Mytilus californianus (California mussel): 127733431
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Entry
127733431 CDS
T08804
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03440
Homologous recombination
mcaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127733431
03460 Fanconi anemia pathway
127733431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127733431
03036 Chromosome and associated proteins [BR:
mcaf03036
]
127733431
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127733431
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127733431
Chromosome and associated proteins [BR:
mcaf03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127733431
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127733431
FA (Fanconi anemia) pathway
Downstream FA components
127733431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCA2
BRCA-2_helical
BRCA-2_OB1
BRCA-2_OB3
BRCA2DBD_OB2
Tower
CS_DNAAF11_C
Motif
Other DBs
NCBI-GeneID:
127733431
NCBI-ProteinID:
XP_052098756
LinkDB
All DBs
Position
Unknown
AA seq
3137 aa
AA seq
DB search
MSQDLYLRKGNRFETGDGQGFESQTSQDTYSVSEKRHRFKFEAGHRFDSYTNNIITMTTK
KPKTCSVHTDLGKTPVIIPTNKTYIKDIAKLENEVGKGNPNWFVEASRNPREQDSSVTPI
SQKSNIQDSYNEGCPLYNSSNLLESQFSATSRLTGWMPPILGISPVNGTAQQYEGSQYDL
VKSLGVNDSTLSWTSSLATPNHADLEDRESQTPAQAKRKGFSRMLFSPGNNMTSETMEVC
TLNDSPVTKVSSKLSKENNDSDHSTEIIVNSYISSLEKNNGKVDIPDLTDALSDFFDPPS
KAAGRRRSAPSYRRNSIKTKPANSVGSISFTQGDSDKNNIIEDLFRTKDQHLNECPTKPN
KETNENSIQITEKFDHCESVRQKSVDSEKFVSSVSKSQQCKEKSLENEEQSMLRNEQECL
HENVENSIKPEEFSQTDLFCSTPYDGDRTYKSILSTAKRKTPASKKRVRFDKDLDENIIN
YIGTNSTTGNSEGKIRKTSNEFSADATFEIETENARMENNAKGNDKETDDLFSQVSPTVL
QEMCSVSSDKLEESPFTRKSTASVDTLIRSDISDQTGSIPISPVVQINNTIPVVEDKILP
INNVSETENLNCAINSLEKTVPVETKSNIKTDSLLKKPGKMKRFFYPTNSQINTSCPKSV
YGFKQQPNETANNNIKDNNENTVIEPSDNTNADSRTDTTPTIHIEVVKTGLTNYTPTLSS
GNIDSRTRSSGSGFKRYSDLVEVSQKASVENVNTASSNIYKRVSRTTNDTCSTPTSTRRD
SIEIKRKRLCLNQQDFNENCSSEKTVKELTSPKFPYEKTSNPISSAAASAIKLDIPYPES
DIFEDDLPDDSFSKEINIDGTLENLSGNSDYKENMFGTSENLSGNLRKSEKSDNFEKIRE
EGMQAITPKALKNNFKEQYKQNEEIFRKDTTNNKSNKQSENIRGEMFQGFNTAAGSKINI
TDSKLFEAEKLMVVDSSDFTGEFTDDFIVDRKLEVKNRTEFEKVKLQGDTMLMKREASPV
PGIETKVLDVKIENTGNYVNKISGLNKNREINLSGDRNFEKRLNYTPAVDVNSSVLGEHL
QPLSKQLTSLSSEKNANKDITIPEFEIKTELQESHAFSGGFSTASGTDIKCSTANLTKAQ
KLMDITDNVEDKEDTNKSLSSKYINNGFASASGKKLPMSLSSLSKAEKLMEDMKDDEDKA
GVSNVSCVNNIVGFSTAGGKSFKISPSSLSKATALISDSENIQHVSEVNLRINLIQTKTE
