Mytilus californianus (California mussel): 127737231
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Entry
127737231 CDS
T08804
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mcaf
Mytilus californianus (California mussel)
Pathway
mcaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127737231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcaf04121
]
127737231
Enzymes [BR:
mcaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127737231
Ubiquitin system [BR:
mcaf04121
]
Ubiquitin ligases (E3)
HECT type E3
127737231
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WWE
Arm
HEAT_2
UNC45-central
Motif
Other DBs
NCBI-GeneID:
127737231
NCBI-ProteinID:
XP_052103724
LinkDB
All DBs
Position
Unknown
AA seq
1996 aa
AA seq
DB search
MADQPEFQSGGSHRRRHHSGADSKVEVGQTNNISQSVLIKKKKSKKRFAPSSQEGPTTSK
QSKLSGTGLKPSKKEKLRNKKEKIRKKKNKKSKLQAVAVNAETIDTKQTEEKDSDTNKYT
ISKNLRSNLEAEVVPGIPYYPERSRSVSGTRSRDRKSSFNSLEDIKIKVVGKSVDTSQGT
QDIQVDIAHTSVQNPQSTHPSKKSRSDKKKRKSKERRSSSTSSKSLSPELDSLRRTRRSK
TGSCASSSGRRSASSSKRPAGSSSLLNTAGGSESGTSRGGAKPQNSSSLMSGQEDNTDNG
GGRPREEGGSQPSLAASNAAGATAMTSESETEEGDMGRLQALLEARGLSSTLFNTLGPRM
HQILHRTMGGGAMSKAQQLLQGLQATGNEDQQLSAAIEMCQLLVMGNEDTLAGFPVKQAV
PALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAVPVFLEKLRAIQCMDVAEQS
LTALEMLSRRHSKAILQAGGISACLMFLDFFSITAQRSALAVTANCVQNLTAEEFHFVRE
SLPLLSSKLTHQDKKSVESCCLCFSRLVDNFSSDQRVLKEMSAHGLLTNIQQLLVVSPPV
ISTGIFVMVIRMLAIMCASCPDLAVVLLKQKIADTLCYLLVGTSEQTENVVELVSRTPQE
LYEIVCLIGELMPKLPTDGIFSIDQMLRKGSFTQTEAVMWQWRDDRSIWHHYTAIDSKIV
EAAYQAGEDEVSLSTMGRSYTIDFNSLQQINEDTGTARPVQRKLNSFGVPQPTGSSTTTT
PSSSSTTTTDPLVDRCDSRAEILKEDMELASAFIQTLFSVLYEVYSSSAGPTVRHKCLQT
LLRMIFYAGADLLRSILQTQPVSSHIAAMMASNDLKVVVAAVQMAEILMQKLPDVFSIYF
RREGVMHQIKKLTEIDPQAPSPVKASPSPSTSIPPPTSVSSSSASITSSSTSSESIDKKL
DGASNVAASSSTSEEHSSSQMRLSDVLKRKKPPKRSLGRKCKNTDESPTDTPTKGSPAVG
NRSSNRAKSAGKEGKSSSKMSFLPSSLNPRTWGKFSSSSDQQPKSGLSKVGQPRLLTSLT
RSDAFSPKPVLITSPCNKEKVKSWVKEQASRFIEQYFGTETQGSSHPALNILNRLCTATE
LLTVEDDCGIDCLKEIANIMKDSDVSPFEIIHSGLVQKLLQYLTSTTGDVPRDVRIRRFL
HIFLNCPPPDVLHCKEVHVDSENLPSMTALVAKLIGCLHQLEQFQVKVHDLPGGSASSGR
GSNALRFFNTHQLKCNLQRHPECTTLRQWKGGPVKIDPLALVQAIERYLVVRGYGRPKPE
GADDDISDDDNSDEDVDDTMAAVFISQGTARHKLEFYMGERFLPYNMTVYQAIKNYSNPG
EKDASETDTDSEIPLGHAGIWVQTHTIWYKQAADQDTVTSPKKTKSEHHSKSKGRKKVDD
LWNDGHCPVMVPALNAYLTDKLPAFVTVMDPSLDVIALLRILHAFNNYWSTMYEVPFSHK
PIMSFNEFLSSKLTAKANRQLQDPLVIMTGNLPNWLAEIANAAPFMFPFETRQLLFYATT
FDRDRALMRLQDNTGDNSSNDNNERVAPRLDRRRRVVNRSDLLKQAEKVIDELGNSKALL
EIQYENEVGTGLGPTLEFYALVSKELQKSEFELWRGESLVEKNSSENEHATEYSFSICGL
FPAPLARNAKAAIVNRIKSKFKFLGKFMAKALMDSRMLDLPLSLVFYKWMLGQEHSLTSA
DLQFIDPVIAKSFQQLEDILRQKHRILADKSHTEESRQLALESLSMDGCSIEDLDIDFTL
PGYSHIELKKGGKDIPVTLDNLEEYLQLVVHWSLVEGVSRQFEAFREGFESVFHMSSLQS
CYPDELEQLFCGNVTEPWDTKMLLECCRPDHGYTHDSRAVKSLFENLSSYDINEQREFLQ
FVTGSPRLPVGGFRSLNPPLTIVRKTFETNDNPDSFLPSVMTCVNYLKLPDYSSAQIMRE
KLQKAAKEGQLSFHLS
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccaacctgagttccagtctggggggtcacatagaagaagacaccattctggg
gcagattcaaaagttgaagtaggccaaaccaataacatttcacagtctgttttaatcaag
aagaagaaatcaaagaagcgatttgcaccaagttcacaggaaggtccaactaccagtaaa
