Mytilus californianus (California mussel): 127734142
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Entry
127734142 CDS
T08804
Name
(RefSeq) protein slit-like isoform X1
KO
K06839
slit 2
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
127734142
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mcaf00536
]
127734142
Glycosaminoglycan binding proteins [BR:
mcaf00536
]
Heparan sulfate / Heparin
Axon guidance molecules
127734142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
LRRNT
Laminin_G_1
Laminin_G_2
EGF_TEN
LRR_9
hEGF
LRR_14
LRR_LRWD1
DHU1_N
LRR_NXF1-5
EGF_CA
EGF_Teneurin
EGF_2
EGF_DL_JAG
Nyv1_longin
Motif
Other DBs
NCBI-GeneID:
127734142
NCBI-ProteinID:
XP_052099786
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MGGRYPFKYRFHWICLISLIVYLESVIGCPTECVCQGKNVDCSYRKLSYVPTNIPKDTQK
LELQGNNLTILRKNDLQGLRHLKVLQLLENQIQTIERGAFRDLVLMERLRIDRNKLDNIP
DELFSEMPNLERLDLSYNKLESINRKSLQGSLSLRNLQLDHNQIICISEESLKPLRKMEI
LTLNNNNLTTLPRGLFDHMKNLRILRLINNKFMCDCHLLWLPRFLRSHRGLGLYTECDSP
SRLQSIEMVDIPESQFRCQGMDSYKAPKCGVEARCPSKCRCMEGVVDCRDLGLTAIPTNL
PEDTIEIRMEQNHIVHIPSGAFSDMKRLRRIDLSNNQISKIHADAFAGQLFLNSLVLYGN
KIVDLPHGVFNGLSSLQLLLLNANKIKCIRKDAFKDLYNLNLLSLYDNQIQSLGNGTFEP
LQNIQTLHLGRNPFICDCNLGWLVEYLIKNPIETSGARCESPRRMERKKIATAKVSKFKC
KGAENHRTENAGNCMVDMACPDSCVCLGTVVDCSGRGLTAIPKGIPTYTTSLKLNKNKLT
RIDSLSEMLTLLDSLRSIDFSNNLIDFIQDMAFDGADKLLEINLADNKLSKLSMKMLYGL
RSVHTISLDKNQITCISNTTFSEMPNIRHLSLFNNQIRCVMEGVFDKQHYLARLNMEGNP
FNCNCHLGWLPEWLSMRNIITGNPTCNAPHQFKDSAITDLKAKDFICEESSDRGCNIGIP
PCCSDGPLESVDSCHPRAFCPQSCTCTGTVVRCSRKNLSTIPSGIPQDTTELYLDVNKIT
HLTPEIGSLTNLRRLDLSNNLLVTLPENIFSNCTQLTALILSYNHLECMADTTLSSLKRL
RVLSLHGNNFSTIPYGAFKDLISLTHLALGGNPFYCDCNLKWLSDYIKKDYVESGIASCA
GPLQMTNKLILTTDSTAFQCNTKEDSGLLSKCNACHKNPCLHDGTCQLQDFKNFTCQCTP
GYYGNTCQNEINACFGNPCVNNGECSVLHHGRFQCACPDGFRGERCEENINDCVQHRCQN
NATCVDGVQTYTCKCATGFNGKHCESKIPFCQGVYNFCQNGAKCISTEHDYRCQCTKDWS
GKNCTENIDDCKTHICQNSGRCIDGVGTYNCLCSKGYTGKYCDVPPARKQFYAAAGPCQH
HDCQNNAVCHPQKGNREYSCECVSGFSGKKCEKLKSVTFKAQDSYIQMSKIDFQSEVNIT
ISLKTESKSGLIFYTGSEPHLAVELFRGRVKISFYTGDDHASTMYSYIYSFVTIDDDKIH
KIQLMVQRRNITMRIDDGKPQSVINQGNNDFLNHDEDVYLGGMPQDVGQSAKDKFHTRNL
ASFKGCFQEVSVNGKVLDFTASIYNHKVMPGCKVDVCHNNRCKKGHCKPRKKRGGYRCKC
KRGYSGKFCDIAPSCSRKVFKNIYVDPKTDCQSRTKIKFRVCEGSCGKDCCKPKKIKTRK
VRLYCKNGSSYVHNLPVIRRCGCKKC
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgggtggaagatatccgttcaagtacagattccattggatttgtttaattagtttaatt
gtgtatttagaaagtgttataggatgtcctacggaatgtgtttgtcagggtaaaaatgtg
gattgtagttacagaaaactgtcctatgtacctactaatattccaaaagacactcaaaag
ttagaactccaaggaaacaatttgacaattttgaggaagaatgacctccagggtttgaga
catttaaaagttttgcaattgttagaaaatcaaatccagacaatagaaagaggcgcgttc
cgtgaccttgtcctcatggaaagactgagaatagacagaaacaaactagacaacatccct
gatgaactgttctctgaaatgccaaatttggagagattagatttgagctacaacaaacta
gaatctatcaacagaaaatctctacagggttctctaagtttaagaaatttacaattagac
cacaatcagataatctgcatatctgaagagtcattaaaaccattgagaaagatggaaatt
ttaactttgaataacaacaacctaaccacattaccacgaggactctttgatcacatgaaa
aatctcagaatattgcgattgatcaacaataaattcatgtgtgattgtcatttactttgg
ttgccaagatttctgaggtcacatcgaggcctcggtctctacactgaatgtgattcacca
tctcgacttcagtccatagagatggtagatattccagagtcacagttcagatgtcaaggc
atggacagttacaaagcgccaaaatgtggagtggaggcccggtgtcctagtaaatgtaga
tgtatggagggtgtggtcgactgtagagatttgggactgacagcaatccctactaatcta
ccagaagacaccattgaaatacgaatggaacagaaccatatagtccacatcccttcagga
gcctttagtgacatgaagagactcagaagaattgacctcagcaacaaccaaatatccaag
atccatgctgatgcttttgctggacagttatttctcaattctttagtactttatggtaac