KIHCHGFSTASGKQFNISALSLSKAKSLMKESQEPFGGDQSDVIENNEVKETGFSTATGK
TFNLSKSSLLKAENIMDGKECQLVAPESALQSNTDTGQSNGLMSGFSSASGKGLNISTAS
ISKATCLMKEIDDKQEHSAPDTESKKEEFEEIFSKILKQSKSNNVLNVDVTNKSLRVESD
LEKELENMLTNKQNKKENIPVQPAKSTRFPPGSNVPKGFRPFKPPKIISKPKVVQNKKSV
TTQSAPEVDCTKEDILIKTDMAEPLKLEPESEDNYCGHTSDPIKQNNNNNIDSTYLDEVF
SEELLPSQKFSPESGRPVKKCRREESTSSVTSDDLELIEAEKSIELTTYTKLEPLQTNES
KNATFSLGTGGDNKRTRIENSECEIDIDFKGDNSQFALEEVMDPGNEFTQVLIETDKDRV
DEALLNCEVFIKEKRIKAENLVQPMKSNSNTATNSTLDFIPQITSTSAFVNEKVEMNVDP
DITFNFKNQNPFQSASGKTVFVSEKALQHARQTINNENTKNIEGLGDSFPHPRKSMESNI
CNPFQSASGKTVTVSQKALVHARKTLDDENIGLFHSASGKSVEVSEKALQHASKTLDNSS
SIQSVSGKGISVLPKSLQHARQTLIDDNSNPFQSASGKIVQISEAALKHEEIITPVHVLK
DDELRRETLKDISDNPFQSASGKNVLVSEKALCHARNSLNEETTNPFQSASGKSVEISEK
ALQEARKTLNEEMTNPFQSASGKSVEISEKALQQVRKTLNEEINDPSVKNYSVSEKNLQQ
TRNTLNNQTNNPFQSASGKGVSISEKSLQQAKKTSNDQNLNPFQSASGKSMIVSEQSLKH
ARKTLCDESINTSKCVSGNSEVNSEKAIQQDRKLLGQNYSEHCVSGNSEVMSGKALQKDR
KSYGQNYSVQCVPISKKVLPFSDNNFNKKLSPSLQASRSAVEIKKRKRSDFDDDFDIPLE
ILEQMELYGKRQRTDVLDGRRKQSLTAGPEDYSRDRQVPGFSPKPLKSQSIHTNQRNRIQ
EYLSGDTSKDTIALPKSTFKTPYKPSSAPIEDITATYNNKLKVGAPVFVPKTANSQGKKT
NDQQTRVPLQPKMPNNIKVESQSGVPGKGLNLTSAMNEISKEILQMIENARKQQKEKIKE
KKRRKVVPVEGRLYQMKQSHGRFKLKDVVTLNSNIDQSAIMHIHPSTRKVRCSNAALHKF
YLPDFYGKNVHHIIVGDGAMLVPDDKGYAGKEEFYQAFLTIENVDCKLLDEKWFCNHFRW
VVWKLAAYEVTSSWIFPGRCLTPEVVMLQMKYRYDREIDKCQRSAIMKICERDDTPCKRM
VLCISDITMDVKEPKISLTDGWYCIKARVDIPLSNLINKGCIHIGHKLCISGAELTGSQD
ACPPLEAPESLIMKISTNSTRPASWDSTLGYQTDHTPLCVPLSSVQGEGGLIGCIDVVVV
RKYPTMYMEKLPAGGCIFRSYAAEEKYKQTFQQLQQEKMEKLYQQLESRFEKDNKEERCI
KRKKFSCKDIEQLSSGEEIYEAINSAKHPDDIQTYLSSNQLELLMEYQRCIQEERRQKMN
SEFQKIWNDGDETNKQRNVIPLMKVRLVGCCRKDTDSQMSSLLSIWRPSSTHNDLKEGQR
YKIYSLSASPGRSGSGGVQLTATKQTQFKLLALDDNILDMIYEPREVLTKQDIVRKRPAY
REVDILGIVVMVNSTNFEHSGKQQDTVYLTDINDDLIGIKFWGGVKHCGLSDTLQEGVIC
CCSNLCDKSNYPSISLPILDYSTELSVLSQSPQYPSQRKHIENLKEKLKEKTEFLKQAKE
RLHDKLNARSSLASVIKSPEKNCSEILLESKTPNNPKTSSKMAALLSYSSPSPISPVVLS
SSKSIHKAFKPPSLTRK
NT seq
9414 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggacttgtatttgaggaaaggaaacagatttgagactggagatggccaggga
tttgagagtcaaacatcacaggacacatacagtgtatctgagaaaagacacagatttaaa
tttgaggctggacatagatttgactcttacacaaacaatataataaccatgacaaccaag
aagccaaagacttgctctgtacatacagatttagggaagacaccagtcattataccgaca
aacaagacttatataaaagatatagccaaattagagaacgaagtgggaaaaggaaatcca