caaagtaaattgtcaggaacaggtttgaaaccatcaaagaaagagaaattaagaaataaa
aaagagaaaattaggaagaagaaaaataaaaaatctaaattacaagctgtagctgtgaac
gctgaaaccatagacacaaaacaaacagaggaaaaagactctgatactaataaatataca
atttccaaaaatctaagatcaaacttagaggcagaagtagttccagggataccttattat
ccagaaaggtcaaggtcagtgtctggaactagaagtcgggacaggaaaagcagtttcaat
agtttagaggatattaaaataaaagttgttgggaaaagtgtagacacaagccaaggaact
caagacattcaggtggatattgctcatactagtgttcaaaacccacaaagtactcatcct
tcaaagaaatctagaagtgacaagaagaagaggaaaagcaaggaaagacgctctagtagt
actagttctaaatccttgtcgccggagcttgatagcttacggcgcactcgaagaagcaaa
acgggatcgtgtgctagtagcagtggtaggcgttccgcttcatcatcaaagcgtcctgct
ggtagcagcagtctcctaaatacagcaggtgggagtgagagcgggacatccagaggggga
gccaaaccacaaaacagcagtagcctgatgtcaggacaagaagataatactgataatgga
ggaggtagacctcgggaagaaggtggcagtcagccttctctggcagcatcaaatgctgcc
ggggctacagctatgacttccgagagtgagacagaagaaggagatatgggaagattgcaa
gcattattagaagctagaggattgtcatcaactttattcaacacactaggacccagaatg
catcagattttacacagaactatgggaggaggagcaatgagtaaagcccagcaattattg
caaggtttacaagcaacagggaatgaggaccaacaactgtctgcagctattgaaatgtgt
cagttgttggttatgggaaatgaagatacattggcaggattcccagtaaaacaagcagta
ccagcactgattacactgttacaaatggaacataattttgatattatgaaccatgcttgt
cgagccttgacctacatgatggaagctctacccaggtcatcagctgttgttgttgatgct
gtgcctgtattccttgagaaactaagagcaatacagtgtatggatgttgctgagcagtcc
ttaacagcattagaaatgttatcaagaagacacagtaaagcaatattacaagctggaggt
atttcagcatgtctgatgtttctggacttctttagtattacagcacagagaagtgctcta
gcagtgacggccaactgtgtacagaatcttacagcagaagagttccactttgtcagagaa
tctctaccattactcagttcgaaactcacccatcaggataagaagtctgtggagagttgc
tgtttatgtttctctcgattggttgataattttagcagtgatcagagagtactgaaggaa
atgtcagctcatggattgttaactaatattcaacagctcttggttgtgagcccacctgtc
ataagtactggtatctttgttatggtgatcagaatgttagcaataatgtgtgctagttgt
cctgatctagccgttgttcttctcaaacagaaaatagctgataccttatgctaccttttg
gtcggaacttctgaacagactgaaaatgttgttgagttggtatctaggacaccacaggag
ctgtatgagattgtttgtcttattggggaattaatgcccaagttaccaactgatggtata
ttttccattgatcaaatgttacgtaaaggatcctttactcaaaccgaggcagtcatgtgg
caatggagggatgataggagtatctggcatcattatacagcaatagatagtaaaattgta
gaggcagcatatcaagctggagaagatgaagttagtttatctactatgggcaggtcatat
acaatagactttaattccttgcaacagattaatgaagacacaggcacagctcgacctgta
cagaggaagcttaattcatttggtgtcccacagcctacaggttcctcaaccactacaacg
ccatcatcatcatccactacaaccacagatccactggtagacagatgtgattctagagct
gaaattctaaaggaggacatggaattagcctcagccttcatacaaactctcttctctgtc
ttgtatgaagtctatagttcatctgctggtcctacagtacgacacaagtgcctacagaca
ttattacgaatgatattctatgctggagcagacctgttgagaagtattttacaaacacag
cctgtctccagccacattgctgccatgatggcatctaatgacttaaaagttgttgtagct
gctgttcagatggcagaaatactgatgcaaaaattaccagatgttttctccatatatttt
agaagagaaggtgttatgcatcagataaagaagttaacagaaatagatccccaggcccca
tcccctgtcaaggcttcgccttcaccatccacatccatccccccaccaacatctgtgtct
agttcgtcagcaagtatcacaagcagtagcacatcatcagaaagtattgataaaaaatta
gatggagcatcaaacgttgctgcatcatcttctacgtcagaggaacacagttcttctcaa
atgagactaagtgatgtattaaaaaggaagaaaccaccaaaaaggtcactgggtcgtaaa
tgtaaaaatacagatgaatctcctacagataccccaactaaaggatctcctgcagtggga
aacagaagttctaatagggcaaaatctgcagggaaggaagggaaatcaagttcaaagatg
