Mytilus californianus (California mussel): 127735874
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Entry
127735874 CDS
T08804
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
mcaf
Mytilus californianus (California mussel)
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcaf03009
]
127735874
Ribosome biogenesis [BR:
mcaf03009
]
Eukaryotic type
90S particles
Other 90S particles
127735874
Pre-60S particles
Other pre-60S particles
127735874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
127735874
NCBI-ProteinID:
XP_052102234
LinkDB
All DBs
Position
Unknown
AA seq
1305 aa
AA seq
DB search
MGSKSKLIKRISKSATKTKFKGKRWKKGKSSNSNPDTKRFRDAAKTRFFQPMSSAGTSGL
TVDALAKHDEDHFSKDTDSLQEGFEKLSTSDKISVGAKTFNTWATNYTECTNVTFNKVHR
YWSSNSALHKEVIAILAAVTEVIKTNDGNETETEYFAALMTALDTTDDVESQAAIMYLLS
LVIKRVPVAVLRSKFAEVSKKFLDLLAANVDGSSTALIKSLLLSLAGVLRVQDQASWSNT
SVQRVYSGLLTFITHKKPKIRKAAQQGVCLVLRGSLFMTQGDPPSYHPAAQITAKYCIQQ
IEQCGGTGEALDTLHTLALLKDILAQFPLNSMKSCCETILRMMTLSNVMVTSCGMQTLYG
MFVNKPKPSNLSAELNAQLITAMYDYQPSENDVQPMRAWLAVMEKGHINLTRLDEKLCIS
HLPRLFSSTMTCLLSDKTDINSVASKTMKDVLKECVTPVADSVKHLVDTAPSGSATPIHK
MVKAVESGLSYQFHSVWGLVLQIYTVFFEVLGKQCPKLFKKSLQSIVDLRDSPRFAYKAE
LDHAIGCAVKYMGPRQVLEAVPLNITGDNDDYNFPRSWMIPVIRDNVCNTELGFFTSYFL
PLAAKFRQRALEATQTDNIVVGKSYETLQHQMWTLLPGFCNKPTDLVQSFKGIAKILGTA
INDHSNLRMEVMSSLRKIINHSMTEEESKTEVAKFAKNFLPILFNIFTADSDNTKDPVKL
AVLETIKSYLQIADMNLVSTFCDKCTEKLKEENITASKRHSLLDIAITELPYIDDKRIKQ
LYSIACSYLQSLDKTLQKKSYRILEEICSGKSAGCKTFITQNLSDIQSTLLTSLSSSSPS
SKAPRLRCLINLFQQFDTEQPDFMLAVIPEAILCTREVGERARTAAYSLLVQMCKSQIEQ
SDESQADVICKYFKMILAGLGGSPQMVSCTLLALTRILYEFKESIDGNLLGNIIESVCLL
LMSKAREVVKSSLAFIKVLLSAYQDVQLASHLKQIMSSLTSMKDDCRQHFRFKSKEIYAK
LIKKFGYETIYNMAPSSIHKVLMNVRKTQERNKKKKKEEKTEEDEDSDEEHRRARPESVE
ELLRDSDSEMEDDGNKKSKGQKSKKNKDSIKAKLAWLQEGADDIVDFLDTNASKKVMATR
PQEKSSKNKAKKSKEQQYKTATDGRLIITEDSSDEEKHKGQSQMSEDEDLEDLFQAIEGI
GNKRSKKRKIEDLGSDDESARPKYKAGGKGIHRPIGESDHGKEYRAKKAKGDIKKKGKPD
PYAYVPLQFQSLNKRKKAKMQGQFKNLVKGAKKGAMKGTKKKHKK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgggatcaaaatctaaactaattaaaagaatatcaaaatcagccactaaaacaaaattt
aaaggaaagaggtggaaaaaaggaaagagtagcaatagtaatccagacacgaaacgtttc
agggatgctgcgaaaactagatttttccaaccaatgtcttcagcaggtaccagtggatta
acagtagatgctttggccaagcatgatgaagatcatttttccaaagatacagattcatta
caagaaggcttcgaaaaactttctacatctgacaaaattagtgttggtgctaaaactttc
aatacatgggcaactaattacactgaatgtacaaatgtcacatttaataaagtccataga
tattggtcatcaaattctgctctacacaaagaagtgatagccattttagcagcagtgaca
gaagtaataaagaccaatgatgggaatgaaacagaaacagaatattttgctgcattgatg
acagcattagatacaacagatgatgtagaatcacaggctgctatcatgtatttactcagt
ctggtcataaaaagagttccagttgcagttctgagaagtaaatttgctgaggtatcaaag
aaattcctggatttgctggcagcaaatgttgatggtagttctacagctcttattaaatcg
ctgctgttgtcattagctggtgttttgagagtacaagaccaggcatcttggagtaacaca
tcagtacagagagtttacagtggcttactcacatttataactcacaagaaacctaagatc
cgtaaggcagctcagcagggtgtttgtcttgtactgagaggcagtttgtttatgacacaa
ggggatcccccatcataccatcctgcagctcagataacagctaaatactgtatacaacag
atagagcaatgtggaggtacaggagaggcattggatacattacatactttagccctgttg
aaggacatcctggcacagtttcctctaaacagtatgaagtcatgttgtgagacaattctt