aattggtttgtagaagcatctcgtaatccaagagagcaagattcttcagtgacacccatc
tcacaaaagtctaatatacaagattcctacaatgaaggctgtccattatataattcctca
aatctgttagaatctcaattctctgctaccagtcgtttgacaggttggatgccacctata
cttggaataagccctgtgaatggtacagcacagcagtatgaaggctctcagtatgattta
gtaaagagccttggtgtaaatgattcaactctcagctggactagttcattagctacacca
aatcatgctgatttggaggacagagaaagtcagactccagctcaagccaaaaggaaggga
ttttctcgcatgttattttctcctggaaacaacatgacaagtgaaaccatggaagtatgt
accctaaatgattctccagtaactaaagtcagttccaaattatcaaaggaaaacaatgat
tcagatcattctactgaaataatagttaattcctacattagcagtctagagaaaaacaat
ggaaaagtagatatacctgatttaactgatgctctgtccgatttctttgatcctccatct
aaagctgcaggtaggaggaggagtgcaccatcttataggagaaattccattaaaactaaa
ccagcaaactctgtaggttcaatatcttttactcagggtgattcagacaaaaataatatc
attgaagacctttttagaactaaagatcaacatttaaatgaatgtccaacaaaaccaaat
aaagaaactaatgaaaatagcattcaaattacagagaaatttgatcattgtgaaagtgtt
agacaaaaaagtgttgattcagaaaagtttgtctcttctgtttcaaaatcccaacaatgc
aaagaaaagtctcttgaaaatgaagagcaaagtatgctgagaaatgaacaggaatgtttg
catgaaaatgtagaaaattcaattaaacctgaagaatttagtcagacagatctgttttgc
tctacgccctatgatggcgataggacttataagtcaattctatcaactgcaaaaaggaaa
acacctgcatccaaaaaacgtgtaagatttgacaaagatttggatgaaaacataatcaat
tatataggtacaaattcaacaactggaaattctgaagggaaaattcgaaaaacttctaac
gaattttcggctgatgccacttttgaaattgaaactgaaaatgctaggatggaaaataat
gctaagggaaatgataaagaaactgatgatttgttttctcaagtttctccaacagtctta
caagaaatgtgttcagtttcatcagacaaacttgaagaatcaccttttacacgaaaatct
actgcatctgttgatactcttatcagatctgatataagtgatcagacaggatctatacca
atatctcctgttgtacagatcaataataccattcctgtagtagaggataaaatactgcct
attaacaatgtttcagaaacagagaatttgaattgtgccataaactctcttgaaaaaact
gtacctgttgaaactaagtctaatattaagactgatagtctattaaagaaacctggtaaa
atgaaaagatttttctatccaactaattctcaaatcaacacatcatgtccaaagtctgtt
tatggattcaaacaacaaccaaatgaaacagctaacaacaacattaaagataacaatgag
aatacagtaattgaaccatcagataatactaatgctgacagtagaacagacacgacacca
acaatccacatagaggtggtgaagactggtctaacaaattacactccaactttgtcatct
ggtaatattgattcaagaacaagatcttcaggttcaggttttaaaagatacagtgattta
gttgaagtatcacagaaagcaagtgtagagaatgtgaacacagcaagttcaaacatttac
aaaagggtttcaaggacaaccaacgacacttgcagtactccaacatctaccaggagagat
tccatagaaataaaacgtaaaagactttgtttgaatcagcaggattttaatgaaaattgt
tcatccgaaaaaactgtcaaagaattaacttccccaaagtttccctatgaaaaaacttca
aatccaattagttcagctgcagcaagtgcaataaaattagacattccttaccctgaaagt
gacatatttgaagatgacctacctgatgattccttttctaaggaaataaatattgatggt
