Mytilus californianus (California mussel): 127734436
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Entry
127734436 CDS
T08804
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127734436
Enzymes [BR:
mcaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
127734436
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
127734436
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
zf-C2H2_DHX34
DEAD
HA2_C
AAA_22
AAA_25
HA2_N
Dynactin_p62
AAA_19
ATPase
Motif
Other DBs
NCBI-GeneID:
127734436
NCBI-ProteinID:
XP_052100248
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MEMGKDHKHKHKKHKRHHSREDHSDDEESWSVYKKKRKDYHREKEEDERHKSKKSDHTSK
REVNKEVKLSSEKPEKDLESNKLCEYKDSYSYRRHDKDKMHDEIKDNDNKRSSNKEYNSR
THKSRLSTTEQSPEKPDKRVRRRELDEKEDLNYLRRRKERNSNHHHPEALNEMEYVIKEK
HAVESDNEEEREEDRDFAFDFHQYRSDLNRIFFRDDEFIKRPSKEYDDFWSFLLKYQQFQ
RKKYYREKDKQEIIEKDKKTTESTGDLDIPQHYDNRYRISFSIKSKNVDDFLKKGRLVDA
DVSRDLTKHRVRQFRNILIHYVDFLQKQKFNKLKKIKTDQENLPIFQYKQMIQGMVQRHQ
VVVVAGDTGCGKSTQTPQYLLEAGFTKIACTQPRRIACISLSKRVGYETLNEYGSDVAYQ
VRFEKTKTRSTKILFLTEGLLLRQMSEDQHLKQYSVVVIDEVHERHIHTDFLLGVIKCLL
KHRDDLKLVLMSATINIDLFSGYFDDAPVVKVPGRLYPIELEYKPIQRDDSKAERLDPSP
YLKIMQLIDHKYPESERGDLLIFLSGMSEIMSVVEAAKTYATNTKRWIILPLHSALSADE
QDKVFDISPEGVRKCIVSTNIAETSVTIDGVRFIVDSGKVKEMSFDPKYKMQRLQEFWIS
RASAEQRKGRAGRTGPGVCYRLYDSPDYDAFQEYATPEIQRVTLDSLILQMVSMGLPDAR
KFPFLEAPDITSIENAIIFLKEQGAMKDDETLTPIGNMLSRLPVDVVIGKMLIMGSIFHM
IDAVLSIAAAMSVQSPFTNRAYVDRDAMEARKPLESDHGDPFTLLETFDEWIQVKAEGRG
TKKWCKRRGLEEQRFYEIIRLRNQFKELLKDHHLLDKTLIGERYLTSEERRRQHGDRRRL
GELKKEQRNESKKRKVLKLEDSEYRLSEGEEEDDDNEGTDIKDLEFRLSHDLNKLQTISN
QSRSFTLKDINLLKIILCSGLYPQVAINDDTNSYKSDSEQSFHTKNKPFLLLHPTSVFAS
QPELLQPPEPEKQNVGPSDLRGKLSNKHQLLTYVKLLETDKPYLVNTMRVPALQTVTLFS
NFLDTSSDCTRLICDGWLEIKFPDAEIAQDILSSVIMLRATWQNLLQLRLQDTFKNFNSE
KKINPRARKLEKILAEKLSQFLSSDVLYAVRRVMTAEMKYVYKGPGRVDENSDLPSGLFL
SNMKNDIHPVKGGIQINDYLCYNCLIDEASAAVWGEYTSSMQKHWTCPRCKASLIITVLE
RLQHESECQSANINATKEEVKKEIEEEKNIQLNPLRKSYHCDKCDKDYHFTNTEILKHKK
SCSGS
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggagatggggaaagatcataaacataagcataaaaaacacaagagacaccacagcaga
gaagatcattctgatgatgaagagtcatggtctgtctataaaaagaaaaggaaagattac
catagagaaaaggaagaagatgaaagacataagagtaaaaagtcagaccatactagcaaa
agagaagtcaataaggaggtaaaattgtctagtgaaaaaccagaaaaagatttagagagc
aacaaactgtgtgaatataaagattcatattcatacagaaggcatgacaaggacaaaatg
catgacgaaattaaagacaatgataataaaagatcaagtaataaagaatataactcaagg
actcataagtctcgtttatcaacaactgaacaatcacctgagaaacctgataagagagta
agacggagagaattagatgaaaaggaagatttaaattatctgcgaaggagaaaagaaagg
aactcaaatcatcatcacccagaagctttgaatgaaatggagtatgttatcaaagagaaa
catgctgttgaatcagataatgaggaagaaagggaagaggatagagattttgcatttgat
tttcatcaatacagatcagatcttaacagaatatttttcagagatgatgaattcattaaa
aggccatcaaaggaatatgatgacttttggtcatttttgttgaaatatcaacagttccag
aggaaaaaatattacagagagaaagataaacaagaaattatagaaaaagacaagaaaaca
acagaatcaacaggggatcttgatattccacaacactatgacaacagatacagaattagt
tttagtatcaaaagtaaaaatgtggatgatttcttaaagaaaggaagacttgtagatgct
gatgtttctagagacctaacaaaacacagagtgagacagttcagaaatatcttgatccat
tatgtggatttccttcaaaaacaaaagtttaataaactgaagaagataaagacagaccaa
