KEGG   Mytilus californianus (California mussel): 127734110
Entry
127734110         CDS       T08804                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mcaf  Mytilus californianus (California mussel)
Pathway
mcaf03020  RNA polymerase
mcaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mcaf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    127734110
  09124 Replication and repair
   03420 Nucleotide excision repair
    127734110
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcaf03021]
    127734110
   03400 DNA repair and recombination proteins [BR:mcaf03400]
    127734110
Transcription machinery [BR:mcaf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     127734110
  RNA polymerase III system
   RNA polymerase III
     127734110
  RNA polymerase I system
   RNA polymerase I
     127734110
DNA repair and recombination proteins [BR:mcaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      127734110
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 127734110
NCBI-ProteinID: XP_052099722
LinkDB
Position
Unknown
AA seq 210 aa
MDDEQETYKLWRIRKTIMQLCHDRGYLVTQDELDQTLDEFKGQFGDKPSERKPARSDLIV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKTYCQRMQEENITRAIIVVQIGMTPSAKQSLTD
MAPKYILEQFIESELLINITEHMLVPEHVVLIPEEKSELLSRYRLKESQLPRIQQGDPVS
RYFGLKRGQVVKIIRNSETAGRYVSYRLVV
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgatgaacaagaaacatacaagttatggagaatacgtaaaacaataatgcagtta
tgccatgacagagggtatcttgtaacacaggatgaattggaccaaacattagatgagttt
aaaggccaattcggagacaagccaagtgagcgtaaaccagctagaagtgatttgattgtt
cttgtggctcacaatgatgatccaacagatcagatgtttgtattcttcccagaagaacca
aaagttggtataaagacaataaagacttactgtcaacgtatgcaggaagaaaatattact
agagctataattgttgtacagataggaatgacaccatcagcaaaacagtcattaacagat
atggcaccaaagtacattttagaacagtttatagaatctgaattattaatcaacattaca
gaacatatgttagtacctgaacatgttgtgctgataccagaagaaaaatcagaattgtta
tctagatatagattaaaagagtcacagttgcctaggatacagcaaggggatccagtgtct
aggtattttggactaaaacgaggacaggttgttaagataatcaggaattctgagactgct
ggtagatatgtcagttatcgactggttgtatga

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