actttggaaaatctgtctggtaactcagattataaagaaaacatgtttggtacttctgaa
aatctgtctggtaatttaagaaaatcagaaaagtctgataattttgaaaaaatacgtgaa
gaaggtatgcaagcaataactccaaaggctctgaaaaataatttcaaggaacagtacaaa
caaaacgaagaaatattcagaaaagatacaaccaataacaagagtaataaacagtcagaa
aatatcaggggtgaaatgtttcaaggatttaacactgcagcaggaagtaaaataaacata
acagatagtaaattatttgaagctgagaaactcatggtagtagatagctctgattttact
ggcgagtttactgatgatttcatagtagatcgtaagttagaagttaaaaacagaacagaa
tttgaaaaagtaaaactccaaggagacacaatgctgatgaaaagagaggcttctccagta
cctggtattgaaactaaagtacttgatgttaaaatagagaatacaggcaactatgtcaac
aaaatctcaggtcttaataaaaatagagaaattaacttaagtggtgatagaaactttgaa
aagagacttaattatactcctgcagtagatgtgaatagcagtgtattaggggaacacttg
cagccattaagtaagcaactaacttctttaagttcagaaaaaaatgccaacaaggacatt
acaattccagagtttgaaataaaaacagaactacaggagagccatgcttttagtggaggt
ttttcaacagcttctggaacagatattaagtgttcaactgcaaacctcacaaaggcacag
aaattaatggacataactgacaatgtagaggataaagaagatactaataaaagtttatct
tcaaaatatataaataatggatttgcatcagcatcagggaaaaaattacctatgtcactg
tctagtttatctaaagcagagaaattaatggaagacatgaaagatgatgaggataaggca
ggtgtttccaatgttagttgtgttaacaatattgtggggttttcaactgcaggaggaaag
agtttcaaaatttcgccatcaagtttgtcaaaagctacagctttaatctcagactcagaa
aatattcaacatgtatcagaagtgaatttacgcatcaatctgattcaaactaaaactgaa
aaaattcattgccatggattttctactgcctctggaaaacagtttaatatctcagcatta
agtttgtccaaagccaagagtttaatgaaggagtctcaggagccatttgggggagatcaa
tcagatgtaattgaaaataatgaagttaaagagacaggattttctactgcaacaggaaaa
actttcaatttatccaaatctagtctattaaaagcagaaaacattatggatggaaaagaa
tgtcagctggttgctccagaatctgctttacaatctaataccgatacagggcagtctaat
ggccttatgagtggtttttcttctgcatctgggaaaggtttaaatatttctacagccagc
atttctaaagctacatgtttaatgaaagaaatagatgacaaacaggaacattcagcacct
gatacagaatcaaagaaggaagagtttgaagaaattttcagtaaaatactcaaacaaagc
aaatcaaataacgtattaaatgttgatgtcacaaacaaaagtttacgtgttgaaagtgat
ttggaaaaagaactggaaaatatgctgacaaacaaacaaaataaaaaagaaaatattcca
gttcaaccggcaaaatccacaaggtttccacctggttctaatgttcccaaaggattcaga
cctttcaaacctccaaaaattataagcaagccaaaagttgtccaaaacaaaaaatctgtt
acaacccaaagcgcacctgaagtagattgtacaaaagaagatattttgattaaaactgac
atggctgagcctttgaaactagaacctgaaagtgaagacaattactgtggtcatacttct
gatcctattaaacagaacaataataataatatagacagtacttatttggatgaggttttt
tcagaagaattgttaccatctcaaaaattcagtccagaatctggtcgtccagtgaaaaaa
tgtagaagggaagagtcgacatcctctgttacaagtgacgatttagaattgattgaagct
gaaaaaagtattgagctaacaacatatacaaagttagaaccacttcagacaaatgaatca