gaaaatttacccatcttccagtacaagcagatgattcaaggaatggtacaaagacatcag
gtggtggttgtcgctggagatactggatgtggaaaatctacacagactccacagtattta
ctagaagcaggatttacaaagatagcctgtacacagcctaggaggatagcatgtatatct
ctgtctaagagagttggatatgaaactttaaatgaatatggatcagatgttgcttatcaa
gttagatttgagaagacaaagacaagatctactaaaattttattcctcacagaaggtctg
cttttaagacagatgtcggaggatcaacatctgaagcagtacagtgtggtagtaatagat
gaagtccatgagagacacatacatactgactttctgttaggtgttataaagtgtctgctg
aaacatagggatgatctcaaactagttcttatgtctgctaccattaacattgacttattt
agtggatactttgatgatgcacctgtagttaaggttcctggcagattatatccgatagaa
ctagaatacaaaccaatacagagagacgattccaaagcagaaagattagatccttctcct
tatctaaagattatgcagctaattgatcataagtacccagaatcagaaagaggtgactta
cttatatttctgagtggtatgtcagaaattatgtcggtagtagaggcagccaaaacatat
gcaacaaataccaagagatggatcatactgcctctacacagtgcactgtctgctgatgaa
caggataaggtgtttgatatttccccagaaggagtgagaaaatgcattgtatctacaaac
atagcagagacttctgtaacaatagatggagttagatttatagtggattcaggaaaagtc
aaagagatgagttttgatccaaagtataaaatgcaaagattacaagaattttggatcagt
agagcaagtgctgaacaaagaaaaggaagagctggtagaacaggaccaggagtatgttat
agactgtatgatagtcctgattatgatgcctttcaagaatatgctacaccagaaatacag
cgggtcactctggactctttaatcctacagatggtctccatgggtcttcctgatgctagg
aaatttccatttctagaggcaccagacataactagtattgaaaatgcaattatatttctt
aaagaacaaggagctatgaaagatgatgagacattaacacccattggtaatatgttatca
aggctaccagtggatgttgttattggtaaaatgttaatcatgggttctatatttcatatg
atagatgcagtactatcaatagcagcagctatgagtgttcagtctccatttacgaataga
gcttacgttgatagagatgctatggaagcaagaaaaccactagaatcagaccatggcgac
ccattcaccttactagaaacttttgatgaatggatacaggtaaaagctgaaggaagaggt
acaaagaaatggtgtaagaggagaggacttgaggaacaaagattttatgaaataataaga
cttcgtaatcagtttaaggaattgctgaaagatcaccatttgttggacaaaactttaata
ggagaaagatatttgacaagtgaagaaaggagaaggcagcatggagacagaaggagattg
ggagaattaaagaaggaacaacgaaatgaatcaaagaaaagaaaagttctgaagttggaa
gattcagagtacagattgagtgaaggagaagaagaagatgatgacaatgaaggaacagat
atcaaagatctagaattcaggttatcacatgacctaaataaattacagactatttcaaac
caaagtagaagtttcaccttaaaggatataaatttgttgaagattatattgtgtagtgga
ctttatccacaagtagctataaatgatgatacaaactcctataaatctgactcggaacaa
tccttccatacaaagaacaaaccatttttgcttcttcatccaacttctgtgtttgcaagt
cagccagagttacttcagccaccagagccagaaaagcagaatgttggaccaagtgattta
agagggaaactaagtaacaaacaccagttactaacttatgtaaaattactggaaacagac
aaaccatacttagtgaacacaatgagagttcctgctctacagactgttaccctattctct
aacttcctggatacaagttctgattgtaccagactcatctgtgatggatggttagaaata
aaattccctgatgctgagatcgcccaggatatcctgtctagtgttataatgctcagagct
acatggcaaaacttgcttcagttaagattgcaggatacatttaaaaattttaacagtgaa
aaaaagataaaccctagagctagaaaacttgagaagatattagcagagaaattgagtcag
ttcctgagtagtgatgtgttgtatgctgtcagaagagttatgactgctgaaatgaaatat
gtttacaagggacctggaagagttgatgaaaattcagatctaccaagtggattatttttg
tcaaacatgaagaatgatatccatccagtgaaaggtggaattcaaattaacgattactta
tgttataactgcttgatagatgaagcttcagccgctgtttggggagaatacacatctagt
atgcagaaacattggacctgtcctagatgtaaagcttctctaatcatcacagtcttagaa
aggttacaacatgaatcagaatgccaaagtgcaaatattaatgcaacaaaagaagaagtg
aagaaggaaatagaggaagagaagaatatacaactgaatccattaagaaagtcttatcac
tgtgataaatgtgacaaggattatcattttacaaatacagaaatattgaaacataaaaaa
agttgcagtggaagctga
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