Mytilus californianus (California mussel): 127735264
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Entry
127735264 CDS
T08804
Name
(RefSeq) DNA mismatch repair protein Msh3-like isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127735264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mcaf03400
]
127735264
DNA repair and recombination proteins [BR:
mcaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
127735264
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
127735264
NCBI-ProteinID:
XP_052101340
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MSKRKSINLTKLKSKVDESRQATISKFFSSNTTDNNTKTSKSYEPEVQVINIDDSPVKST
APRKIPSFSQKKRPREENVSEGDSSKKKCLDVSAGRTNGNIAPNDGQQPECSSKVILNES
TKLKLKQFEPDLDREKTEISIKQFKKGNLNTANNAAKTKNNHSDSDSDEDVIIKDDRLSV
FSHTSQSSTPSKGKSPINKQTKTKYTPLEQQYVDIKNKYPDALLLVECGYKYRFFGEDAE
VAAKVLKIFCHLDHNFMTASIPTHRLFVHVRRLVSAGYKVGVVKQMETAALKAAGDNKSA
PFTRQLQSLYTKSTLIGEDVNPISGEITGEATVEEQTSFLLCVYETPPDKTKQTSIGILA
VQPSTGDIIYDFFNDDDTRSELETRITHIQPAEILIPCNLSSKTEKIIKGIIDISTSEDD
RIRLERQSEEHFEYDQAFQTVSDFYKSDAKCAGRIQEIINLPKPVISCLSGVLVYLKDFG
LSQILKLTGNFCQFSTKSLYMQLQTSVLRNLEVFQNLTDGKEKGSLFWALNQTVTRFGGR
MLKSWLKKPLLSAKHILDRQEAINELLQGKNTQVLAHLRSSLAQTPDLEKGISSVYFKKC
SVLEFFFVCKSLLKWSEDVQLITKQLDGTLSSEILTDILNDIPQLLEDVKSLLNNLHENN
VRDKEKTNLFSDESLFPTVQMRKKEIKDVEKEMLDHRRTVRLILKQPALDYTTVLGTEYL
IEVKNKVSHVVPTDWLKISSTKAVSRFHPPFIQATYKKLNQLREQLKKDCDEAWLQFLGW
FEDDYQKYRKAVHHIATLDCLFSLSLVARLHGYCRPKIKENEVCINIEQGQHPVIQQILQ
GSQQFVPNNTNISTNETKVMIITGPNMGGKSSYIKQVALISILTQIGSYVPAESAEMGIV
DAIYTRMGASDEIYKGRSTFMVELQEASDIMLKATPRSLVILDELGRGTSTHDGVAIAYA
SLDYFIKQVKCLTLFVTHYPVLSELEQTYPNIVQNHHMSFMVNEDSGKIGDEDSSNAVTF
LYQLVSGCAGKSYGLNVARLASIPQDILNTAAKKSQEFHNLLVTKREREEEFRNIYLTEN
TTILYQTLQNSSVMQ
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgaaaaagtataaatctgacaaagcttaaatcaaaagtagacgaaagcaga
caggcaacaatttccaaattcttttcgtcaaatacaaccgacaacaatactaagacatcg
aaaagttatgagcctgaggtccaagtgataaatatagatgattctccggtaaaatctacg
gctccaagaaagattccttcattcagtcaaaagaaaagacctagagaagaaaatgtttct
gaaggtgattcatctaaaaagaaatgtttagatgtatcagctggtagaactaatggaaat
atagctccaaatgatggacaacaaccagaatgctcgtctaaagttatcttaaatgaatca
acaaaattgaaactaaaacaatttgaaccagatttagacagagagaaaacagagattagc
atcaaacaatttaagaaaggaaatttaaacacagctaacaatgcagctaaaaccaagaat
aatcatagtgattctgacagtgatgaagatgtgataatcaaagatgatcgtctatcagtg
tttagccatacatctcaatcgtcaacccctagtaaagggaagtcaccaatcaataaacag
acaaaaactaaatatacaccactggagcaacaatatgttgatattaaaaataagtaccct
gatgctttactacttgttgaatgtggttacaagtacagattctttggagaagatgcagag
gtagcagcaaaagtactgaagatattttgtcatctggatcataattttatgacagcatcc
attccaacacatagattgtttgttcatgttagaagactggtttctgcaggatataaggtt