aagaatgccacattttcattaggaacaggtggagacaataaaagaactagaattgaaaat
tcagagtgtgaaatagatattgattttaagggagataactctcagtttgccctagaagaa
gttatggatcctggaaatgaattcacacaagttttgattgaaactgataaagacagggtt
gatgaagcattactgaattgtgaagtttttattaaagaaaagagaataaaagctgaaaat
ttagtgcaacctatgaaaagtaattcaaatactgcaactaattctactttagattttatt
ccacaaattacatcaacgtcagcttttgtaaatgaaaaggttgaaatgaatgttgatcct
gatataacatttaattttaaaaatcaaaatccttttcaaagtgcttcagggaagactgtt
tttgtgtcagagaaagcattacagcatgctagacaaacaataaataatgagaacacaaag
aacattgaaggtttaggagactcttttcctcatccaagaaagtccatggaatcaaatatt
tgtaatcctttccaaagtgcttctggtaaaactgttacagtctctcaaaaagctcttgtg
catgcaaggaaaactttagatgatgaaaacattggtttgtttcatagtgcttcagggaaa
agtgttgaagtttcagaaaaagctctccagcatgctagcaaaacactggataattctagt
tcaattcaaagtgtgtcaggaaaaggcatttctgttttgccaaaatctcttcaacatgcc
agacaaacacttattgatgacaattctaatccattccagagtgcttcaggaaagattgtt
caaatttcagaggcagctcttaaacatgaagaaattattactccagttcatgtactgaaa
gacgatgaattgagaagagaaacattgaaagacataagtgacaatccttttcagagtgca
tcagggaaaaatgtactggtttcagaaaaagctctctgtcatgccagaaattcattgaat
gaagaaacaaccaacccatttcaaagtgcttcaggaaagagtgttgaaatttcagagaaa
gctctccaggaagcaaggaaaacactaaatgaagaaatgaccaacccatttcaaagtgcc
tctggaaagagtgttgaaatttcagagaaagctctccagcaagtaaggaaaacactaaat
gaagaaattaatgacccatcagtaaaaaattatagtgtttctgaaaaaaatcttcagcaa
actaggaatacattgaacaatcaaacaaataacccttttcagagtgcttcaggaaaaggt
gtttccatttccgaaaaatctcttcagcaagcaaagaaaacatcaaatgatcaaaatcta
aatccatttcaaagtgcttctggaaaaagtatgattgtatcagaacagtctctcaagcat
gccaggaaaactctgtgtgatgaatcaattaatacatccaaatgtgtgtcagggaatagt
gaagtgaattcagaaaaggctatacaacaagataggaaattattaggacaaaattattca
gaacattgtgtgtcagggaatagtgaagtgatgtctggaaaggctctacaaaaagatagg
aaatcatacggacaaaattattcagtacagtgtgttcccatttccaaaaaggttttgcca
ttttctgataacaattttaacaagaaattgtcaccttcactacaagcaagcagatcagca
gtagaaattaaaaagagaaagagaagtgattttgatgatgattttgatattccattagag
atattggaacagatggagttgtatggtaaaagacaaaggactgatgtactagatgggaga
agaaaacagtctttgacagctggccctgaagattacagtagagatagacaggttcctggg
ttttcaccaaagccattaaagagtcagtctatacacactaatcagaggaacagaatacaa
gaatacctttctggtgacacaagtaaggacactattgcactaccaaagtctacatttaaa
acaccatacaagccatcatcagcacccatagaagatattaccgctacatacaataataaa
cttaaagtaggagctccagtttttgtacccaagactgcaaatagccaaggaaagaaaacg
aatgatcaacagacaagagttcctttacaaccaaagatgccaaataatataaaggtcgaa
agccaatcaggtgtacctggaaaaggtttaaatctgacttctgcaatgaacgaaatcagc
aaagaaatactacagatgatagagaatgctagaaaacaacaaaaagagaagattaaagag