agaatgatgactttaagtaacgtgatggtaacttcctgtggaatgcagactttatatgga
atgtttgtcaacaaacctaaaccatctaacttgtctgctgaattaaacgcccaattaata
acagctatgtatgattatcaaccatctgaaaatgatgtacaaccaatgagagcttggttg
gcagtgatggaaaaaggacatattaacttaacaagattggatgagaaattgtgtataagc
catctgcccagattgttttcctcaactatgacctgccttttatctgataagactgacatt
aactcggttgcttctaaaaccatgaaggatgttttaaaggagtgtgtgacaccagtggct
gacagtgtgaaacatttagtggacacagctcccagtggatctgcaacacctatacataaa
atggttaaagctgtggagagtggactaagttatcagttccattctgtatggggattagta
ttacagatctacacagttttctttgaggttcttggaaaacagtgtccaaagttatttaaa
aagagtttacaatcaatagtagatttaagagacagtcctagatttgcctataaagctgag
ttagatcatgctattggatgtgcagtaaagtacatgggcccacggcaggtgttggaggct
gtaccacttaatataactggagacaacgatgattacaacttccctcgtagctggatgatt
cctgtaattcgagacaatgtgtgcaatacagaattaggattttttacatcttatttcctc
ccattagcagcaaaatttcgacaaagagcattagaagcgactcagacagacaacattgta
gtaggtaaatcttacgaaacattacaacatcagatgtggactctgctcccaggattttgc
aataagcccacagatttagtacagtctttcaaaggaatagcaaaaattctaggaacagca
ataaatgatcattcaaacttacgaatggaagtgatgagttccctcaggaaaataattaac
cactcaatgactgaggaggagagtaaaaccgaagtggcaaagtttgctaaaaactttttg
ccaattttgttcaacatatttactgctgattcagataatactaaagatcctgttaagtta
gctgtattggaaaccattaaaagttacctacagatagctgatatgaatttggtgtctacc
ttctgtgataaatgtaccgagaaattaaaagaagaaaatattactgcttctaaaaggcat
tcattattagacatagccattacagaattaccctatatagatgataaaagaataaaacag
ttgtatagtatagcttgtagttatctccagtctttagacaaaacattacagaagaagtcc
tacagaatattagaagagatttgtagtgggaaatcagcaggctgtaaaacatttataacc
cagaacttgtcagatattcagtcaactttattaacttctttgtcatcatctagtccttcg
tctaaagcacctcgacttcgatgtttaataaacttgttccagcagtttgacacagaacaa
ccagactttatgttagcagttattcctgaggctatcttatgtaccagagaagtaggagag
agagctagaacagctgcctatagtttgttggttcagatgtgtaaaagtcagatagaacag
tcagatgaatctcaagctgatgttatctgtaaatactttaagatgatattagctggtctt
ggaggatcgcctcagatggtcagttgtacgctgttagcactgacaagaattttatatgaa
ttcaaagagagtatagatggcaatctcctgggaaatataatagaaagtgtgtgtttactt
ctgatgtctaaagctagagaggtggtcaagtcatctttagctttcatcaaagtgttactg
tcagcttaccaagatgttcaactagcatcccatcttaaacagattatgtccagtcttact
agcatgaaggatgattgcagacaacattttagattcaaatccaaagaaatttatgccaag
ttaataaaaaaatttgggtatgagacaatatataacatggcaccctcaagtattcataaa
gtattgatgaatgtcagaaagacacaggaaagaaataaaaagaaaaagaaagaagagaaa
acagaagaagatgaggacagtgatgaagaacataggagagcacgaccagaaagtgtggag
gaattattacgagattcagattctgaaatggaagatgacggcaataaaaaatctaaaggt
caaaagtcaaagaaaaataaagactcaatcaaagctaagttggcatggttacaagaaggt
gctgatgacattgttgatttcctggatacaaatgcatcaaagaaagtcatggcaacaagg
ccacaggagaagtcttctaaaaacaaagccaagaagtcaaaagagcagcaatacaaaaca
gcaacagacggcagacttatcattacagaggatagcagtgatgaagaaaagcacaaaggt
cagagtcagatgtctgaggatgaggatttggaggatttgttccaggctattgaaggtatt
gggaataagagatccaagaagagaaaaatagaagatttgggatcggatgatgaatctgct
cgtcctaaatataaagctggaggtaaaggtatacacagacctattggtgaatcagaccat
ggtaaagaatacagagcaaagaaagctaaaggtgatataaagaagaaagggaaaccggat
ccatatgcctatgttcctctccagttccagagtttgaataaaaggaaaaaggccaaaatg
caaggacagtttaaaaatttagtgaaaggtgcaaaaaagggagctatgaaaggaacaaaa
aagaagcataaaaagtga
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