ggtgttgtaaaacaaatggagacagcagctttgaaagcagcaggtgacaacaaaagtgct
ccatttaccagacaactacagtcattgtataccaagtctacattgattggagaagatgta
aatcctatctcaggggaaataactggagaggctactgttgaggagcagacgtcatttctg
ttgtgtgtgtatgaaacaccaccagataaaactaaacaaacatctattggaattctggct
gtccaaccttcaactggtgacattatttatgattttttcaatgatgatgatacaagaagt
gaactggaaaccaggataacccacatacagccagcggaaatactaataccttgtaacctg
tcttcaaaaactgagaaaataatcaaaggaatcatagatataagtacatcagaggatgat
agaataagattagaaagacaatcagaggaacattttgaatatgatcaagcatttcagaca
gtatcagatttctacaagtctgatgctaaatgtgctggtagaattcaggagataataaat
ttaccaaaaccagttataagctgtttgtcaggtgttttggtgtacctcaaagattttgga
ctaagccagattctgaaacttactgggaatttttgtcagttttctacaaaatccctctac
atgcagctacaaactagtgtactcaggaatttagaagtgtttcaaaatcttactgatgga
aaagagaaaggatcattattttgggcccttaaccagactgttactagatttggtggtaga
atgttaaaatcatggttgaaaaaacccttgctttcagcaaaacatattttagatagacag
gaagcaataaatgaattactacagggcaaaaatacacaggttcttgctcacctcagaagt
tcattggcacagacacctgacttagaaaaaggaatcagttcagtatatttcaaaaagtgt
agtgtacttgaatttttcttcgtatgtaagtctctacttaaatggagtgaagatgtccag
ttaataactaaacagttagatggaacactatcatcagaaatactcactgatatactcaac
gatattccacagttattggaagatgttaaatctttgttaaataatttacatgaaaataat
gtcagggataaagagaaaactaatctgttctctgatgaaagtctgtttcctactgtacag
atgagaaaaaaagagataaaggatgtggagaaggaaatgttagatcacagacgaactgtc
aggttgatattgaaacagcctgctttagattacactactgtattaggtactgaatactta
attgaagtgaaaaacaaagtgtcacatgttgtacccactgattggctgaagataagcagt
acaaaggcagttagtagatttcatcctccatttatacaagcaacttacaagaaactaaat
caactaagagaacagttgaagaaagactgtgatgaagcttggttacagttcctagggtgg
tttgaggatgattaccagaagtacaggaaagcagttcatcacatagctacattagactgt
ttattttccctatccttagtggctaggttacatggatattgtaggccgaaaataaaggag
aatgaagtttgtataaacattgaacaaggacaacatccagtaatacaacagattttacaa
ggaagtcaacagtttgttccaaataataccaatatatctacaaatgagactaaggttatg
ataatcacaggaccaaatatgggagggaagagttcttatataaaacaagtagctctgatt
tctatccttacacagattggatcttatgttcctgctgaatcagcagaaatgggaattgtg
gatgctatttacaccaggatgggagcttcagatgagatttacaaaggcagaagtacattt
atggtagagttacaggaagcctctgacataatgttaaaagctacaccaagatctttggtt
atactggatgaattgggcaggggtaccagtacacatgacggtgtagcaatagcttatgct
tctttggattattttataaaacaggttaaatgtctgacgttatttgtaacgcattaccca
gtattatcagaactagaacagacgtatccaaatatagtgcagaatcatcacatgtcattt
atggtcaatgaagactcaggtaaaataggtgacgaggacagctccaatgcagtgacattt
ttgtaccagcttgtcagtggctgtgctgggaaaagttatggattaaatgtggcaagactg
gcatcaatacctcaggacattttaaatactgcagctaaaaaatctcaggagtttcataac
ttgcttgttacgaagagagagagagaagaagaattcaggaacatctaccttactgaaaac
accacaattttatatcagactttacaaaattcttctgttatgcaataa
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