aagaagaggagaaaggttgtccctgtagaaggaagactgtatcagatgaaacagtcacat
ggaagatttaaactgaaagatgttgtcacacttaatagcaatattgaccagtctgctata
atgcacatacatccttcaacaagaaaagtaagatgtagtaatgcagccctccataaattt
taccttcctgacttttatggcaaaaatgtccaccatattattgttggagatggagcaatg
ctggttcctgatgataaaggctatgcagggaaggaggagttttatcaagctttcctgacc
atagaaaatgtagactgtaagctgcttgatgaaaaatggttctgtaatcattttagatgg
gtagtttggaaactagcagcctatgaagttacttcatcttggatctttcctggaagatgt
ctgacaccagaggttgtgatgttacaaatgaaatatagatatgatagagaaatagataag
tgtcaaaggtctgctattatgaagatatgtgagagagatgatacaccatgtaaaagaatg
gttctgtgtatatcggatatcactatggatgttaaggaacctaagatatctctaaccgat
ggctggtactgtattaaagccagggttgatattcccctgtctaacctgattaacaaaggg
tgtatacacattggacataagctatgtatatctggagctgaactgactggttcccaggat
gcttgtccaccattagaggcaccagaatctttgataatgaaaattagtaccaattctaca
agacctgcctcatgggattccacactgggctaccaaactgaccacacccctctatgtgta
cctttgtcatctgtacaaggagaaggtggattgattggttgtattgatgttgtggttgtg
aggaaataccctactatgtacatggagaagttaccagctggtggctgtatatttaggtct
tatgctgctgaagagaaatataaacaaacattccaacaacttcaacaggagaaaatggag
aagttataccaacaattagaaagtcggtttgaaaaagataataaggaagaaagatgtatc
aagagaaagaaattttcatgtaaagacatagagcaacttagctcaggtgaagaaatatat
gaggctataaattctgctaaacatccagatgacatccagacatatttaagcagtaatcag
ttggaactattgatggaataccagagatgtatacaggaagaaagacgacagaagatgaac
tctgaattccagaaaatttggaatgatggagatgagactaataaacagagaaatgtaata
ccactaatgaaagtaagacttgttggatgctgtaggaaagatacagatagtcagatgtca
tctttgttatcaatatggagaccatcttctactcacaatgatcttaaagaaggacaaaga
tacaagatttacagtttgtcagcatcacctggacggtctgggtcaggtggagtacagctg
acagcaaccaaacaaacacagtttaaactattggcattagatgataatatcttggatatg
atttatgaaccaagagaggtacttacaaaacaagacattgttaggaagaggcctgcctac
agagaagtagatatattgggcattgttgtaatggtcaacagtacaaactttgaacacagt
ggaaaacagcaggacactgtgtatttaacagatatcaatgatgatttgatcggtatcaag
ttctggggaggagtaaagcactgtgggttatcagacactttacaggaaggtgtgatatgc
tgttgtagtaacctgtgtgacaaatctaattacccatcaataagtttacctatactggat
tattctacagagttatctgtcctatcacaatctccacagtatccaagtcagaggaaacat
atagagaaccttaaagagaaactcaaggagaaaactgagtttctgaaacaagcaaaggaa
agacttcatgacaagcttaatgcaagaagttcactggcttctgtgattaaaagtcctgag
aaaaattgcagtgaaattttactggaaagcaaaacaccaaacaatcccaagacatcttcc
aagatggctgccttgttgagttattcatctccatcaccaatatcacccgttgtgctgtca
tcatcaaagtcaattcataaagcattcaaacctccatcattgaccagaaaataa
DBGET
integrated database retrieval system
