
ccacacaagcatcaaggagaatcagatcataacaaacattctcataaccatgatcagggt
agagatttcactaaacattccactgcaaataatcgtcatcctcctggtagtaacatgtcc
aacaggggacgtgaccaccgtccagaacattcatctagtccatggcagcatgccagccca
ttacagagagctgacgaccctcctcccagcaggtatggagataaaggaggatcatacaga
agatcagacaactaccaaagatatggtgggggagatcattctcatcacagatttaatcat
gatcgacgagagtatgggtctggtaaccactattctagagaacacagaccaggacccagc
tatgatcatgatcctaattacaggaacaaccatcctgagtatcgagagcgtggacaggac
tttcatcatagatctgactatggacagtttggtcatagggattatgggaactccgggtat
aacaggtcatctcatgatagttattcacagtttcatccagagagaaaaaggaaaagtgat
ttacaagatccacgtattcacaaggatccacgtctggaaggacatggatatccggaatct
ggatattcagaatctagtaatgacagtcaattgaaacattga
DBGET
integrated database retrieval system