tctttcttaccaagtagtttaaatccacgaacatggggaaagttttcttcttcatcagat
cagcaacccaaatctggcttgtcaaaggttggtcaaccgagacttttgaccagtctcacc
agaagtgatgcatttagtcctaaacctgtgctgataaccagcccatgcaacaaagagaaa
gttaaatcttgggttaaagagcaagcatctcgatttatagaacagtattttggtaccgag
acccaaggatcaagtcatcctgctctcaatatactcaacagactatgtactgccactgaa
cttttaacagtagaggatgattgtggaatagattgtctgaaagagatagctaatataatg
aaggacagtgatgtgtctccatttgaaataatacatagtggactagttcagaaactttta
cagtatttaacttccacgacaggtgatgtaccacgagatgtccgaatcagaagatttcta
catatattccttaactgccctcctccagatgtattacattgtaaagaggtacacgtagat
tctgaaaacctaccatcaatgactgcattggttgccaaattgattggttgtttgcaccag
ttagaacagttccaggtcaaagttcatgatttacctggtggcagtgcatccagtgggaga
ggttctaatgccttgagattcttcaatacacatcaattaaagtgcaatctacaaagacac
cctgaatgtacaacattgcgacagtggaagggaggacctgtgaagattgatccattagcc
ttggtacaggctatagagagatacctagtagttagggggtatggtcgtcctaaacctgag
ggtgccgatgatgatataagtgatgatgataattctgatgaagatgttgatgatactatg
gctgctgtatttatcagtcaaggcacagccagacataagttagaattttacatgggagag
cgttttctaccttacaacatgacagtgtatcaagccattaaaaactacagcaatcctggg
gagaaggatgcaagtgaaactgatacagattcagaaattcctcttggtcatgctggtatt
tgggtacagacccatacaatatggtacaagcaggctgctgaccaggatacagttaccagt
ccaaagaaaactaaatctgaacaccacagtaaatctaaagggaggaaaaaagtggatgat
ttatggaatgacggtcactgtcctgtgatggttcctgcattaaatgcttacttaacagac
aaactgccagcctttgtaacagttatggatccttctcttgatgttatagctctacttaga
atattacatgccttcaataattattggtctactatgtatgaggtgccattttctcacaaa
cctattatgtctttcaatgagttcttaagttcaaaattaacagccaaagctaacagacag
ctacaagacccactggtgattatgacaggcaatttgcctaactggttggcagagatagcc
aatgcagcaccattcatgtttccttttgaaactcgtcagttattattttatgccacaacg
tttgacagagatcgagccctaatgagactacaagataacactggtgacaatagctcaaat
gataataatgagagagtagctcccaggcttgatagaagaaggcgagttgtaaaccggtca
gatttgttaaaacaagcagagaaagttattgatgaactgggtaattctaaagccttactg
gaaattcaatacgagaacgaggttggaacaggtctaggaccaactttagaattttatgca
ttagtatcaaaagaattacagaaatcagaatttgaattgtggagaggtgaatctttagta
gagaaaaactcttcagaaaatgaacatgctacagaatatagtttctccatctgtggactg
ttcccagcaccactggcacgcaatgctaaggctgccattgtcaatagaattaaatctaag
tttaaattcttaggcaagtttatggctaaagcattaatggactccagaatgctggactta
ccattgtccctggttttctacaaatggatgttaggacaagaacacagccttacatcagct
gatctacagtttatagatcctgtcattgccaagtctttccaacagttagaggatattctc
aggcaaaaacacagaatacttgctgataaatcacatactgaggagagtcgccagttagcc
ctggaaagtttaagtatggatggctgtagtatagaagacctagatattgactttacactc
ccaggttatagtcacatagaattgaagaaaggaggcaaggatatacctgtcacattagat
aaccttgaggaatacttgcagttggtagtccattggagtttagttgaaggtgtgtccaga
cagtttgaagcatttagagaaggatttgaatctgtatttcatatgtcatcactacagagt
tgttatcctgatgagctggagcagttattctgtggtaatgttacagaaccctgggataca
aagatgttgttagaatgttgccgaccagatcatggttatacacacgacagtcgtgctgtt
aaatccttgtttgagaatctgagttcatatgatatcaatgaacagagggaatttctacag
tttgttaccgggtcacctcgtcttccagttggaggttttagaagtctgaatcctccattg
acaatagtcagaaagacatttgaaaccaacgataatccagacagttttctgccttctgtg
atgacatgtgttaattatctcaaattacccgactattcatctgcacaaatcatgcgagaa
aaactacaaaaagctgcaaaagaaggacaactctcattccatttgtcataa
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integrated database retrieval system