aaaatagtagacctaccacacggtgtatttaatggtctttcgtcactacagttattatta
ttaaatgcaaacaagatcaaatgtataaggaaggatgctttcaaagacctatataacctt
aatcttctatctttatatgataatcagatccaatcacttggcaatggaacatttgaacct
ctacagaatatacagacactgcaccttggaagaaacccctttatctgtgattgtaaccta
ggatggcttgttgagtatctgattaagaatcccatagagaccagtggtgctcgatgtgaa
agtccccgtagaatggagagaaagaaaatagctacagctaaagtcagcaagtttaaatgt
aaaggtgcagaaaatcatagaacagagaatgctgggaattgtatggtagacatggcatgt
cctgactcctgtgtgtgtcttggtactgtagtagactgttctggacgaggacttacagct
atacccaaaggcattccgacttacactacctcattgaagttgaacaaaaacaagctaaca
agaatagattctctgtctgaaatgttgaccctgttagatagcttacgatccatagatttc
agtaataatctgatagatttcatacaagatatggcttttgatggtgcagataaactatta
gaaataaatctagccgacaacaaacttagtaaactttcgatgaagatgttgtatggatta
agatcagtacataccatttctttggacaagaaccagataacatgtataagtaatacaaca
ttctcagagatgccaaatatccgtcacttgtcattatttaataatcagatcagatgtgtg
atggagggtgtgtttgataaacaacattatttagcacgtttaaacatggaaggtaaccca
tttaactgtaactgtcatctgggttggttacctgagtggttaagtatgaggaacattata
actggtaatccaacttgtaatgcacctcatcagtttaaggactctgctatcacagatcta
aaggcaaaagattttatttgtgaagagagcagtgatagaggatgcaatattggtatacct
ccctgctgtagtgatggtccactcgaatcagttgacagttgtcaccctagagccttttgt
ccacagagctgtacctgtactggtactgtagttagatgtagcagaaagaacttgagtacg
attccaagtggtataccacaagatacgacagaattatacttggatgtaaacaagataact
cacttgactcctgaaataggttcactgacgaacctcagaagattagatctgagtaacaat
ctactggtaaccttgcctgagaatatcttcagtaactgtacacagttaactgcattaata
ttgagttataaccatttagaatgtatggcagatacaactttatcctcccttaaaagactt
agagttctatcattacatggtaataatttctcaaccattccatatggagccttcaaagat
ctcatttctctcactcatttagctttgggaggtaaccctttctattgtgactgtaattta
aaatggttgtcagattatatcaagaaagactacgtagagtcaggtatagcctcctgtgct
ggacctctacagatgaccaataaactgatcttgaccacagattctacagcattccagtgt
aatactaaagaagattcaggactactcagtaaatgtaatgcctgccacaaaaacccctgt
ctccatgatggaacctgccaacttcaagacttcaaaaactttacttgccagtgtacacct
ggttactatggcaacacatgtcaaaatgaaatcaatgcttgttttgggaatccctgtgtg
aataatggagagtgcagtgtgttacaccatgggagatttcagtgtgcctgccctgatggt
tttcgaggagagagatgtgaagaaaatataaatgactgtgttcaacatagatgtcagaac
aatgccacatgtgttgatggagtacagacatatacatgtaaatgtgccacaggatttaat
ggtaaacattgtgaatccaagattcctttctgtcaaggtgtttacaacttttgtcaaaat
ggagctaaatgtatcagcacagagcatgattataggtgccaatgtaccaaagactggtca
ggtaaaaattgtactgagaacattgacgattgtaaaactcacatctgtcagaatagtggc
cgatgtatagatggtgtagggacatataattgtctctgttctaaaggttatacgggtaaa
tactgtgacgtacctccagcaaggaaacagttttatgctgctgctggtccctgtcagcat
catgactgccagaacaatgctgtatgtcatccacagaaaggcaatagagaatactcttgt
gaatgtgtgtcagggttttcaggtaaaaaatgtgagaagttaaagagtgtgacatttaaa
gcacaagattcttatattcaaatgtccaagatagatttccagtcagaagttaatatcact
atttccctgaagaccgaatcaaagtcaggacttatcttctacacaggaagtgaaccccac
ttagctgtggaattgttccgtggtcgagtgaaaataagtttttacactggtgatgatcat
gcttccaccatgtacagttatatttacagttttgttaccattgatgatgataagattcat
aaaatacagttaatggtacaaagacgtaatattaccatgaggattgatgatgggaagccg
caaagcgttattaaccaagggaacaatgattttctaaatcacgatgaagatgtctacctt
gggggaatgccacaagatgtaggacaatctgcaaaagataaattccacacacgtaatctt
gcaagtttcaaaggttgtttccaagaagtatctgtgaacggaaaagtattagatttcact
gcatctatttataaccacaaagtaatgccaggatgtaaagttgatgtttgccataacaat
cgatgtaaaaagggacattgtaaaccaaggaaaaagagaggaggttacaggtgtaaatgt
aagagaggatattcaggaaaattctgtgatattgcaccatcatgttcacgtaaagttttc
aaaaacatttatgttgatccaaaaacagactgtcaatcacggacaaaaataaaattccgc
gtttgtgaaggatcttgtggaaaagactgttgtaagcctaaaaaaatcaaaacacggaaa
gtgagactatattgtaaaaatggttcatcgtatgtacataacttacctgtaattagaagg
tgtggatgtaaaaaatgttag
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