Mytilus californianus (California mussel): 127735843
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Entry
127735843 CDS
T08804
Name
(RefSeq) exosome complex component CSL4-like isoform X1
KO
K07573
exosome complex component CSL4
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127735843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcaf03019
]
127735843
Messenger RNA biogenesis [BR:
mcaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
127735843
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
127735843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
127735843
NCBI-ProteinID:
XP_052102195
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MSAPRICVPGQRICHIENGTTAGNGTYQRNGFIYSSMAGYLKTNKTEDGQVLIEVKRDIE
QNAVPSVDAVVTARVTNVNPRFCKCLILSVGKIGLREPFRGQIRKEDVRATEKDKVEMYK
SFRPGDIIVARVLSLGDAHSYLLTTAENELGVVMATSEAGANMDPISWCEMKCPKTLAIE
HRKVAKVQPKYIQYTDT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgcccaggatttgtgttccaggtcaaagaatatgtcatattgaaaatggtaca
acagctggcaatggtacttatcaaagaaatgggtttatatactccagtatggctggatat
ctcaaaacaaataaaactgaagatggtcaggtgttaatagaagtaaagagagatatagaa
cagaatgcggtaccgtcagtagatgctgtagttacagcccgggtgacaaatgtaaatcca
aggttctgcaagtgtttgatactcagtgtagggaaaataggtctcagggaaccattcaga
ggacaaatcaggaaagaagatgttagagccacagaaaaagataaggttgagatgtataag
tcattcagaccaggagatataattgttgccagagttttatctctaggtgatgctcattca
tatttattaactacagcagaaaatgaattaggtgttgtcatggctaccagtgaagcaggt
gctaacatggatccaatcagttggtgtgaaatgaaatgtccaaaaacattagccatagaa
cacagaaaagtagccaaagtacagccaaaatatatacagtatactgatacttga
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